mRNA_S-dermatodea_contig8276.16469.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig8276.16469.1 vs. uniprot
Match: D8LE86_ECTSI (Similar to Transmembrane protein 15 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE86_ECTSI) HSP 1 Score: 523 bits (1346), Expect = 5.720e-175 Identity = 292/479 (60.96%), Postives = 340/479 (70.98%), Query Frame = 1
Query: 1 RLVVLVAGCTQHCRQPLLPLWCVAVYDVIRRTLDRGNGREMRRLSLRPGEVAILAHALALWAVDACLYTVQELWVPESRAL--EGLFPQVPRRSGSMIMVQTGIIGTLLTGLSVACVRALGPKAWSNDA---RGHAVTYGLLATGTAAWLSRWTAPLLG-SNPVSWAVLYALGVSPERAERSAHGHAIQALVVNFLRRVSSGLITAAEALC---------GAVEAGIEVNRPLLVAGWVVALGVVVPLTPWASRRLSLS--RNASRKAFHALATAMFVPAIALERDFLSLALGAALGLLLTLEVLRCAGCPPVARVLDRYYGGFLDARDGGCVVVTHLFLLLGCAVPVWLSGLAGSRAG--------VLPYGGVIVVGIGDAMGALVGSNIGRLHWPGGSRRTLEGSASVFLSSLAALTFASRVLVD--GAAGAGEEGWTQAAARLAWPAAIASLMEAFTTQVDNLVLPCLLFSCLALG 1356
RL + AGC C +PLLPLWCVAVYDV RR LD GR+MRRLSLR GE A+L HAL+LW VDACLYTVQELW S A E +FP+VP RS SM++VQTGI+GTL+TGL++A RAL P W + + A+TY +LA GTAAWL+ WTAPLLG SNPV+W L+++G S + G IQ+ + G AA G + G+ NRPLLVAGWV+AL VVVP PW SRRL LS + SRK FH LATAMFVPAIALE DFLSLALG ALG+LL LE LRC GCPP+A +D YYGGFLDARDGGCVVVTHLFLL+GCAVPVWLSGL GS G + PY GV+V+GIGDAMGA+VGS++GRLHWPG SRRTLEGSASVFLS+L +L VL+ G +G EGW +AA LAWP A+ SLMEAFTTQVDNLVLPC+L +CLA+G
Sbjct: 433 RLAAIAAGCLMCCGRPLLPLWCVAVYDVFRRALDLHKGRQMRRLSLRAGEAAVLTHALSLWVVDACLYTVQELWAVGSSASTWERMFPRVPSRSESMVVVQTGILGTLVTGLALASARALTPAGWRSSRPPWQSCALTYTVLAGGTAAWLTYWTAPLLGYSNPVAWVALHSVGYSDPAETATRAGLCIQSWTDKHVTEGWRGGAVAAGVFRWAWSEMRGEGGIGEGMGGNRPLLVAGWVLALAVVVPSVPWLSRRLPLSGRKTTSRKLFHFLATAMFVPAIALEPDFLSLALGTALGVLLALEFLRCTGCPPLASAMDGYYGGFLDARDGGCVVVTHLFLLVGCAVPVWLSGLMGSHDGDGQGGILQLFPYAGVVVLGIGDAMGAMVGSSVGRLHWPG-SRRTLEGSASVFLSTLGSLLLLWFVLLGLRGEEDSGGEGWRKAARSLAWPVAVTSLMEAFTTQVDNLVLPCVLLACLAVG 910
BLAST of mRNA_S-dermatodea_contig8276.16469.1 vs. uniprot
Match: A0A6H5L8T3_9PHAE (Dolichol kinase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8T3_9PHAE) HSP 1 Score: 520 bits (1338), Expect = 2.820e-172 Identity = 292/479 (60.96%), Postives = 337/479 (70.35%), Query Frame = 1
Query: 1 RLVVLVAGCTQHCRQPLLPLWCVAVYDVIRRTLDRGNGREMRRLSLRPGEVAILAHALALWAVDACLYTVQELWVPESRAL--EGLFPQVPRRSGSMIMVQTGIIGTLLTGLSVACVRALGPKAWSNDA---RGHAVTYGLLATGTAAWLSRWTAPLLG-SNPVSWAVLYALGVSPERAERSAHGHAIQALVVNFLRRVSSGLITAAEALC---------GAVEAGIEVNRPLLVAGWVVALGVVVPLTPWASRRLSLS--RNASRKAFHALATAMFVPAIALERDFLSLALGAALGLLLTLEVLRCAGCPPVARVLDRYYGGFLDARDGGCVVVTHLFLLLGCAVPVWLSGLAGSRAG--------VLPYGGVIVVGIGDAMGALVGSNIGRLHWPGGSRRTLEGSASVFLSSLAALTFASRVLVD--GAAGAGEEGWTQAAARLAWPAAIASLMEAFTTQVDNLVLPCLLFSCLALG 1356
RL + AGC CR+PLLPLWCV VYDV RR LD GR+MRRLSLR GE A+L HAL+LW VDACLYTVQELWV S A E +FP+VP RS +MI+VQTGI+GTL TGL++A RAL P AW + + A TY +LA GTA+WL+ WTAPLLG SNP +W LY++G S + G IQ+ G AA G + G+ NRPLLVAGWV+AL VVVP PW SRRL LS + SRK FH LATAMFVPAIALE DFLSLALG ALG+LL LE LRC GCPPVA V+D YY GFLDARDGGCVVVTHLFLL+GCAVPVWLSGL GS G + PY GV+V+GIGDAMGA+VGS++GRLHWPG SRRTLEGSASVFLS+L L VL+ G +G EGW +AA LAWP A+ SLMEAFTTQVDN+VLPC+L +CL++G
Sbjct: 560 RLAAIAAGCLMCCRRPLLPLWCVVVYDVFRRALDLHRGRQMRRLSLRAGEAAVLTHALSLWVVDACLYTVQELWVVGSSASTWERMFPRVPPRSETMIVVQTGILGTLATGLALASARALAPAAWRSSRPPWQSCAFTYTVLAGGTASWLTYWTAPLLGYSNPAAWVALYSMGYSDPAETAARAGLFIQSWADKHATEGWRGGAVAAGVFRWAWSEMKGEGGIGEGMGGNRPLLVAGWVLALAVVVPSVPWLSRRLPLSGRKTTSRKLFHFLATAMFVPAIALEPDFLSLALGTALGVLLALEFLRCTGCPPVASVMDGYYEGFLDARDGGCVVVTHLFLLVGCAVPVWLSGLMGSHDGDGQGSVLQLFPYSGVVVLGIGDAMGAIVGSSVGRLHWPG-SRRTLEGSASVFLSTLGTLLLVWFVLLGLRGGEESGGEGWRRAAEILAWPVALTSLMEAFTTQVDNIVLPCVLLACLSVG 1037
BLAST of mRNA_S-dermatodea_contig8276.16469.1 vs. uniprot
Match: A0A067CGI3_SAPPC (Dolichol kinase n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CGI3_SAPPC) HSP 1 Score: 151 bits (381), Expect = 1.080e-36 Identity = 95/230 (41.30%), Postives = 132/230 (57.39%), Query Frame = 1
Query: 655 LVAGWVVALGVVVPLTPWASRRLSLSRNASRKAFHALATAMFVPAIALERDFLSLALGAALGLLLTLEVLRCAGCPPVARVLDRYYGGFLDARDGGCVVVTHLFLLLGCAVPVWLSGLAGSRAGVLPYGGVIVVGIGDAMGALVGSNIGRLHWPGGSRRTLEGSASVFLSSLAALTFASRVLVDGAAGAGEEGW-TQAAARLAWPAAIASLMEAFTTQVDNLVLPCLLFS 1341
++A W + LGVVVPL PW + L L + +RK +H LA A+F+PA L+ D L L+ A+GL LE +R PP+ R + + +LD RD G +V++H +LLLGCA+P WL A + +L GV+ +GIGDAMGA+VGS++GR G +TLEGS +VF+S VL AA W T W + + +EA T Q+DNLVLP F+
Sbjct: 308 VLACWALLLGVVVPLCPWIASTLGLRQIVARKLYHFLAVALFLPASLLDMDLLRLSYAIAIGLFFILECVRALSVPPMGRPIAAFMRAYLDHRDDGRIVLSHTYLLLGCALPSWLCPTASTV--LLANTGVLALGIGDAMGAVVGSSVGRTKVCG--TKTLEGSVAVFISM---------VLFAYAAVPSAHPWATPVFLGFLWSTWLTTALEAVTCQIDNLVLPLFYFA 524
BLAST of mRNA_S-dermatodea_contig8276.16469.1 vs. uniprot
Match: A0A2R5GEA6_9STRA (Dolichol kinase n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GEA6_9STRA) HSP 1 Score: 146 bits (368), Expect = 1.230e-34 Identity = 90/236 (38.14%), Postives = 132/236 (55.93%), Query Frame = 1
Query: 667 WVVALGVVVPLTPWASRRLSLSRNASRKAFHALATAMFVPAIALERDFLSLALGAALGLLLTLEVLRCAGCPPVARVLDRYYGGFLDARDGGCVVVTHLFLLLGCAVPVWL-SGLAGSRAGVLPYGGVIVVGIGDAMGALVGSNIGRLHWPGGSRRTLEGSASVFLSSLAALTFASRVLVDGAAGAGEEGWTQAAAR-LAWPAAIAS-----LMEAFTTQVDNLVLPCLLFSCLAL 1353
W+ LG+ +P+ + R +RK +H LA A+F P + FL+L+ G A+ LLL +EV+R PP + + + D+RD G ++TH++LLLGCA+P+WL + +AG + G+ ++G GDA GA++GS +GR HWPGG R+T EG+ + LS+LA L R L W AA + WP + L+EAFT Q+DNL LP L + LAL
Sbjct: 360 WIAVLGLGLPVIHLIASRAGWPLIITRKLYHILALAIFAPPMVAVPAFLALSFGIAVALLLFIEVVRICRIPPFGAWIHAFLRNYTDSRDEGTTILTHIYLLLGCAIPLWLFTDIAGPSTSEARFAGLAILGAGDAAGAIIGSQLGRRHWPGG-RKTFEGTLAAVLSTLAVL----RALH----------WAHAADKPFNWPVVFVATTLTCLIEAFTKQIDNLTLPVLYAALLAL 580
BLAST of mRNA_S-dermatodea_contig8276.16469.1 vs. uniprot
Match: A0A4D9CPJ6_9STRA (Dolichol kinase n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CPJ6_9STRA) HSP 1 Score: 146 bits (369), Expect = 2.480e-34 Identity = 105/228 (46.05%), Postives = 134/228 (58.77%), Query Frame = 1
Query: 649 PLLVAGWVVALGVVVPLTPWASRRLSLSRNASRKAFHALATAMFVPAIALERDFLSLALGAALGLLLTLEVLRCAGCPPV-ARVLDRYYGGFLDARDGGCVVVTHLFLLLGCAVPVWLSGLAG-SRAGVLPYGGVIVVGIGDAMGALVGSNIGRLHWPGGSRRTLEGSASVFLSSLAALTFASRVLVDGAAGAGEEGWTQAAARLAWPAAIASLMEAFTTQVDNLVLP 1326
PLLV + L + P SR SL R +RKAFHALAT++F + FLSLA AL LLL LE LR + R + RYY FLD RD G +VVTHL+LLL CA P+WLS L +R LP G++VVG+GDA A VG+ G+ WPG +RRTLEGSA+ F+++ L +++ +G G GW A L +L+EAFT Q+DNLVLP
Sbjct: 522 PLLVLWSLTLLAFTSAIVP-VSRAFSLPRILTRKAFHALATSLFALPALRQPLFLSLAHALALALLLLLEYLRLGRASLLLGRPVHRYYQHFLDDRDMGPLVVTHLYLLLACAFPLWLSFLLPPNRPPSLPLAGILVVGMGDAAAATVGTLCGKHRWPG-TRRTLEGSAAFFIAT--GLGVFTQLGQEGGKEGGVWGWGGAVVLL-------TLLEAFTAQIDNLVLP 738
BLAST of mRNA_S-dermatodea_contig8276.16469.1 vs. uniprot
Match: A0A6G0XPU4_9STRA (Dolichol kinase n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XPU4_9STRA) HSP 1 Score: 144 bits (362), Expect = 4.900e-34 Identity = 140/446 (31.39%), Postives = 213/446 (47.76%), Query Frame = 1
Query: 49 LLPLWCVAVYDVIRRTLDRGN-----GREMRRLSLRPGEVAILAHALALWAVDACLYTVQELWVPESRALEGLFPQVPRRSGSMIMVQTGIIGTL-LTGLSVACVRALGPKAWSNDARGHAVTYGLLATGTAAWLSRWTAPLLGSNPVSWAVLYALGVSPERAERSAHGHAIQALVVNFLRRVSSGLITAAEALCGAVEAGIEVNRPLLVAG-WVVALGVVVPLTPWASRRLSLSRNASRKAFHALATAMFVPAIALERDFLSLALGAALGLLLTLEVLRCAGCPPVARVLDRYYGGFLDARDGGCVVVTHLFLLLGCAVPVW-LSGLAGSRAG--VLPYGGVIVVGIGDAMGALVGSNIGRLHWPGGSRRTLEGSASVFLSSLAALTFASRVLVDGAAGAGEEGWTQA--AARLAWPAA--IASLMEAFTTQVDNLVLPCLLFSC 1344
LLP+ V Y I T+ N G S GE +++ +A A+DA L+++++ + +P R G I++Q G++ L + L + R G T T + R T P P A+ L + + +NF+ S I E L V + V+ L+VAG W+V L VVVP+ P +++L L + SRK +H LA MF+P + D L L+ G A+G+ + +E +R PP R + + +LD RD G VV++H +LLLGCA+P W LSGL S ++ GV+ +GIGDAMGA VGS +G+ G +++LEGS ++F AS V+V A + + Q A+ +A+ +A + + +EA T Q+DNLVLP LF C
Sbjct: 149 LLPIDQVTSYVHIHATIAAYNITLHFGFPFLSHSFTFGEGMLISQGVAFLAIDALLFSLKQFGMS--------LADIPSRDGFSIVLQLGLLSALVMPALCIPLFRVYG-------------------TSTPR-IIRPTLP-----PSQTAIFLGL---------------LALVALNFIVWAS---ILLNEPLWLWVLENLVVSSKLMVAGYWIVVLAVVVPVCPILAKQLGLKQIVSRKLYHVLAVLMFLPVSLYDVDMLRLSYGVAVGVFVVVECIRALAVPPFGRHIALFIRVYLDHRDEGRVVLSHTYLLLGCALPTWILSGLPASSTSFVLIANAGVLALGIGDAMGAAVGSTMGKTKIVG--KKSLEGSIAMF---------ASMVIVSFACHSYHWDFVQGKYASAIAFASATLLTAALEAITMQIDNLVLP--LFYC 530
BLAST of mRNA_S-dermatodea_contig8276.16469.1 vs. uniprot
Match: R1D3F0_EMIHU (Dolichol kinase n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1D3F0_EMIHU) HSP 1 Score: 145 bits (365), Expect = 5.210e-34 Identity = 92/207 (44.44%), Postives = 117/207 (56.52%), Query Frame = 1
Query: 742 SRKAFHALATAMFVPAIALERDFLSLALGAALGLLLTLEVLRCAGCPPVARVLDRYYGGFLDARDGGCVVVTHLFLLLGCAVPVWLSG------------LAGSRAGVLPYGGVIVVGIGDAMGALVGSNIGRLHWPGGSRRTLEGSASVFLSSLAALTFASRVLVDGAAGAGEEGWTQAAARLAWPAAIASLMEAFTTQVDNLVLP 1326
+RK FH LA A+F PAI L L+LAL A + LE++R PP+AR L + FLD+RD G +V+TH++LL GCA+PVWL LA + P GV+V+G+GDAM +LVG GR WP SR+TLEGSA+ S+L AL V A A W A LA A+A L+EA T Q+DNL LP
Sbjct: 430 ARKIFHLLAVALFCPAIVLAPSLLALALAAVVPAFALLELVRVGALPPLARPLAAFLAAFLDSRDAGTLVLTHIYLLAGCALPVWLQSALPPPPPASRAPLAAAAVRGAPLAGVLVLGVGDAMASLVGVRFGRTRWPR-SRKTLEGSAAAAGSTLLALLLLLHVSSPDGAPADARTW----AALAGGTAVACLLEAATDQIDNLFLP 631
BLAST of mRNA_S-dermatodea_contig8276.16469.1 vs. uniprot
Match: A0A8J2FDY7_9DINO (Dolichol kinase n=1 Tax=Amoebophrya sp. A25 TaxID=1410381 RepID=A0A8J2FDY7_9DINO) HSP 1 Score: 145 bits (366), Expect = 8.810e-34 Identity = 82/209 (39.23%), Postives = 123/209 (58.85%), Query Frame = 1
Query: 715 RRLSLSRNASRKAFHALATAMFVPAIALERDFLSLALGAALGLLLTLEVLRCAGCPPVARVLDRYYGGFLDARDGGCVVVTHLFLLLGCAVPVWLS-----GLAGSRAGVLPYGGVIVVGIGDAMGALVGSNIGRLHWPGGSRRTLEGSASVFLSSLAALTFASRVLVDGAAGAGEEGWTQAAARLAWPAAIASLMEAFTTQVDNLVLP 1326
R++S R +RK FH LA MFVP+I + F SLA A +LL +E R AG PPVA + + ++D RD G V++TH++LLLGCAVPVW + G+ +R+ ++ G+ G+GD+ ++VG++ G+ WPGG ++T+EGS F+S+ A +L G E W RLA + +++EA T Q+DNL+LP
Sbjct: 806 RKISARRIVTRKYFHFLAIVMFVPSILVHIRFSSLAFAVAFAVLLLIEAFRSAGVPPVAHYVTEFISPYIDTRDAGTVILTHMYLLLGCAVPVWYAFFVHGGIFQARSLLIALSGLTCTGVGDSFASIVGTSCGKHRWPGGLKKTIEGSLGFFVSAFAFQAIMLYIL--GFHNLSTESWL----RLALADFLVAILEACTDQIDNLILP 1008
BLAST of mRNA_S-dermatodea_contig8276.16469.1 vs. uniprot
Match: W7TAW7_9STRA (Dolichol kinase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TAW7_9STRA) HSP 1 Score: 142 bits (359), Expect = 1.440e-33 Identity = 105/230 (45.65%), Postives = 135/230 (58.70%), Query Frame = 1
Query: 655 LVAGWVVAL----GVVVPLTPWASRRLSLSRNASRKAFHALATAMFVPAIALERDFLSLALGAALGLLLTLEVLRCAGCPPV-ARVLDRYYGGFLDARDGGCVVVTHLFLLLGCAVPVWLSGLAG-SRAGVLPYGGVIVVGIGDAMGALVGSNIGRLHWPGGSRRTLEGSASVFLSSLAALTFASRVLVDGAAGAGEEGWTQAAARLAWPAAIASLMEAFTTQVDNLVLP 1326
L+A W + L +VPL SR SL R +RKAFHALAT++F + FLSLA AL LLL LE LR + R + RYY FLD RD G +VVTHL+LLL CA P+WLS L +R LP G++VVG+GDA A VG+ G+ WP +RRTLEGSA+ F+++ L +++ +G G GW A L +L+EAFT Q+DNLVLP
Sbjct: 320 LLALWSLTLLAFTSAIVPL----SRAFSLPRILTRKAFHALATSLFALPALHQPLFLSLAHALALSLLLLLEYLRLGRASLLLGRPVHRYYQHFLDDRDMGPLVVTHLYLLLACAFPLWLSFLLPPNRPPSLPLAGILVVGMGDAAAATVGTLCGKHRWPW-TRRTLEGSAAFFIAT--GLGVFTQLGQEGGKERGVWGWVGAVVLL-------TLLEAFTAQIDNLVLP 535
BLAST of mRNA_S-dermatodea_contig8276.16469.1 vs. uniprot
Match: A0A1W0A6T5_9STRA (Dolichol kinase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A6T5_9STRA) HSP 1 Score: 142 bits (358), Expect = 1.570e-33 Identity = 95/233 (40.77%), Postives = 136/233 (58.37%), Query Frame = 1
Query: 667 WVVALGVVVPLTPWASRRLSLSRNASRKAFHALATAMFVPAIALERDFLSLALGAALGLLLTLEVLRCAGCPPVARVLDRYYGGFLDARDGGCVVVTHLFLLLGCAVPVWLSGLAGSRAGVLPYGGVIVVGIGDAMGALVGSNIGRLHWPGGSRRTLEGSASVFLSSLAALTFASRVLVDGAAGAGEEGWTQAAARLAWPAAIA--------SLMEAFTTQVDNLVLPCLLFS 1341
W+ LGV VPL P S+ L+L + SRK +H LA AMF+PA + D L L+ A+G+ + +E +R PP + ++ +LD RD G V++TH +LLLGCA+PVWLS GS V GV+ +GIGDAMGA+VGS+ GR G ++LEGSA+VF+S + F + + E G + ++++ PA IA + +EA T Q+DNLVLP F+
Sbjct: 301 WLFMLGVAVPLCPIISKLLTLRQIVSRKLYHFLAVAMFLPASYWDIDLLRLSYAIAVGVFMIVECVRALAVPPFGLPISKFVSAYLDRRDEGRVILTHTYLLLGCALPVWLSPNFGSLLTV--NAGVLALGIGDAMGAIVGSSYGRHKVCG--NKSLEGSAAVFVSMV---LFGLKSVQS----YHELGMNENSSQIISPAVIAFFGSAWLTTTLEAVTCQIDNLVLPLFYFT 522 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig8276.16469.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig8276.16469.1 >prot_S-dermatodea_contig8276.16469.1 ID=prot_S-dermatodea_contig8276.16469.1|Name=mRNA_S-dermatodea_contig8276.16469.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=452bp RLVVLVAGCTQHCRQPLLPLWCVAVYDVIRRTLDRGNGREMRRLSLRPGEback to top mRNA from alignment at S-dermatodea_contig8276:3199..8683- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig8276.16469.1 ID=mRNA_S-dermatodea_contig8276.16469.1|Name=mRNA_S-dermatodea_contig8276.16469.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=5485bp|location=Sequence derived from alignment at S-dermatodea_contig8276:3199..8683- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig8276:3199..8683- >mRNA_S-dermatodea_contig8276.16469.1 ID=mRNA_S-dermatodea_contig8276.16469.1|Name=mRNA_S-dermatodea_contig8276.16469.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=2712bp|location=Sequence derived from alignment at S-dermatodea_contig8276:3199..8683- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |