prot_S-dermatodea_contig8260.16459.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig8260.16459.1
Unique Nameprot_S-dermatodea_contig8260.16459.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length102
Homology
BLAST of mRNA_S-dermatodea_contig8260.16459.1 vs. uniprot
Match: D7FVY8_ECTSI (Zinc finger, FYVE domain containing 19, isoform CRA_g n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVY8_ECTSI)

HSP 1 Score: 100 bits (249), Expect = 5.620e-23
Identity = 57/99 (57.58%), Postives = 67/99 (67.68%), Query Frame = 0
Query:    5 RDRRERR--PPDEEESSSWCGICSEDAAVRCRQCEADNGCGDADDDDEPELFCARCFKEVHRGDPEMMAHRPEALSRSGRKGQGKGEGGERKGWRNWRK 101
            RDRR+    P DE  SSSWC ICSEDA++RCR CE +NG       DEPELFCARCFKE HRGD EM  H+P+ALSR+ ++     E   RKG R WR+
Sbjct:  303 RDRRQAAACPKDEALSSSWCCICSEDASLRCRPCERENG------QDEPELFCARCFKETHRGDSEMEVHQPQALSRARQQ-----EEDGRKGRRTWRR 390          
BLAST of mRNA_S-dermatodea_contig8260.16459.1 vs. uniprot
Match: A0A1B7P222_9EURO (Uncharacterized protein n=1 Tax=Emergomyces africanus TaxID=1955775 RepID=A0A1B7P222_9EURO)

HSP 1 Score: 51.6 bits (122), Expect = 2.050e-5
Identity = 26/64 (40.62%), Postives = 35/64 (54.69%), Query Frame = 0
Query:   21 WCGICSEDAAVRCRQCEADNGCGDADDDDEPELFCARCFKEVH--RGDPEMMAHRPEALSRSGR 82
            WC ICS+DA+V+C  C+A+             L+C+RC++EVH   GD E  AHR     R  R
Sbjct:  283 WCCICSDDASVKCVNCDAEL------------LYCSRCWREVHVEEGDAEEKAHRQVRFERDNR 334          
BLAST of mRNA_S-dermatodea_contig8260.16459.1 vs. uniprot
Match: F7VUN9_SORMK (WGS project CABT00000000 data, contig 2.8 n=1 Tax=Sordaria macrospora (strain ATCC MYA-333 / DSM 997 / K(L3346) / K-hell) TaxID=771870 RepID=F7VUN9_SORMK)

HSP 1 Score: 51.2 bits (121), Expect = 2.980e-5
Identity = 30/80 (37.50%), Postives = 43/80 (53.75%), Query Frame = 0
Query:   15 EEESSSWCGICSEDAAVRCRQCEADNGCGDADDDDEPELFCARCFKEVHRGDP---EMMAHRPEALS--RSGRKGQGKGE 89
            +E+   WC +C EDA +RC       GC D +D    E++C RC++E+H G     E   HR   L+  ++G KG G GE
Sbjct:  405 DEDVKKWCTVCLEDATIRCE------GCEDFEDGGGGEVYCVRCWREMHVGPAAGWEERGHRWFRLNTTKNGGKGTGMGE 478          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig8260.16459.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FVY8_ECTSI5.620e-2357.58Zinc finger, FYVE domain containing 19, isoform CR... [more]
A0A1B7P222_9EURO2.050e-540.63Uncharacterized protein n=1 Tax=Emergomyces africa... [more]
F7VUN9_SORMK2.980e-537.50WGS project CABT00000000 data, contig 2.8 n=1 Tax=... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSUPERFAMILY57845B-box zinc-binding domaincoord: 20..81

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig8260contigS-dermatodea_contig8260:1807..2112 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig8260.16459.1mRNA_S-dermatodea_contig8260.16459.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig8260 1807..2277 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig8260.16459.1 ID=prot_S-dermatodea_contig8260.16459.1|Name=mRNA_S-dermatodea_contig8260.16459.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=102bp
AGRARDRRERRPPDEEESSSWCGICSEDAAVRCRQCEADNGCGDADDDDE
PELFCARCFKEVHRGDPEMMAHRPEALSRSGRKGQGKGEGGERKGWRNWR
K*
back to top