mRNA_S-dermatodea_contig8288.16476.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
|
Overview
Homology
BLAST of mRNA_S-dermatodea_contig8288.16476.1 vs. uniprot
Match: D8LRX0_ECTSI (Vps8 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRX0_ECTSI) HSP 1 Score: 404 bits (1037), Expect = 4.900e-123 Identity = 247/362 (68.23%), Postives = 274/362 (75.69%), Query Frame = 1
Query: 1 EQRRAAPRSEAAEHISDLLAQYLRLAINNAPAXXXXXXXXXXXXXXXXXXXXXXXXX----GESRINLAQSHFQMLAGVCTEFCAVTGRLDMLFGQVFHAFRARGQQRVFLDTLEPYVLMGKLRRLSAEVLGAFVDRCQSGGDMLAAERLVLRLEPRSLDLATTLPLLRRHRLHSALLAVRAWRGDHVSSVDEILREVMSIADRDHAPVSIHPAPLGELGAGSGSIDGGGGGVVLCPFPADPTFDELGYKVLLYLTRCFQGRVLGGAEPMSADETARARANLLRLLVRPSLLPSATPT--SDGSSATDA--------PRP-----RWRGALFPYLAVLLYVDAAAAIDVLSVAMVSPDAVFR 1029
EQRR APRSEAAEHISDLLAQYLRLA+NNAPA XXXXXXXXXXXXXXXXX G RINLA SHFQMLAGVC EFCAVTGRLDMLFGQ+F AFRARGQQ VFLDTLEPYVLMGKL+ LS EV+ AF+DRCQS GDM+AAERLVLRLEPRSL+L TTLPLLR HRLHSALLAV A GDHVSS +E+LRE MSIA+RD P ++L P+PADPTFDELGYKVLLYL RCF+GRVLG +EP+SA +TA+ARA+LL LLVRP+L+ S++ + + G +A DA RP RW+ ALFPYLAVLLYVDA A IDVLSVAM SPDA F
Sbjct: 774 EQRRPAPRSEAAEHISDLLAQYLRLAMNNAPAADSSSRHSXXXXXXXXXXXXXXXXXAGSPGGPRINLAHSHFQMLAGVCAEFCAVTGRLDMLFGQIFQAFRARGQQGVFLDTLEPYVLMGKLKTLSPEVISAFIDRCQSAGDMIAAERLVLRLEPRSLELETTLPLLRGHRLHSALLAVGALTGDHVSSAEEVLREAMSIAERDRLRAPRPPXXXXXXXXXXXXXXXXXXXLLLHPYPADPTFDELGYKVLLYLKRCFRGRVLGASEPLSAADTAKARASLLHLLVRPALMQSSSSSLGAAGVAAADAGGRRAGGSKRPWGGDRRWQEALFPYLAVLLYVDAGATIDVLSVAMDSPDATFH 1135
BLAST of mRNA_S-dermatodea_contig8288.16476.1 vs. uniprot
Match: A0A6H5JMF4_9PHAE (Vps8 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMF4_9PHAE) HSP 1 Score: 404 bits (1037), Expect = 2.240e-122 Identity = 240/358 (67.04%), Postives = 271/358 (75.70%), Query Frame = 1
Query: 7 RRAAPRSEAAEHISDLLAQYLRLAINNAPAXXXXXXXXXXXXXXXXXXXXXXXXXGESRINLAQSHFQMLAGVCTEFCAVTGRLDMLFGQVFHAFRARGQQRVFLDTLEPYVLMGKLRRLSAEVLGAFVDRCQSGGDMLAAERLVLRLEPRSLDLATTLPLLRRHRLHSALLAVRAWRGDHVSSVDEILREVMSIADRDHAPVSIHPAPLGELGAGSGSIDGGGGGVVLCPFPADPTFDELGYKVLLYLTRCFQGRVLGGAEPMSADETARARANLLRLLVRPSLLPSATPT--SDGSSATDAP----------RP-----RWRGALFPYLAVLLYVDAAAAIDVLSVAMVSPDAVFR 1029
RR PRSEAAEHISDLLAQYLRLA+NNAP XXXXXXXXXXX G RINLA SHFQMLAGVC EFCAVTGRLDMLFGQ+F AFRARGQQ VFLDTLEPYVLMGKL+ LS EV+ AF+DRCQS GDM+AAERLVLRLEPRSL+L TTLPLLR HRL+SALLAV A GDHVSS +E+LRE MSIA+RD +P P G+ G G +G +L P+PADPTFDELGYKVLLYL RCF+GRVLG AEP+SA +TA+ARA+LL LLVRP+L+ S++ + + G +A DA +P RW+ A FP+LAVLLYVDA A IDVLSVAM SPDA FR
