mRNA_S-dermatodea_contig8286.16474.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig8286.16474.1 vs. uniprot
Match: A0A6H5KAV5_9PHAE (Kinesin-like protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAV5_9PHAE) HSP 1 Score: 160 bits (404), Expect = 8.080e-46 Identity = 80/87 (91.95%), Postives = 85/87 (97.70%), Query Frame = 2
Query: 2 RKREGIQINQGLLALGNVVNALGDERLEKKSVHVPYRQSKLTRLLQDALGGNSQTLFIACVSPAADSVNETVAALHYANRARNIKNK 262
RKREGIQINQGLLALGNVVNALGD+R +KK+ HVPYRQSKLTRLLQDALGGNSQTLFIACVSPAADS+NETVAALHYANRARNIKN+
Sbjct: 303 RKREGIQINQGLLALGNVVNALGDDRSDKKTTHVPYRQSKLTRLLQDALGGNSQTLFIACVSPAADSLNETVAALHYANRARNIKNR 389
BLAST of mRNA_S-dermatodea_contig8286.16474.1 vs. uniprot
Match: D8LDY4_ECTSI (Kinesin motor domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDY4_ECTSI) HSP 1 Score: 160 bits (404), Expect = 1.050e-43 Identity = 80/87 (91.95%), Postives = 85/87 (97.70%), Query Frame = 2
Query: 2 RKREGIQINQGLLALGNVVNALGDERLEKKSVHVPYRQSKLTRLLQDALGGNSQTLFIACVSPAADSVNETVAALHYANRARNIKNK 262
RKREGIQINQGLLALGNVVNALGD+R +KK+ HVPYRQSKLTRLLQDALGGNSQTLFIACVSPAADS+NETVAALHYANRARNIKN+
Sbjct: 269 RKREGIQINQGLLALGNVVNALGDDRSDKKTTHVPYRQSKLTRLLQDALGGNSQTLFIACVSPAADSLNETVAALHYANRARNIKNR 355
BLAST of mRNA_S-dermatodea_contig8286.16474.1 vs. uniprot
Match: B8BQ46_THAPS (Kinesin-like protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BQ46_THAPS) HSP 1 Score: 129 bits (323), Expect = 2.460e-34 Identity = 67/88 (76.14%), Postives = 78/88 (88.64%), Query Frame = 2
Query: 2 RKREGIQINQGLLALGNVVNALGDE-RLEK-KSVHVPYRQSKLTRLLQDALGGNSQTLFIACVSPAADSVNETVAALHYANRARNIKN 259
R REGI+IN+GLLALGNV+NALGDE RL K + VHVPYRQSKLTRLLQDALGGNSQTLF+ACVSP+ + +ET++ L YANRARNI+N
Sbjct: 254 RMREGIKINEGLLALGNVINALGDEERLAKGEKVHVPYRQSKLTRLLQDALGGNSQTLFLACVSPSDTNASETISTLQYANRARNIRN 341
BLAST of mRNA_S-dermatodea_contig8286.16474.1 vs. uniprot
Match: A0A4P9XHX3_9FUNG (P-loop containing nucleoside triphosphate hydrolase protein (Fragment) n=1 Tax=Thamnocephalis sphaerospora TaxID=78915 RepID=A0A4P9XHX3_9FUNG) HSP 1 Score: 122 bits (306), Expect = 5.800e-34 Identity = 64/87 (73.56%), Postives = 72/87 (82.76%), Query Frame = 2
Query: 2 RKREGIQINQGLLALGNVVNALGDERLEKKSVHVPYRQSKLTRLLQDALGGNSQTLFIACVSPAADSVNETVAALHYANRARNIKNK 262
R REGI IN GL ALGNV++ALGD KK+VHVPYR SKLTRLLQD+LGGNSQTL IACVSPAA ++ ET+ L YANRARNIKN+
Sbjct: 56 RAREGISINAGLSALGNVISALGDNT--KKAVHVPYRDSKLTRLLQDSLGGNSQTLMIACVSPAASNLTETLNTLKYANRARNIKNQ 140
BLAST of mRNA_S-dermatodea_contig8286.16474.1 vs. uniprot
Match: A0A4D9D969_9STRA (Kinesin motor domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D969_9STRA) HSP 1 Score: 131 bits (330), Expect = 1.010e-33 Identity = 70/90 (77.78%), Postives = 81/90 (90.00%), Query Frame = 2
Query: 2 RKREGIQINQGLLALGNVVNALGDE-RLEK--KSVHVPYRQSKLTRLLQDALGGNSQTLFIACVSPAADSVNETVAALHYANRARNIKNK 262
R+REGIQIN GLLALG+V+NAL DE RL K K+VHVPYRQSKLTRLLQDALGGNSQTLF+ACVSPAA + +ET++ L+YANRARNI+NK
Sbjct: 293 RRREGIQINVGLLALGSVINALADEERLVKGKKAVHVPYRQSKLTRLLQDALGGNSQTLFLACVSPAAINASETLSTLYYANRARNIRNK 382
BLAST of mRNA_S-dermatodea_contig8286.16474.1 vs. uniprot
Match: A0A1E7F667_9STRA (Kinesin-like protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7F667_9STRA) HSP 1 Score: 125 bits (314), Expect = 5.900e-33 Identity = 62/87 (71.26%), Postives = 77/87 (88.51%), Query Frame = 2
Query: 2 RKREGIQINQGLLALGNVVNALGDER-LEKKSVHVPYRQSKLTRLLQDALGGNSQTLFIACVSPAADSVNETVAALHYANRARNIKN 259
R REGI+IN+GLLALGNV+NAL +++ +K VHVPYRQSKLTRLLQDALGGNSQTLF+ACVSP+ + +ET++ L+YANRARNI+N
Sbjct: 249 RAREGIKINEGLLALGNVINALAEDKPANEKKVHVPYRQSKLTRLLQDALGGNSQTLFLACVSPSDTNASETLSTLNYANRARNIRN 335
BLAST of mRNA_S-dermatodea_contig8286.16474.1 vs. uniprot
Match: A0A7S4J1K6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4J1K6_9STRA) HSP 1 Score: 129 bits (323), Expect = 8.830e-33 Identity = 68/88 (77.27%), Postives = 77/88 (87.50%), Query Frame = 2
Query: 2 RKREGIQINQGLLALGNVVNALGD-ERLEKKS-VHVPYRQSKLTRLLQDALGGNSQTLFIACVSPAADSVNETVAALHYANRARNIKN 259
R REGI+IN+GLLALGNV+NAL D ERL K VHVPYRQSKLTRLLQDALGGNSQTLF+ACVSP+ + +ET++ LHYANRARNIKN
Sbjct: 182 RAREGIKINEGLLALGNVINALADDERLAKGGRVHVPYRQSKLTRLLQDALGGNSQTLFLACVSPSDTNASETLSTLHYANRARNIKN 269
BLAST of mRNA_S-dermatodea_contig8286.16474.1 vs. uniprot
Match: A0A2N0PNV8_9GLOM (P-loop containing nucleoside triphosphate hydrolase protein (Fragment) n=1 Tax=Rhizophagus irregularis TaxID=588596 RepID=A0A2N0PNV8_9GLOM) HSP 1 Score: 122 bits (306), Expect = 1.020e-32 Identity = 61/86 (70.93%), Postives = 70/86 (81.40%), Query Frame = 2
Query: 2 RKREGIQINQGLLALGNVVNALGDERLEKKSVHVPYRQSKLTRLLQDALGGNSQTLFIACVSPAADSVNETVAALHYANRARNIKN 259
R +EGI IN GLLALGNV++ALGD K + H+PYR SKLTRLLQD+LGGN+QTL IACVSPA ++NETV L YANRARNIKN
Sbjct: 10 RAKEGISINSGLLALGNVISALGDPNKAKHTTHIPYRDSKLTRLLQDSLGGNAQTLMIACVSPAEFNLNETVNTLKYANRARNIKN 95
BLAST of mRNA_S-dermatodea_contig8286.16474.1 vs. uniprot
Match: A0A0V0H525_SOLCH (Putative ovule protein (Fragment) n=1 Tax=Solanum chacoense TaxID=4108 RepID=A0A0V0H525_SOLCH) HSP 1 Score: 121 bits (304), Expect = 1.040e-32 Identity = 59/87 (67.82%), Postives = 72/87 (82.76%), Query Frame = 2
Query: 2 RKREGIQINQGLLALGNVVNALGDERLEKKSVHVPYRQSKLTRLLQDALGGNSQTLFIACVSPAADSVNETVAALHYANRARNIKNK 262
R REGI IN+GLLALGNV++ALGD++ K+ H+PYR SKLTRLLQD+LGGNS+T+ IACVSPA + ET+ L YANRARNI+NK
Sbjct: 61 RLREGIHINKGLLALGNVISALGDDKKRKEGAHIPYRDSKLTRLLQDSLGGNSKTVMIACVSPADTNAEETLNTLKYANRARNIQNK 147
BLAST of mRNA_S-dermatodea_contig8286.16474.1 vs. uniprot
Match: B8BW53_THAPS (Kinesin-like protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BW53_THAPS) HSP 1 Score: 124 bits (312), Expect = 1.120e-32 Identity = 65/88 (73.86%), Postives = 77/88 (87.50%), Query Frame = 2
Query: 2 RKREGIQINQGLLALGNVVNALGDE-RLEK-KSVHVPYRQSKLTRLLQDALGGNSQTLFIACVSPAADSVNETVAALHYANRARNIKN 259
R +EGI+IN+GLLALGNV+NAL DE RL + + VHVPYRQSKLTRLLQDALGGNSQTLF+ACVSP+ + +ET++ L YANRARNIKN
Sbjct: 225 RAKEGIKINEGLLALGNVINALADEERLARGEKVHVPYRQSKLTRLLQDALGGNSQTLFLACVSPSDTNASETLSTLQYANRARNIKN 312 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig8286.16474.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig8286.16474.1 >prot_S-dermatodea_contig8286.16474.1 ID=prot_S-dermatodea_contig8286.16474.1|Name=mRNA_S-dermatodea_contig8286.16474.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=88bp EEAGGHPDQSGSACAGQRGECFGRRATGEEERARPVPTVQAHQAASGRSRback to top mRNA from alignment at S-dermatodea_contig8286:522..4918- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig8286.16474.1 ID=mRNA_S-dermatodea_contig8286.16474.1|Name=mRNA_S-dermatodea_contig8286.16474.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=4397bp|location=Sequence derived from alignment at S-dermatodea_contig8286:522..4918- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig8286:522..4918- >mRNA_S-dermatodea_contig8286.16474.1 ID=mRNA_S-dermatodea_contig8286.16474.1|Name=mRNA_S-dermatodea_contig8286.16474.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=528bp|location=Sequence derived from alignment at S-dermatodea_contig8286:522..4918- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |