prot_S-dermatodea_contig82604.16460.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig82604.16460.1
Unique Nameprot_S-dermatodea_contig82604.16460.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length92
Homology
BLAST of mRNA_S-dermatodea_contig82604.16460.1 vs. uniprot
Match: D8LMN8_ECTSI (WD repeat protein (Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMN8_ECTSI)

HSP 1 Score: 166 bits (421), Expect = 6.570e-46
Identity = 80/92 (86.96%), Postives = 84/92 (91.30%), Query Frame = 0
Query:    1 PPLPVPTGELVMGGRASRVMRGHNGDVVDLSWSPNAFLLSAGRDGSLRLWHPGRLGCVHLFAQTGAATPTSCAFHPRLENSFATAGEDGKVR 92
            P  P+  GELV+GGRASRVMRGHNGDVVDLSWS NAFLLSAGRDGSLRLWHP RLGCVHLF QTGAATPTSC+F+PRLENSFAT GEDGKVR
Sbjct:  853 PVPPLRRGELVVGGRASRVMRGHNGDVVDLSWSLNAFLLSAGRDGSLRLWHPARLGCVHLFPQTGAATPTSCSFNPRLENSFATGGEDGKVR 944          
BLAST of mRNA_S-dermatodea_contig82604.16460.1 vs. uniprot
Match: A0A6H5KWS7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWS7_9PHAE)

HSP 1 Score: 166 bits (421), Expect = 6.610e-46
Identity = 80/92 (86.96%), Postives = 84/92 (91.30%), Query Frame = 0
Query:    1 PPLPVPTGELVMGGRASRVMRGHNGDVVDLSWSPNAFLLSAGRDGSLRLWHPGRLGCVHLFAQTGAATPTSCAFHPRLENSFATAGEDGKVR 92
            P  P+  GELV+GGRASRVMRGHNGDVVDLSWS NAFLLSAGRDGSLRLWHP RLGCVHLF QTGAATPTSC+F+PRLENSFAT GEDGKVR
Sbjct: 1140 PVPPLRRGELVIGGRASRVMRGHNGDVVDLSWSLNAFLLSAGRDGSLRLWHPARLGCVHLFPQTGAATPTSCSFNPRLENSFATGGEDGKVR 1231          
BLAST of mRNA_S-dermatodea_contig82604.16460.1 vs. uniprot
Match: I2G540_USTH4 (Uncharacterized protein n=3 Tax=Ustilago TaxID=5269 RepID=I2G540_USTH4)

HSP 1 Score: 77.4 bits (189), Expect = 1.340e-14
Identity = 39/75 (52.00%), Postives = 47/75 (62.67%), Query Frame = 0
Query:   18 RVMRGHNGDVVDLSWSPNAFLLSAGRDGSLRLWHPGRLGCVHLFAQTGAATPTSCAFHPRLENSFATAGEDGKVR 92
            RV   H+GDV+DLSWS N FLLS   D + +LWHP R  C+  FA   AAT +S  FHP  +  F T G DGK+R
Sbjct:  413 RVFAAHSGDVLDLSWSKNNFLLSCSSDKTAKLWHPNRSECLCTFAT--AATVSSVDFHPTDDRFFVTGGLDGKLR 485          
BLAST of mRNA_S-dermatodea_contig82604.16460.1 vs. uniprot
Match: M9M194_PSEA3 (WD40 repeat-containing protein n=3 Tax=Moesziomyces TaxID=63261 RepID=M9M194_PSEA3)

HSP 1 Score: 77.4 bits (189), Expect = 1.360e-14
Identity = 39/75 (52.00%), Postives = 47/75 (62.67%), Query Frame = 0
Query:   18 RVMRGHNGDVVDLSWSPNAFLLSAGRDGSLRLWHPGRLGCVHLFAQTGAATPTSCAFHPRLENSFATAGEDGKVR 92
            RV  GH GDV+DLSWS N FLLS   D + +LWHP R  C+  F+   AA  +S  FHPR +  F T G DGK+R
Sbjct:  596 RVFAGHVGDVMDLSWSKNNFLLSCSSDKTAKLWHPNRAECLCTFST--AAIVSSVDFHPRDDRFFVTGGLDGKLR 668          
BLAST of mRNA_S-dermatodea_contig82604.16460.1 vs. uniprot
Match: A0A4U7L1T4_9BASI (Uncharacterized protein n=1 Tax=Sporisorium graminicola TaxID=280036 RepID=A0A4U7L1T4_9BASI)

HSP 1 Score: 77.0 bits (188), Expect = 1.850e-14
Identity = 39/74 (52.70%), Postives = 46/74 (62.16%), Query Frame = 0
Query:   19 VMRGHNGDVVDLSWSPNAFLLSAGRDGSLRLWHPGRLGCVHLFAQTGAATPTSCAFHPRLENSFATAGEDGKVR 92
            V  GH GDV+DLSWS N FLLS   D + RLWHP R  C+  F  T +AT +S  FHP  +  F T G DGK+R
Sbjct:  554 VFAGHTGDVLDLSWSKNNFLLSCSSDKTARLWHPNRSDCLCTF--TTSATVSSVDFHPVDDRFFVTGGLDGKLR 625          
BLAST of mRNA_S-dermatodea_contig82604.16460.1 vs. uniprot
Match: V5GKH9_KALBG (Uncharacterized protein n=1 Tax=Kalmanozyma brasiliensis (strain GHG001) TaxID=1365824 RepID=V5GKH9_KALBG)

HSP 1 Score: 76.6 bits (187), Expect = 2.390e-14
Identity = 37/74 (50.00%), Postives = 47/74 (63.51%), Query Frame = 0
Query:   19 VMRGHNGDVVDLSWSPNAFLLSAGRDGSLRLWHPGRLGCVHLFAQTGAATPTSCAFHPRLENSFATAGEDGKVR 92
            V  GH+GD++DLSWS N FLLS G D + +LWHP R  C+  F  T +A  +S  FHP  +  F T G DGK+R
Sbjct:  154 VFAGHSGDILDLSWSKNNFLLSCGSDKTAKLWHPNREDCLCTF--TTSAVVSSIDFHPTDDRFFVTGGLDGKLR 225          
BLAST of mRNA_S-dermatodea_contig82604.16460.1 vs. uniprot
Match: A0A077R3E4_9BASI (Wd repeat protein n=1 Tax=Melanopsichium pennsylvanicum 4 TaxID=1398559 RepID=A0A077R3E4_9BASI)

HSP 1 Score: 76.6 bits (187), Expect = 2.520e-14
Identity = 37/75 (49.33%), Postives = 47/75 (62.67%), Query Frame = 0
Query:   18 RVMRGHNGDVVDLSWSPNAFLLSAGRDGSLRLWHPGRLGCVHLFAQTGAATPTSCAFHPRLENSFATAGEDGKVR 92
            R+  GH GDV+DLSWS N FLLS   D + +LWHP R GC+  F+ +  AT +S  FHP  +  F T G D K+R
Sbjct:  570 RIFSGHTGDVLDLSWSKNNFLLSCSSDKTAKLWHPNRTGCLCTFSTS--ATVSSVDFHPTDDRFFVTGGLDCKLR 642          
BLAST of mRNA_S-dermatodea_contig82604.16460.1 vs. uniprot
Match: A0A5C3DRX1_9BASI (Uncharacterized protein n=1 Tax=Ustilago trichophora TaxID=86804 RepID=A0A5C3DRX1_9BASI)

HSP 1 Score: 75.1 bits (183), Expect = 8.780e-14
Identity = 36/75 (48.00%), Postives = 47/75 (62.67%), Query Frame = 0
Query:   18 RVMRGHNGDVVDLSWSPNAFLLSAGRDGSLRLWHPGRLGCVHLFAQTGAATPTSCAFHPRLENSFATAGEDGKVR 92
            R+  GH+GDV+DLSWS N FLLS   D + +LWHP R  C+  F+ +  A  +S  FHP  +  F T G DGK+R
Sbjct:  575 RIFAGHSGDVLDLSWSKNNFLLSCSSDKTAKLWHPNRSDCLCTFSTS--AIVSSIDFHPTDDRFFVTGGLDGKLR 647          
BLAST of mRNA_S-dermatodea_contig82604.16460.1 vs. uniprot
Match: E6ZKT8_SPORE (Uncharacterized protein n=2 Tax=Sporisorium reilianum TaxID=72558 RepID=E6ZKT8_SPORE)

HSP 1 Score: 74.7 bits (182), Expect = 1.180e-13
Identity = 38/74 (51.35%), Postives = 45/74 (60.81%), Query Frame = 0
Query:   19 VMRGHNGDVVDLSWSPNAFLLSAGRDGSLRLWHPGRLGCVHLFAQTGAATPTSCAFHPRLENSFATAGEDGKVR 92
            V  GH GDV+DLSWS N FLLS   D + RLWHP R  C+  F  T +A  +S  FHP  +  F T G DGK+R
Sbjct:  382 VFAGHTGDVLDLSWSKNNFLLSCSSDKTARLWHPNRSDCLCTF--TTSAIVSSVDFHPVDDRFFVTGGLDGKLR 453          
BLAST of mRNA_S-dermatodea_contig82604.16460.1 vs. uniprot
Match: A0A5C3DT80_9BASI (Uncharacterized protein n=1 Tax=Ustilago trichophora TaxID=86804 RepID=A0A5C3DT80_9BASI)

HSP 1 Score: 74.7 bits (182), Expect = 1.200e-13
Identity = 36/75 (48.00%), Postives = 46/75 (61.33%), Query Frame = 0
Query:   18 RVMRGHNGDVVDLSWSPNAFLLSAGRDGSLRLWHPGRLGCVHLFAQTGAATPTSCAFHPRLENSFATAGEDGKVR 92
            R+  GH GDV+DLSWS N FLLS   D + +LWHP R  C+  F+ +  A  +S  FHP  +  F T G DGK+R
Sbjct:  575 RIFAGHGGDVLDLSWSKNNFLLSCSSDKTAKLWHPNRSDCLCTFSTS--AIVSSIDFHPTDDRFFVTGGLDGKLR 647          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig82604.16460.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LMN8_ECTSI6.570e-4686.96WD repeat protein (Partial) (Fragment) n=1 Tax=Ect... [more]
A0A6H5KWS7_9PHAE6.610e-4686.96Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
I2G540_USTH41.340e-1452.00Uncharacterized protein n=3 Tax=Ustilago TaxID=526... [more]
M9M194_PSEA31.360e-1452.00WD40 repeat-containing protein n=3 Tax=Moesziomyce... [more]
A0A4U7L1T4_9BASI1.850e-1452.70Uncharacterized protein n=1 Tax=Sporisorium gramin... [more]
V5GKH9_KALBG2.390e-1450.00Uncharacterized protein n=1 Tax=Kalmanozyma brasil... [more]
A0A077R3E4_9BASI2.520e-1449.33Wd repeat protein n=1 Tax=Melanopsichium pennsylva... [more]
A0A5C3DRX1_9BASI8.780e-1448.00Uncharacterized protein n=1 Tax=Ustilago trichopho... [more]
E6ZKT8_SPORE1.180e-1351.35Uncharacterized protein n=2 Tax=Sporisorium reilia... [more]
A0A5C3DT80_9BASI1.200e-1348.00Uncharacterized protein n=1 Tax=Ustilago trichopho... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 13..51
e-value: 2.5E-7
score: 40.3
IPR001680WD40 repeatPFAMPF00400WD40coord: 17..50
e-value: 4.6E-7
score: 30.4
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 20..50
score: 13.349
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 7..92
e-value: 2.3E-16
score: 62.0
IPR040324WD repeat-containing protein WDR44/Dgr2PANTHERPTHR14221WD REPEAT DOMAIN 44coord: 17..92
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 20..92
score: 13.343
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 14..92

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig82604contigS-dermatodea_contig82604:145..420 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig82604.16460.1mRNA_S-dermatodea_contig82604.16460.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig82604 145..420 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig82604.16460.1 ID=prot_S-dermatodea_contig82604.16460.1|Name=mRNA_S-dermatodea_contig82604.16460.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=92bp
PPLPVPTGELVMGGRASRVMRGHNGDVVDLSWSPNAFLLSAGRDGSLRLW
HPGRLGCVHLFAQTGAATPTSCAFHPRLENSFATAGEDGKVR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR040324WDR44/Dgr2
IPR017986WD40_repeat_dom
IPR036322WD40_repeat_dom_sf