Sbjct: 994 RRPTPRSEAAEHISDLLAQYLRLAMNNAPGADSSSLHSTAAXXXXXXXXXXXGSPGGPRINLAHSHFQMLAGVCAEFCAVTGRLDMLFGQIFQAFRARGQQGVFLDTLEPYVLMGKLKTLSPEVISAFIDRCQSAGDMIAAERLVLRLEPRSLELETTLPLLRGHRLYSALLAVGALTGDHVSSAEEVLREAMSIAERDRLRAP-NPPPCGDGGQGG---EGYRQQQLLHPYPADPTFDELGYKVLLYLKRCFRGRVLGAAEPLSAVDTAKARASLLHLLVRPALMQSSSSSLGASGVAAADAATGGRRMGGSSKPWGGDRRWQEAPFPHLAVLLYVDAGATIDVLSVAMDSPDATFR 1347
BLAST of mRNA_S-dermatodea_contig8288.16476.1 vs. uniprot
Match: A0A836CF74_9STRA (Golgi CORVET complex core vacuolar protein 8-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CF74_9STRA) HSP 1 Score: 191 bits (486), Expect = 3.370e-49 Identity = 139/342 (40.64%), Postives = 196/342 (57.31%), Query Frame = 1
Query: 37 EHISDLLAQYLRLAINNAPAXXXXXXXXXXXXXXXXXXXXXXXXXGE-SRINLAQSHFQMLAGVCTEFCAVTGRLDMLFGQVFHAFRARGQQRVFLDTLEPYVLMGKLRRLSAEVLGAFVDRCQSGGDMLAAERLVLRLEPRSL-DLATTLPLLRRHRLHSALL-AVRAWRGDHVSSVDEILREVMSIADRDHAPVSIHPAPLGELGAGSGSIDGGGGGVVLCPFPADPTFDELGYKVLLYLTRCFQGRVLGGAEPMSADETARARANLLRLLVRPS-----LLPSATPTSDGSSATDAPRPRWRGALFPYLAVLLYVDAAAAIDVLSVAMVSPDAVFRNPG 1038
E ++ LL++Y+RLA++NAP+ XXXXXXXXXXXXXX GE +R LA+SHFQMLAGVC E+C VT R D+LFG+V F+ G + FL+TLEPYVL +L L + L + GD ER L L +L + L LLRR L++ALL A A GD++++++ +L++ M++ADR+HA ++ P +G+ CP+P DP D LGYK LLYL CF+G G E + A RA LL LL + + L PS +AP P W+ + +PYL +LLY+D ++ L++A+ SP+A F + G
Sbjct: 113 ESLAALLSRYVRLAVDNAPSAAXXXXXXXXXXXXXXRQ-------GEGARGRLAKSHFQMLAGVCAEYCVVTERADVLFGEVLERFKEAGYTQTFLETLEPYVLEERLHTLQSTALREVAEHTLHSGDSQMLERWALHLNAAALAESPGALALLRRRGLYTALLRACGAGAGDYLAALEALLQDAMALADREHAHRAVAEIP--RVGS-EPETPSAAAPPRDCPYPPDPQLDALGYKALLYLRHCFRGAAFPGGEALGAALLPAVRAQLLYLLFQRAISAGGLRPSMADPPLSPPPPEAP-PVWKASPYPYLRILLYIDTPLTLETLAIALDSPEAEFEDGG 443
BLAST of mRNA_S-dermatodea_contig8288.16476.1 vs. uniprot
Match: A0A7S2VA50_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2VA50_9STRA) HSP 1 Score: 167 bits (423), Expect = 5.400e-41 Identity = 114/332 (34.34%), Postives = 163/332 (49.10%), Query Frame = 1
Query: 19 PRSEAAEHISDLLAQYLRLAINNAPAXXXXXXXXXXXXXXXXXXXXXXXXXGESRINLAQSHFQMLAGVCTEFCAVTGRLDMLFGQVFHAFRARGQQRVFLDTLEPYVLMGKLRRLSAEVLGAFVDRCQSGGDMLAAERLVLRLEPRSLDLATTLPLLRRHRLHSALLAV-RAWRGDHVSSVDEILREVMSIADRDHAPVSIHPAPLGELGAGSGSIDGGGGGVVLCPFPADPTFDELGYKVLLYLTRCFQGRVLGGAEP-MSADETARARANLLRLLVRPSLL-PSATPTSDGSSATDAPRPRWRGALFPYLAVLLYVDAAAAIDVLSVAM 1005
P+ E E I+ LL +YL LA++NAP G +RINLAQSHFQMLAGVC E+C T RLD+LFG +F F + G VFLD LEPYVL +L ++ EV+ FV+ C+S + ER +L ++ +D + + LLR + ++SA+ V D+VS + +L V AD +A + P GE FD GYK +LYL CF+G+ E +S D A + LL L + + PS P + G A++ R R L+PY+ +L+ VD A + +S A+
Sbjct: 142 PKGEEEEWIAKLLMRYLNLAVDNAPTSSTDDNLISLGN-------------GRARINLAQSHFQMLAGVCVEYCVTTKRLDLLFGPIFRRFHSVGYTAVFLDVLEPYVLNDRLSYIAPEVMSYFVEHCKSNNGVATVERCLLHMDCTIMDFDSIIALLRNNDMYSAMFFVFNQGLNDYVSPLQMLLERVFEEADAGNALLR---RPTGER-------------------RRQNDFDRFGYKAILYLRFCFEGKSFPKEEKILSEDVQASVKPELLNFLTQATYSSPSHAPRTAGGEASE--RVGHRSYLYPYMRLLVQVDPALLFETISGAL 436
BLAST of mRNA_S-dermatodea_contig8288.16476.1 vs. uniprot
Match: A0A7S2A0P8_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2A0P8_9STRA) HSP 1 Score: 159 bits (401), Expect = 4.300e-38 Identity = 106/336 (31.55%), Postives = 161/336 (47.92%), Query Frame = 1
Query: 25 SEAAEHISDLLAQYLRLAINNAPAXXXXXXXXXXXXXXXXXXXXXXXXXGESRINLAQSHFQMLAGVCTEFCAVTGRLDMLFGQVFHAFRARGQQRVFLDTLEPYVLMGKLRRLSAEVLGAFVDRCQSGGDMLAAERLVLRLEPRSLDLATTLPLLRRHRLHSALLAVRAWR-GDHVSSVDEILREVMSIADRDHAPVSIHPAPLGELGAGSGSIDGGGGGVVLCPFPADPTFDELGYKVLLYLTRCFQGRVLGGAEPMSADETARA-RANLLRLLVRPSLLPSATPTSDGSSATDAPRPRWRGALFPYLAVLLYVDAAAAIDVLSVAMVSPDAVF 1026
S+ E I+DLL +YL LA+ NAP +RI+LAQSHFQMLAGVC EFC VT RLD+LFG +F F++ VFLD LEPYVL KL ++ + + FV+ C++ D+ ER +L ++ +D + L LLR++ ++SALL V A D ++ ++ ++ + AD P L + F++ GYK +LYL CF+G+ + +E R +L L + PS + T + R +PY+ VL+ VD+ A + L++A+ +P A F
Sbjct: 282 SDDEEWIADLLLRYLNLAVENAPEPSTEQPGTRSAVSRL----------SSTRIDLAQSHFQMLAGVCIEFCVVTRRLDLLFGPIFRRFQSVHYTNVFLDVLEPYVLNDKLHYIAPDAMAQFVEHCKASNDVATVERCLLHMDVTIMDFDSILSLLRKNDMYSALLHVFAHGLNDFITPLEILMEAIFDAADTFDLNT---PRRLDGVHQNK--------------------FEQYGYKAILYLQHCFKGQTFPQGRDLKPEERVETLRPQILTFLQQEQYSPSISVTKSDVVMRKSHSTGLRACAYPYMHVLMLVDSKALLTTLTLALDAPGAKF 584
BLAST of mRNA_S-dermatodea_contig8288.16476.1 vs. uniprot
Match: A0A1E7FY24_9STRA (Vps8 domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FY24_9STRA) HSP 1 Score: 157 bits (396), Expect = 2.100e-37 Identity = 113/338 (33.43%), Postives = 160/338 (47.34%), Query Frame = 1
