prot_S-dermatodea_contig8263.16462.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig8263.16462.1
Unique Nameprot_S-dermatodea_contig8263.16462.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length112
Homology
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BLAST of mRNA_S-dermatodea_contig8263.16462.1 vs. uniprot
Match: D8LIE1_ECTSI (Rhodanese Homology Domain superfamily n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIE1_ECTSI)

HSP 1 Score: 136 bits (342), Expect = 6.480e-35
Identity = 69/106 (65.09%), Postives = 82/106 (77.36%), Query Frame = 0 
Query:    6 GLFDVILLGGGSVADATELVAGGDGGETDGVERTPGDRLDIFLDRRLIKRSGLVLCDPSALVGGKAAARLLVARATEIKGTVEHARVPCAGPNGGLHVFKWKTYSH 111
            GLFDVILLGGG   +    V   +       +RTP +RLD+ +DRRL+KR+GLVLCDP AL GG+AAAR +VARA E+KG+VEHARVP AGP+GGLHVFKWKTYSH
Sbjct:  775 GLFDVILLGGGDGVEGAGSVPVRE------EDRTPSERLDLVMDRRLMKRTGLVLCDPQALGGGRAAARSMVARAAEVKGSVEHARVPGAGPSGGLHVFKWKTYSH 874
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BLAST of mRNA_S-dermatodea_contig8263.16462.1 vs. uniprot
Match: A0A6H5L4H6_9PHAE (Rhodanese domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4H6_9PHAE)

HSP 1 Score: 108 bits (269), Expect = 4.600e-25
Identity = 52/74 (70.27%), Postives = 60/74 (81.08%), Query Frame = 0 
Query:   38 RTPGDRLDIFLDRRLIKRSGLVLCDPSALVGGKAAARLLVARATEIKGTVEHARVPCAGPNGGLHVFKWKTYSH 111
            R P D    +   RL+KR+GLVLCDP AL GG+AAAR +VARA E+KG+VEHARVP AGP+GGLHVFKWKTYSH
Sbjct:  817 RQPKDWTLSWTGERLMKRTGLVLCDPQALGGGRAAARSMVARAAEVKGSVEHARVPGAGPSGGLHVFKWKTYSH 890
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig8263.16462.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LIE1_ECTSI6.480e-3565.09Rhodanese Homology Domain superfamily n=1 Tax=Ecto... [more]
A0A6H5L4H6_9PHAE4.600e-2570.27Rhodanese domain-containing protein n=1 Tax=Ectoca... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig8263contigS-dermatodea_contig8263:6334..7336 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig8263.16462.1mRNA_S-dermatodea_contig8263.16462.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig8263 5440..7759 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig8263.16462.1 ID=prot_S-dermatodea_contig8263.16462.1|Name=mRNA_S-dermatodea_contig8263.16462.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=112bp
MDGGAGLFDVILLGGGSVADATELVAGGDGGETDGVERTPGDRLDIFLDR
RLIKRSGLVLCDPSALVGGKAAARLLVARATEIKGTVEHARVPCAGPNGG
LHVFKWKTYSH*
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