prot_S-dermatodea_contig82751.16468.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig82751.16468.1
Unique Nameprot_S-dermatodea_contig82751.16468.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length56
Homology
BLAST of mRNA_S-dermatodea_contig82751.16468.1 vs. uniprot
Match: W7TL91_9STRA (Ribosome biogenesis protein bop1 (Fragment) n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TL91_9STRA)

HSP 1 Score: 105 bits (263), Expect = 5.070e-27
Identity = 45/55 (81.82%), Postives = 53/55 (96.36%), Query Frame = 0
Query:    2 QVLVKKLLSGCRWISSMDVHPSGDHLIVGSYDRRVVWFDLDLSSTPYKTLKYHNK 56
            QVL+KKLLSGC+WISS+D+HP+GDH++V SYDRRVVWFDLDLSS PYKTLKYH+K
Sbjct:   88 QVLMKKLLSGCKWISSLDIHPTGDHVLVSSYDRRVVWFDLDLSSLPYKTLKYHSK 142          
BLAST of mRNA_S-dermatodea_contig82751.16468.1 vs. uniprot
Match: D7G698_ECTSI (Ribosome biogenesis protein BOP1 homolog n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G698_ECTSI)

HSP 1 Score: 107 bits (268), Expect = 6.000e-26
Identity = 47/55 (85.45%), Postives = 52/55 (94.55%), Query Frame = 0
Query:    2 QVLVKKLLSGCRWISSMDVHPSGDHLIVGSYDRRVVWFDLDLSSTPYKTLKYHNK 56
            Q+LVKKL+SGC+WIS +DVHPSGDHLIVGSYDRRV WFDLDL+STPYKTLKYH K
Sbjct:  504 QMLVKKLISGCKWISCIDVHPSGDHLIVGSYDRRVAWFDLDLASTPYKTLKYHTK 558          
BLAST of mRNA_S-dermatodea_contig82751.16468.1 vs. uniprot
Match: A0A7S3HLF9_9STRA (Ribosome biogenesis protein BOP1 homolog n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HLF9_9STRA)

HSP 1 Score: 107 bits (267), Expect = 8.550e-26
Identity = 47/55 (85.45%), Postives = 53/55 (96.36%), Query Frame = 0
Query:    2 QVLVKKLLSGCRWISSMDVHPSGDHLIVGSYDRRVVWFDLDLSSTPYKTLKYHNK 56
            Q LVKKL+SGC+W+SS+DVHPSGDH+IVGSYDRRVVWFDLDLSSTPYKTLK+H K
Sbjct:  719 QKLVKKLVSGCKWLSSIDVHPSGDHVIVGSYDRRVVWFDLDLSSTPYKTLKFHEK 773          
BLAST of mRNA_S-dermatodea_contig82751.16468.1 vs. uniprot
Match: A0A6H5JI55_9PHAE (Ribosome biogenesis protein BOP1 homolog n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI55_9PHAE)

HSP 1 Score: 106 bits (265), Expect = 1.590e-25
Identity = 46/55 (83.64%), Postives = 52/55 (94.55%), Query Frame = 0
Query:    2 QVLVKKLLSGCRWISSMDVHPSGDHLIVGSYDRRVVWFDLDLSSTPYKTLKYHNK 56
            Q+LVKKL+SGC+WIS +DVHP+GDHLIVGSYDRRV WFDLDL+STPYKTLKYH K
Sbjct:  744 QMLVKKLISGCKWISCIDVHPTGDHLIVGSYDRRVAWFDLDLASTPYKTLKYHTK 798          
BLAST of mRNA_S-dermatodea_contig82751.16468.1 vs. uniprot
Match: K8YSG6_NANGC (Block of proliferation 1 n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YSG6_NANGC)

HSP 1 Score: 105 bits (263), Expect = 2.970e-25
Identity = 45/55 (81.82%), Postives = 53/55 (96.36%), Query Frame = 0
Query:    2 QVLVKKLLSGCRWISSMDVHPSGDHLIVGSYDRRVVWFDLDLSSTPYKTLKYHNK 56
            QVL+KKLLSGC+WISS+D+HP+GDH++V SYDRRVVWFDLDLSS PYKTLKYH+K
Sbjct:  240 QVLMKKLLSGCKWISSLDIHPTGDHVLVSSYDRRVVWFDLDLSSLPYKTLKYHSK 294          
BLAST of mRNA_S-dermatodea_contig82751.16468.1 vs. uniprot
Match: A0A7S2KDQ6_9STRA (Ribosome biogenesis protein BOP1 homolog n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KDQ6_9STRA)

HSP 1 Score: 105 bits (261), Expect = 5.530e-25
Identity = 45/55 (81.82%), Postives = 51/55 (92.73%), Query Frame = 0
Query:    2 QVLVKKLLSGCRWISSMDVHPSGDHLIVGSYDRRVVWFDLDLSSTPYKTLKYHNK 56
            Q +VK+LLSGCRWISS+DVHPSGDH+I GS DRR++WFDLDLSSTPYKTLKYH K
Sbjct:  712 QTMVKRLLSGCRWISSLDVHPSGDHVIAGSLDRRMIWFDLDLSSTPYKTLKYHEK 766          
BLAST of mRNA_S-dermatodea_contig82751.16468.1 vs. uniprot
Match: A0A7S3YFA3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YFA3_HETAK)

HSP 1 Score: 100 bits (249), Expect = 5.930e-25
Identity = 43/53 (81.13%), Postives = 50/53 (94.34%), Query Frame = 0
Query:    2 QVLVKKLLSGCRWISSMDVHPSGDHLIVGSYDRRVVWFDLDLSSTPYKTLKYH 54
            Q LVKK+L+GC+WIS+MDVHP+GDH++VGSYDRRVVW DLDLSS PYKTLKYH
Sbjct:   86 QALVKKVLTGCKWISAMDVHPTGDHVLVGSYDRRVVWCDLDLSSKPYKTLKYH 138          
BLAST of mRNA_S-dermatodea_contig82751.16468.1 vs. uniprot
Match: A0A4D9CM67_9STRA (Ribosome biogenesis protein BOP1 homolog n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CM67_9STRA)

HSP 1 Score: 104 bits (260), Expect = 7.550e-25
Identity = 44/55 (80.00%), Postives = 53/55 (96.36%), Query Frame = 0
Query:    2 QVLVKKLLSGCRWISSMDVHPSGDHLIVGSYDRRVVWFDLDLSSTPYKTLKYHNK 56
            QVL+KKLLSGC+WISS+D+HP+GDH++V SYDRRVVWFDLDLSS PY+TLKYH+K
Sbjct:  767 QVLMKKLLSGCKWISSLDIHPTGDHVLVSSYDRRVVWFDLDLSSLPYRTLKYHSK 821          
BLAST of mRNA_S-dermatodea_contig82751.16468.1 vs. uniprot
Match: A0A7S2ES45_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2ES45_TRICV)

HSP 1 Score: 99.8 bits (247), Expect = 1.560e-24
Identity = 40/55 (72.73%), Postives = 50/55 (90.91%), Query Frame = 0
Query:    2 QVLVKKLLSGCRWISSMDVHPSGDHLIVGSYDRRVVWFDLDLSSTPYKTLKYHNK 56
            Q +VK+L++GCRW+SS+DVHP+GDH++VGS DRR VWFDLDL STPYKTLKYH +
Sbjct:   99 QTMVKRLMTGCRWVSSLDVHPTGDHVLVGSLDRRAVWFDLDLGSTPYKTLKYHER 153          
BLAST of mRNA_S-dermatodea_contig82751.16468.1 vs. uniprot
Match: A0A024FYU0_9STRA (Ribosome biogenesis protein BOP1 homolog n=2 Tax=Albugo candida TaxID=65357 RepID=A0A024FYU0_9STRA)

HSP 1 Score: 103 bits (257), Expect = 1.920e-24
Identity = 46/55 (83.64%), Postives = 50/55 (90.91%), Query Frame = 0
Query:    2 QVLVKKLLSGCRWISSMDVHPSGDHLIVGSYDRRVVWFDLDLSSTPYKTLKYHNK 56
            Q LVKKL SG +WISSMDVHPSGDH+I+GSYDRR+ WFDLDLSSTPYKTLKYH K
Sbjct:  672 QTLVKKLSSGVKWISSMDVHPSGDHVIIGSYDRRLCWFDLDLSSTPYKTLKYHEK 726          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig82751.16468.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
W7TL91_9STRA5.070e-2781.82Ribosome biogenesis protein bop1 (Fragment) n=1 Ta... [more]
D7G698_ECTSI6.000e-2685.45Ribosome biogenesis protein BOP1 homolog n=1 Tax=E... [more]
A0A7S3HLF9_9STRA8.550e-2685.45Ribosome biogenesis protein BOP1 homolog n=1 Tax=S... [more]
A0A6H5JI55_9PHAE1.590e-2583.64Ribosome biogenesis protein BOP1 homolog n=1 Tax=E... [more]
K8YSG6_NANGC2.970e-2581.82Block of proliferation 1 n=1 Tax=Nannochloropsis g... [more]
A0A7S2KDQ6_9STRA5.530e-2581.82Ribosome biogenesis protein BOP1 homolog n=1 Tax=L... [more]
A0A7S3YFA3_HETAK5.930e-2581.13Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A4D9CM67_9STRA7.550e-2580.00Ribosome biogenesis protein BOP1 homolog n=1 Tax=N... [more]
A0A7S2ES45_TRICV1.560e-2472.73Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A024FYU0_9STRA1.920e-2483.64Ribosome biogenesis protein BOP1 homolog n=2 Tax=A... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 1..56
e-value: 6.9E-26
score: 93.0
IPR028598WD repeat BOP1/Erb1PANTHERPTHR17605RIBOSOME BIOGENESIS PROTEIN BOP1 BLOCK OF PROLIFERATION 1 PROTEINcoord: 2..56
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 5..54

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig82751contigS-dermatodea_contig82751:127..294 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig82751.16468.1mRNA_S-dermatodea_contig82751.16468.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig82751 127..294 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig82751.16468.1 ID=prot_S-dermatodea_contig82751.16468.1|Name=mRNA_S-dermatodea_contig82751.16468.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=56bp
MQVLVKKLLSGCRWISSMDVHPSGDHLIVGSYDRRVVWFDLDLSSTPYKT
LKYHNK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR028598BOP1/Erb1
IPR036322WD40_repeat_dom_sf