Query: 22 RSEAAEHISDLLAQYLRLAINNAPAXXXXXXXXXXXXXXXXXXXXXXXXXGESRINLAQSHFQMLAGVCTEFCAVTGRLDMLFGQVFHAFRARGQQRVFLDTLEPYVLMGKLRRLSAEVLGAFVDRCQSGGDMLAAERLVLRLEPRSLDLATTLPLLRRHRLHSALLAV-RAWRGDHVSSVDEILREVMSIADRDHAPVSIHPAPLGELGAGSGSIDGGGGGVVLCPFPADPTFDELGYKVLLYLTRCFQGRVLGGAEPMSADETARARANLLRLLVRPSLLPSATPTSDGSSATDAPRPRWRGALFPYLAVLLYVDAAAAIDVLSVAMVSPDAVFRN 1032
R+E E I+ LL +YL +A+ NAP +S+++LA+SHFQMLAGVC EFC VT RLD+LFG +F F A VFLD LEPY+L KL ++ E + FV+ C++ + ER +L ++ +D T L LLR + ++SAL + D+ + ++ + + AD +G+L IDG + F+ GYK +LYL F+GR M+ + R LLR L LL TP+ S T R +PY +LL VD A D LS AM +PD FR+
Sbjct: 675 RTEDEEWIAKLLIRYLNIAVENAPETTNDFNFPPEIR--------------QSQMDLARSHFQMLAGVCIEFCVVTKRLDLLFGPIFRRFHAAEVLSVFLDVLEPYILNDKLDYIAPEAMMHFVEHCRTNNGIATVERCLLHMDVTIMDFDTILNLLRANEMYSALFYIYNQGLNDYTTPLEILCESIFDAADT-----------VGQL-TNERRIDG----------ISQNDFERFGYKAILYLQSTFRGRYFPKETEMAEECLRTVRPQLLRFL----LLSRYTPSRSIKSPTQVIGQR--ALRYPYAHILLMVDPKAMFDTLSTAMDAPDEQFRH 970
BLAST of mRNA_S-dermatodea_contig8288.16476.1 vs. uniprot
Match: A0A448Z7P9_9STRA (Vps8 domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z7P9_9STRA) HSP 1 Score: 153 bits (387), Expect = 3.220e-36 Identity = 108/339 (31.86%), Postives = 158/339 (46.61%), Query Frame = 1
Query: 25 SEAAEHISDLLAQYLRLAINNAPAXXXXXXXXXXXXXXXXXXXXXXXXXGESRINLAQSHFQMLAGVCTEFCAVTGRLDMLFGQVFHAFRARGQQRVFLDTLEPYVLMGKLRRLSAEVLGAFVDRCQSGGDMLAAERLVLRLEPRSLDLATTLPLLRRHRLHSALLAV-RAWRGDHVSSVDEILREVMSIADRDHAPVSIHPAPLGELGAGSGSIDGGGGGVVLCPFPADPTFDELGYKVLLYLTRCFQGRVLGGAEPMSADETARARANLLRLLVRPSLLPSATPTSDGSSATDAPRPRWRGALFPYLAVLLYVDAAAAIDVLSVAMVSPDAVFRNPG 1038
+E E I+ LL +YL +A+ NAP ES+++LA+SHFQMLAGVC EFC VT RLD+L+G +F F + G VFLD LEPY+L KL ++ E + FV+ C++ + ER +L ++ +D T L LLR + ++SAL + D+ + ++ + + AD LG++ IDG F D F+ GYK +LYL F G+ M+ + R LL+ L++ PS + + R +PY +LL VD A D LS AM +PD F G
Sbjct: 976 TEDEEWIAKLLIRYLNIAVENAPETNNDFNFPPEIR--------------ESQMDLARSHFQMLAGVCVEFCVVTKRLDLLYGPIFRRFHSAGFLSVFLDVLEPYILNDKLNYIAPEAMMHFVEHCRTNNGIATVERCLLHMDVTIMDFDTILNLLRANEMYSALFYIYNQGLMDYTTPLEILCESIFDAADT-----------LGQI-TNERRIDG--------VFQND--FERFGYKAILYLQNIFSGKNFPKGTAMAEETVHTVRPQLLKFLLQSRYKPSRSIRAPAQVIGQ------RALRYPYAHILLMVDPKAMFDTLSTAMDAPDKEFNTNG 1272
BLAST of mRNA_S-dermatodea_contig8288.16476.1 vs. uniprot
Match: B7FQM2_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FQM2_PHATC) HSP 1 Score: 149 bits (376), Expect = 8.300e-35 Identity = 106/329 (32.22%), Postives = 156/329 (47.42%), Query Frame = 1
Query: 22 RSEAAEHISDLLAQYLRLAINNAPAXXXXXXXXXXXXXXXXXXXXXXXXXGESRINLAQSHFQMLAGVCTEFCAVTGRLDMLFGQVFHAFRARGQQRVFLDTLEPYVLMGKLRRLSAEVLGAFVDRCQSGGDMLAAERLVLRLEPRSLDLATTLPLLRRHRLHSALLAV-RAWRGDHVSSVDEILREVMSIADRDHAPVSIHPAPLGELGAGSGSIDGGGGGVVLCPFPADPTFDELGYKVLLYLTRCFQGRVLGGAEPMSADETARA-RANLLRLLVRPSLLPSATPTSDGSSATDAPRPRWRGALFPYLAVLLYVDAAAAIDVLSVA 1002
+ E E I+ LL +YL LA+ NAP ++RI+LAQSHFQMLAGVC +FC VT RLD+LFG +F F+ G +FLD LEPYVL +L ++ EV+ FV+ C+S + ER +L ++ ++D T + LL + + +AL V D V+ + + ++ AD A +S + F+ GYK +LYL CF+G+ E + DE + + LL LL+R PS G + + R L+PY+ + L VD AA+D LS+A
Sbjct: 779 KGEDHEWIAKLLMRYLNLAVENAPDSSANQPWSPGSI--------------DARIDLAQSHFQMLAGVCVDFCVVTRRLDLLFGPIFRRFQHVGYTDIFLDVLEPYVLNDRLTYIAPEVMNHFVEYCRSHNGIATVERCLLHMDCTAMDFDTIISLLMVNEMFTALFFVFNQGLNDFVTPLQMLFEKLFEEADTGKALLSRRRNGTPQN-----------------------RFERYGYKAILYLQTCFRGKTFPVEESIVPDERRGSLKRELLELLMRKDYNPSPHSMHSGENNVVIGQ---RAQLYPYMKIFLQVDPRAALDSLSLA 1067
BLAST of mRNA_S-dermatodea_contig8288.16476.1 vs. uniprot
Match: A0A7S3PW51_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PW51_9STRA) HSP 1 Score: 146 bits (369), Expect = 6.840e-34 Identity = 104/336 (30.95%), Postives = 153/336 (45.54%), Query Frame = 1
Query: 25 SEAAEHISDLLAQYLRLAINNAPAXXXXXXXXXXXXXXXXXXXXXXXXXGESRINLAQSHFQMLAGVCTEFCAVTGRLDMLFGQVFHAFRARGQQRVFLDTLEPYVLMGKLRRLSAEVLGAFVDRCQSGGDMLAAERLVLRLEPRSLDLATTLPLLRRHRLHSALLAVRAWR-GDHVSSVDEILREVMSIADRDHAPVSIHPAPLGELGAGSGSIDGGGGGVVLCPFPADPTFDELGYKVLLYLTRCFQGRVLGGAEP-MSADETARARANLLRLLVRPSLLPSATPTSDGSSATDAPRPRWRGALFPYLAVLLYVDAAAAIDVLSVAMVSPDAVF 1026
+E E I+DLL +YL LA+ NAP +RI+LAQSH+QMLAGVC EFC VT RLD+LF +++ F G +FLD LEPYVL K++ ++ V+ F+D C+ D+ ER +L ++ +D + L LL+++ ++SAL+ + D VS + + + D SG + G GYK+LL++ CFQG++ P M D R LL L+R SA T +R +PYL VL+ +D+ A L++ PDA F
Sbjct: 985 TEDEEWIADLLLRYLHLAVENAPDPAVEPSSPFHRRG--------------ARIDLAQSHYQMLAGVCIEFCVVTRRLDLLFNEIYQRFLDTGYTWIFLDVLEPYVLNDKVKYIAPLVMADFIDHCREANDVATVERCLLHMDVTIMDFDSILSLLQKNSMYSALIYIYTQGLDDFVSPLIILFEGLFDALD-------------------SGDVSNG---------------KAYGYKILLFMQHCFQGKLFPTGSPLMPEDRLNTLRPELLTCLIRKVYTSSAISQPMNDIGTKG----YRLEAYPYLRVLVNLDSKAFFSTLALVFDDPDACF 1268
BLAST of mRNA_S-dermatodea_contig8288.16476.1 vs. uniprot
Match: A0A1Z5K8H4_FISSO (Vps8 domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K8H4_FISSO) HSP 1 Score: 143 bits (361), Expect = 7.140e-33 Identity = 107/338 (31.66%), Postives = 157/338 (46.45%), Query Frame = 1
Query: 10 RAAPRSEAAEHISDLLAQYLRLAINNAPAXXXXXXXXXXXXXXXXXXXXXXXXXGESRINLAQSHFQMLAGVCTEFCAVTGRLDMLFGQVFHAFRARGQQRVFLDTLEPYVLMGKLRRLSAEVLGAFVDRCQSGGDMLAAERLVLRLEPRSLDLATTLPLLRRHRLHSALLAV-RAWRGDHVSSVDEILREVMSIADRDHAPVSIHPAPLGELGAGSGSIDGGGGGVVLCPFPADPTFDELGYKVLLYLTRCFQGRVLGGAEPMSADETAR-ARANLLRLLVRPSLLPSATPTSDGSSATDAPRPRWRGALFPYLAVLLYVDAAAAIDVLSVAMVSPD 1017
RA + E ++ LL +YL LA+ NAP +L++SH+QMLAGVC EFC+VT + ++LFG VF F++ G +F D LEPYVL K+ +SAE + FV+ C+ +L ER +L ++ +D T L LLRR+ +++AL V D+VS ++ +L V AD AGS + GV F+ LGYK LLYL CF G+ + + DE + R +LL L S A R +PY+ +LL VDA A +D +++A+ + D
Sbjct: 759 RAKGEDDEEEWLAKLLVRYLNLAVENAPDVSHIPASARVSINGGN--------------DLSRSHYQMLAGVCVEFCSVTRKPELLFGPVFQKFQSAGFSSIFFDVLEPYVLNDKIPYISAEAMSYFVEHCKMTKSILTVERCLLHMDCSIMDFDTILSLLRRNAMYTALFYVYNNGLDDYVSPLEIVLNRVFEEAD-----------------AGSALLKRREDGV------PQTDFETLGYKALLYLKSCFIGKTFPREDELLPDEKCKKVRQDLLTFLASKKYQSSFAKKDKQEIAGH------RALNYPYMRLLLLVDARATLDAVALALNTED 1053 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig8288.16476.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig8288.16476.1 >prot_S-dermatodea_contig8288.16476.1 ID=prot_S-dermatodea_contig8288.16476.1|Name=mRNA_S-dermatodea_contig8288.16476.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=473bp EQRRAAPRSEAAEHISDLLAQYLRLAINNAPAPEPQGLGVGGGQGFPAGGback to top mRNA from alignment at S-dermatodea_contig8288:769..6150- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig8288.16476.1 ID=mRNA_S-dermatodea_contig8288.16476.1|Name=mRNA_S-dermatodea_contig8288.16476.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=5382bp|location=Sequence derived from alignment at S-dermatodea_contig8288:769..6150- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig8288:769..6150- >mRNA_S-dermatodea_contig8288.16476.1 ID=mRNA_S-dermatodea_contig8288.16476.1|Name=mRNA_S-dermatodea_contig8288.16476.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=2838bp|location=Sequence derived from alignment at S-dermatodea_contig8288:769..6150- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |