mRNA_S-dermatodea_contig826.16457.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
|
Overview
Homology
BLAST of mRNA_S-dermatodea_contig826.16457.1 vs. uniprot
Match: A0A6H5JGU8_9PHAE (MEP1 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGU8_9PHAE) HSP 1 Score: 503 bits (1296), Expect = 6.410e-174 Identity = 250/436 (57.34%), Postives = 312/436 (71.56%), Query Frame = 1
Query: 1 VLDDSNDIVTTPTEFTGKWLMTAELHVTSGAVFYCRGSAVGGDCDELRIQSTGSDDFHEIRGHGGSLYFDSTVVTSWDTPNKTPQADYEDGRSFINCVSEYESDETCEGQPQNDLGECRMDIIDSEMGYLGWFDAESYGLTWKVR---------GFCSDKTNPEVFDTTNVYGDIQGSNIHHMYYGMYSYGHQGGVWTDNEMHDNHQYGFDPHDDSDFLTIANNXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGADAAGIFLHRSSDSCKXXXXXXHDMQDAGIAIMESFDAEIYDNTITNVKYGIRISLGGGNNQIYDNTFDTCSKYGFFTYAGSDEPEKTDDGRPGENYFTDNQVLSTSTGLKFKRSDNLVVTGNTFTGTEEIQLHDAQATTWSDNIMPSSACTNYITGDDDDGSEIPESTFTTGSSGLPATEC 1281
+LD S +T PT T KWL+ AEL+VT+GA+FYC GS GGDCDELRIQSTG DD++E+RGHGGS+YF TVVTSWDTPNK PQ YE GRSF+NCVSE + ETC+G +ND+GECRMDII+SEMGY+G+FD+ESYGLTWKVR GFC D +NP+VF+TTNVYGDI+ S+IHHMYYG YSYGHQGGVWT+NEMHDNHQY +ANN GG DA GIFLHRSSD+ + +M DAGIA++ESF+A+I+DN I V++GIR+SLG G N +YDN F+ CS +G +TY GSDEP+ ++ GRP N F +N+V +++ G+KFK SDN+VVT N FTGTEE++ +DAQATTWS N +PS C + IT DD G+ +P STF++ SSG+P+ EC
Sbjct: 46 MLDGSGSKITAPTSVTKKWLLEAELYVTNGAIFYCIGSEEGGDCDELRIQSTGPDDWYEVRGHGGSMYFSHTVVTSWDTPNKQPQETYEGGRSFLNCVSEKLTGETCDGMAKNDMGECRMDIINSEMGYMGFFDSESYGLTWKVRRQAGRGVVRGFCKDLSNPDVFETTNVYGDIKNSDIHHMYYGHYSYGHQGGVWTNNEMHDNHQY------------VANNKVYNNYNHGIIASKRCNNVKIYDNQVSDGGPDAVGIFLHRSSDNAEVYGNKIWNMPDAGIALLESFNADIHDNEIDGVQFGIRMSLGSGGNSVYDNEFNDCSDWGLYTYMGSDEPDVSN-GRPNGNTFNNNKVTNSAGGVKFKNSDNIVVTNNEFTGTEELEFYDAQATTWSGNSLPSGVCIDNITSDD--GNSVPPSTFSS-SSGVPSEEC 465
BLAST of mRNA_S-dermatodea_contig826.16457.1 vs. uniprot
Match: D8LRM4_ECTSI (Mannuronan C-5-epimerase N-terminal n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRM4_ECTSI) HSP 1 Score: 504 bits (1298), Expect = 2.320e-173 Identity = 247/429 (57.58%), Postives = 305/429 (71.10%), Query Frame = 1
Query: 4 LDDSNDIVTTPTEFTGKWLMTAELHVTSGAVFYCRGSAVGGDCDELRIQSTGSDDFHEIRGHGGSLYFDSTVVTSWDTPNKTPQADYEDGRSFINCVSEYESDETCEGQPQNDLGECRMDIIDSEMGYLGWFDAESYGLTWKVRGFCSDKTNPEVFDTTNVYGDIQGSNIHHMYYGMYSYGHQGGVWTDNEMHDNHQYGFDPHDDSDFLT--IANNXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGADAAGIFLHRSSDSCKXXXXXXHDMQDAGIAIMESFDAEIYDNTITNVKYGIRISLGGGNNQIYDNTFDTCSKYGFFTYAGSDEP-EKTDDGRPGENYFTDNQVLSTSTGLKFKRSDNLVVTGNTFTGTEEIQLHDAQATTWSDNIMPSSACTNYITGDDDDGSEIPESTFTTGSSGLPATEC 1281
LDDS + V P + KWL+TAELH+T GAVFYCRGS++GGDCDELRIQSTG DFHE+R HGGS+YF+ST+VTSWDTPNKTPQA Y GRSF+NCVSE + E C GQ QN++GECRMDII+SE+GYLG+FD+ESYGLTWKVRGFC D +NP+VFDTTNVYG++ GS+IHH YYG YSYGHQGGVW +N+MHDNHQYGFDPHDDSD+LT IA+ GG AAGIFLHRSSD HDMQDAG+A++ES +A+IY+N ++VK+GIR+SLG N +++N F+ S G +TY GSDEP + DGRP +N F +N++L+ + G+K K D+ V+T N FTGT E++ DAQ T W N +P C I DDG +I STF ++GLP EC
Sbjct: 111 LDDSYNTVLNPKVLSNKWLLTAELHITGGAVFYCRGSSIGGDCDELRIQSTGPTDFHEVRAHGGSMYFESTIVTSWDTPNKTPQATYVGGRSFLNCVSEKLTGEVCVGQAQNEMGECRMDIINSEIGYLGYFDSESYGLTWKVRGFCKDLSNPDVFDTTNVYGNLIGSDIHHNYYGQYSYGHQGGVWHNNQMHDNHQYGFDPHDDSDYLTSIIASKRCNNVQIYNNEVYD--------------GGPFAAGIFLHRSSDYAIVHDNVVHDMQDAGMAMLESMNADIYNNRFSSVKFGIRLSLGSSENHVHENLFEDVSTQGLYTYQGSDEPTDGVSDGRPSDNLFENNRILNVTKGVKIKEGDDTVITDNVFTGTSELEFFDAQNTRWKGNTLPQGVCIKNI--HSDDGIDIELSTFDRRTAGLPTLEC 523
BLAST of mRNA_S-dermatodea_contig826.16457.1 vs. uniprot
Match: D7FIU4_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIU4_ECTSI) HSP 1 Score: 445 bits (1145), Expect = 1.770e-152 Identity = 239/427 (55.97%), Postives = 291/427 (68.15%), Query Frame = 1
Query: 1 VLDDSNDIVTTPTEFTGKWLMTAELHVTSGAVFYCRGSAVGGDCDELRIQSTGSDDFHEIRGHGGSLYFDSTVVTSWDTPNKTPQADYEDGRSFINCVSEYESDETCEGQPQNDLGECRMDIIDSEMGYLGWFDAESYGLTWKVRGFCSDKTNPEVFDTTNVYGDIQGSNIHHMYYGMYSYGHQGGVWTDNEMHDNHQYGFDPHDDSDFLTIANNXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGADAAGIFLHRSSDSCKXXXXXXHDMQDAGIAIMESFDAEIYDNTITNVKYGIRISLGGGNNQIYDNTFDTCSKYGFFTYAGSDEPEKTDDGRPGENYFTDNQVLSTSTGLKFKRSDNLVVTGNTFTGTEEIQLHDAQATTWSDNIMPSSACTNYITGDDDDGSEIPESTFTTGSSGLPATEC 1281
+LDDS + +T+PT T KWL+ +EL+VT GA+FYC GS GGDCDELRIQSTG DD++E+RGHGGS+YF TVVTSWDTPNK PQ YE GRSF+NCVSE + ETC+G+ +ND GECRMDII+SEMGY+G+FDAESYGLTWKVRGFC D +NP+VF+TTNVYGDI+ SNIHHMYYGMYSYGHQGGVWT+NEMHDNHQYGFDPHDDSD+LTIA XXXXXXXXXXX GG +A GIFLHRSSD+ AE+Y G D P+ ++ GRP N F +N++ +T+ G+K K SDN+V++ N FTGTEE++ DAQATTWSDN +PS C + +T DD G+ +P STF++ SSG+P+ EC
Sbjct: 1 MLDDSGNKITSPTSVTKKWLLESELYVTDGAIFYCIGSEEGGDCDELRIQSTGPDDWYEVRGHGGSMYFSHTVVTSWDTPNKKPQETYEGGRSFLNCVSEKLTGETCDGKAKNDEGECRMDIINSEMGYMGFFDAESYGLTWKVRGFCKDLSNPDVFETTNVYGDIKNSNIHHMYYGMYSYGHQGGVWTNNEMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXASKRCNNVQIYNNEVSDGGPEAVGIFLHRSSDN-----------------------AEVYG--------------------------------GXXXXXXXDAPDVSN-GRPNGNTFNNNKITNTAGGVKIKNSDNIVISNNDFTGTEELEFFDAQATTWSDNSLPSGVCIDNVTSDD--GNSVPPSTFSS-SSGVPSEEC 368
BLAST of mRNA_S-dermatodea_contig826.16457.1 vs. uniprot
Match: D8LC73_ECTSI (Mannuronan C-5-epimerase 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC73_ECTSI) HSP 1 Score: 461 bits (1187), Expect = 7.510e-152 Identity = 221/389 (56.81%), Postives = 273/389 (70.18%), Query Frame = 1
Query: 1 VLDDSNDIVTTPTEFTGKWLMTAELHVTSGAVFYCRGSAVGGDCDELRIQSTGSDDFHEIRGHGGSLYFDSTVVTSWDTPNKTPQADYEDGRSFINCVSEYESDETCEGQPQNDLGECRMDIIDSEMGYLGWFDAESYGLTWKVRGFCSDKTNPEVFDTTNVYGDIQGSNIHHMYYGMYSYGHQGGVWTDNEMHDNHQYGFDPHDDSDFLTIANNXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGADAAGIFLHRSSDSCKXXXXXXHDMQDAGIAIMESFDAEIYDNTITNVKYGIRISLGGGNNQIYDNTFDTCSKYGFFTYAGSDEPEKTDDGRPGENYFTDNQVLSTSTGLKFKRSDNLVVTGNTFTGTEEIQLHDAQATTWSDN 1167
+LDD + P+ T WL+ AEL++T G VFYC+G++ GGDC++LRIQSTGSDDFHE+RGHGGSLYF+ T+VTSWDTPNK PQ YE+GRSF+NCVSE + + CEG +N++GECRMDII+SE+ YLG+FD+ESYG+TWKVRGFC D +NPEVF+ TNVYGD+ GS+IHH+YYG YSYGHQGGVWT+N+MHDN QYGFDPHDDSD+LTIA N GGA AAGIFLHRSSD +MQDAGIA++ESFDA+IY N I KYGIR+SLG GNN++Y N+F S+YG +TY GSDEP+ +D GRP N N V G+K K D+ NTF + + ++ T WS N
Sbjct: 473 MLDDDGTKLDIPSGITNNWLLAAELYITGGGVFYCKGTSAGGDCNQLRIQSTGSDDFHEVRGHGGSLYFEDTIVTSWDTPNKEPQETYENGRSFLNCVSEKLTGDDCEGNAKNEMGECRMDIINSEIAYLGYFDSESYGMTWKVRGFCKDLSNPEVFELTNVYGDLTGSDIHHLYYGHYSYGHQGGVWTNNKMHDNWQYGFDPHDDSDYLTIAYNEVYNNVNHGIIASKRCNNVKIFENEVRDGGAAAAGIFLHRSSDGAAVFDNTITNMQDAGIAMLESFDAQIYGNIINGAKYGIRMSLGSGNNEVYQNSFTDISQYGLYTYEGSDEPDVSD-GRPSGNVLALNLVEDCPIGVKIKEGDDNEFYQNTFINVDAFEFPESTNTMWSGN 860
BLAST of mRNA_S-dermatodea_contig826.16457.1 vs. uniprot
Match: D7FRR8_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRR8_ECTSI) HSP 1 Score: 442 bits (1137), Expect = 4.400e-150 Identity = 228/428 (53.27%), Postives = 285/428 (66.59%), Query Frame = 1
Query: 1 VLDDSNDIVTTPTEFTGKWLMTAELHVTSGAVFYCRGSAVGGDCDELRIQSTGSDDFHEIRGHGGSLYFDSTVVTSWDTPNKTPQADYEDGRSFINCVSEY-ESDETCEGQPQNDLGECRMDIIDSEMGYLGWFDAESYGLTWKVRGFCSDKTNPEVFDTTNVYGDIQGSNIHHMYYGMYSYGHQGGVWTDNEMHDNHQYGFDPHDDSDFLTIANNXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGADAAGIFLHRSSDSCKXXXXXXHDMQDAGIAIMESFDAEIYDNTITNVKYGIRISLGGGNNQIYDNTFDTCSKYGFFTYAGSDEPEKTDDGRPGENYFTDNQVLSTSTGLKFKRSDNLVVTGNTFTGTEEIQLHDAQATTWSDNIMPSSACTNYITGDDDDGSEIPESTFTTGSSGLPATEC 1281
VLD ++ + T T TGKWL+TA+L VT GA YCRG VGG+C ELRI+ST DF EIRGHGG+LYF+ T+VTSWD + PQ Y+DGRSFI CVSE ++TC N++GECRMDIIDSEMGYLG+ +E+YG+TWKVRGFCSD +NP+VFD NVYGD++GS+IHHMYYGMYS+GHQGGVWT+N MHDNHQYGFDPHDDSD+L IA N GGADAAGIFLHRS D + +M DAGIA++E+ +I+DN + ++GIR+ LG NN+++DN F G FTY GSDEP GRP +N F +N + +T TG+K K SDN+ +T N F+GT EI+ ++A WS N +P++ C I + STFT GSSGLP EC
Sbjct: 35 VLDSNDRVDETATTTTGKWLLTADLFVTGGATLYCRGKGVGGNCAELRIRSTSGSDFFEIRGHGGNLYFEDTIVTSWDVDGRKPQETYKDGRSFIRCVSEVLTGEDTC---AINNMGECRMDIIDSEMGYLGYDASEAYGITWKVRGFCSDLSNPDVFDDVNVYGDMKGSDIHHMYYGMYSFGHQGGVWTNNLMHDNHQYGFDPHDDSDYLIIAGNKVYNNVNHGIIASKRCNNVKIYDNEVYDGGADAAGIFLHRSGDDSEVYGNTITNMGDAGIAMLETSGCDIHDNQVDGGEFGIRVHLGSSNNKVHDNVFKNIWNVGMFTYVGSDEPW-VGGGRPCDNEFYNNTIQATETGVKIKESDNISITNNAFSGTTEIEFNNAIDIVWSGNSIPTNTCLEDIDNN---------STFT-GSSGLPL-EC 447
BLAST of mRNA_S-dermatodea_contig826.16457.1 vs. uniprot
Match: A0A6H5KWQ2_9PHAE (MEP2 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWQ2_9PHAE) HSP 1 Score: 398 bits (1022), Expect = 5.210e-134 Identity = 193/328 (58.84%), Postives = 235/328 (71.65%), Query Frame = 1
Query: 1 VLDDSNDIVTTPTEFTGKWLMTAELHVTSGAVFYCRGSAVGGDCDELRIQSTGSDDFHEIRGHGGSLYFDSTVVTSWDTPNKTPQADYEDGRSFINCVSEYESDETCEGQPQNDLGECRMDIIDSEMGYLGWFDAESYGLTWK--------VRGFCSDKTNPEVFDTTNVYGDIQGSNIHHMYYGMYSYGHQGGVWTDNEMHDNHQYGFDPHDDSDFLT--IANNXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGADAAGIFLHRSSDSCKXXXXXXHDMQDAGIAIMESFDAEIYDNTITNVKYGIRISLGGGNNQIYDNTFDTCSK 954
+LDD + P+ T WL+ AEL++T G VFYC+G++ GGDC++LRIQSTGSDDFHE+RGHGGSLYF+ T+VTSWDTPNK PQ YE GRSF+NCVSE + + CEG +N++GECRMDII+SE+ YLG+FD+ESYG+TWK VRGFC D +NPEVFD TNVYGD+ GS+IHH+YYG YSYGHQGGVWT+N+MHDN QYGFDPHDDSD+LT IA+ GGA A GIFLHRSSD +MQDAGIA++E+FDA+IY NTI KYGIR+SLG GNN +Y N+F S+
Sbjct: 22 MLDDDGTKLDIPSGITNNWLLAAELYITGGGVFYCKGTSAGGDCNQLRIQSTGSDDFHEVRGHGGSLYFEDTIVTSWDTPNKEPQETYEGGRSFLNCVSEKLTGDDCEGNAKNEMGECRMDIINSEIAYLGYFDSESYGMTWKARLTRGFPVRGFCKDLSNPEVFDLTNVYGDLIGSDIHHLYYGHYSYGHQGGVWTNNKMHDNWQYGFDPHDDSDYLTRIIASKRCNNVKIFENEVRD--------------GGAAAVGIFLHRSSDDAAVFDNTITNMQDAGIALLEAFDAQIYGNTINGAKYGIRMSLGSGNNVVYQNSFTDISQ 335
BLAST of mRNA_S-dermatodea_contig826.16457.1 vs. uniprot
Match: D7G8D9_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8D9_ECTSI) HSP 1 Score: 365 bits (937), Expect = 1.980e-117 Identity = 198/401 (49.38%), Postives = 246/401 (61.35%), Query Frame = 1
Query: 1 VLDDSNDIVT-TPTEFTGKWLMTAELHVTSGAVFYCRGSAVGGDCDELRIQSTGSDDFHEIRGHGGSLYFDSTVVTSWDTPNKTPQADYEDGRSFINCVSEYESDET--CEGQPQNDLGECRMDIIDSEMGYLGWFDAESYGLTWKVRGFCSDKT------NPEVFDTTNVYGDIQGSNIHHMYYGMYSYGHQGGVWTDNEMHDNHQYGFDPHDDSDFLTIANNXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGADAAGIFLHRSSDSCKXXXXXXHDMQDAGIAIMESFDAEIYDNTITNVKYGIRISLGGGNNQIYDNTFDTCSKYGFFTYAGSDEPE-KTDDGRPGENYFTDNQVLST--STGLKFKRSDNLVVTGNTFTGTEEIQLHDAQATTWSDN 1167
VLD++ND+V TPT G WL+ L V G+ G+A GD D LR+ ST SDDF E+RG+GG+L+F ST VTSWDT N + DGRSFINCV++++ C+G+ + GECRMDII S MG +GWFDAESYGLTWKVRG C N E+F+ NVYGDI S I+ MYYG YSYGHQGGVW N M DN QYGFDPHDDSD LTI+NN GG DA GIFLHRSSD + ++MQDAG+A+MES+DA IYDN+ TN +YGIR+SLG G N I +N F ++YG +TY GSD+P+ +GRP +N F N + + + G+ K D+ V N FTG + D+ TTW DN
Sbjct: 216 VLDENNDVVGGTPT---GYWLLDRNLRVVDGSTLLVHGTAASGDADVLRLLST-SDDFIEVRGYGGNLHFQSTTVTSWDTDNGQEREWDGDGRSFINCVTQFDDSAIWDCDGRSNQEWGECRMDIISSTMGNMGWFDAESYGLTWKVRGACEIDPDTGVPYNHEIFEDHNVYGDILNSEIYGMYYGHYSYGHQGGVWDSNIMRDNIQYGFDPHDDSDDLTISNNIVYGNGNHGIIASKRCNNVKIFNNEVYDGGEDAVGIFLHRSSDGAEVHDNVVYNMQDAGMAMMESYDANIYDNSFTNCRYGIRLSLGSGRNIITNNLFSGITQYGLYTYMGSDDPDVPNSNGRPSDNVFDGNTIETDGDNIGVHIKEGDSNVFIDNVFTGVSTYEFEDSSDTTWVDN 612
BLAST of mRNA_S-dermatodea_contig826.16457.1 vs. uniprot
Match: A0A6H5JNF5_9PHAE (MEP13 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNF5_9PHAE) HSP 1 Score: 363 bits (933), Expect = 1.810e-114 Identity = 196/400 (49.00%), Postives = 249/400 (62.25%), Query Frame = 1
Query: 10 DSNDIVTTPTEFTGKWLMTAELHVTSGAVFYCRGSAVGGDCDELRIQSTGSDDFHEIRGHGGSLYFDSTVVTSWDTPNKTPQADYEDGRSFINCVSEYESD--ETCEGQPQNDLGECRMDIIDSEMGYLGWFDAESYGLTWKVRGFCSDKTNPEVFDTTNVYGDIQGSNIHHMYYGMYSYGHQGGVWTDNEMHDNHQYGFDPHDDSDFLTIANNXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGADAAGIFLHRSSDSCKXXXXXXHDMQDAGIAIMESFDAEIYDNTITNVKYGIRISLGGGNNQIYDNTFDTCSKYGFFTYAGSDEPE--KTDDGRPGENYFTDNQVLSTSTGLKFKRSDNLVVTGNTF---TGTEEIQLHDAQATTWSDNIMPSSAC 1188
DSND V + TG WL+ ++HV G++ G GGD LRIQSTGS D++EIRGHGGSL F T VTSWDT K +Y+ RSFI CVSE +D +TC+G N +GECRMDII SEMG +G+ AESYG++WKVRG+CS+ NPEVF+ T V GDI S+I+ MYYG YS+GH GG+WT N+MHDN QYGFDPHDDSD L IA N GG A GIFLHRSSD C+ +DM+DAG+AIMES A I+DNT TNVKYGIR+S+G N + +N+F C +YG +TY G+D+PE K DG +N F N V G+K ++++ +V T N F + EE + D + W++N +P C
Sbjct: 430 DSNDNVVGGSP-TGYWLLMRDIHVEEGSLLQVHGPDAGGDARVLRIQSTGSRDYYEIRGHGGSLSFMDTKVTSWDTDEKKVNTNYKKERSFIRCVSEELADKPDTCDGHAVNHMGECRMDIIRSEMGEMGYDAAESYGISWKVRGYCSEDPNPEVFERTRVRGDIIDSDIYGMYYGHYSFGHDGGIWTGNKMHDNAQYGFDPHDDSDNLEIAYNTVWGNGNHGIIASKRCNNVKIHHNTVYDGGEGAVGIFLHRSSDDCEVWGNTVYDMKDAGMAIMESMGAHIHDNTFTNVKYGIRLSVGAARNIVENNSFLECDQYGIYTYQGNDKPEASKDWDGLLVDNTFHANTVEG---GVKIQKAEGIVFTDNNFYEHSSGEEYRFEDCEDVVWTNNRVPDDIC 825
BLAST of mRNA_S-dermatodea_contig826.16457.1 vs. uniprot
Match: D7FWE8_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWE8_ECTSI) HSP 1 Score: 351 bits (901), Expect = 9.750e-110 Identity = 203/395 (51.39%), Postives = 245/395 (62.03%), Query Frame = 1
Query: 1 VLDDSNDIVTT---PTEFTGKWLMTAELHVTSGAVFYCRGSAVGGDCDELRIQSTGSDDFHEIRGHGGSLYFDSTVVTSWDTPNKTPQADYEDGRSFINCVSEYESDE--TCEGQPQNDLGECRMDIIDSEMGYLGWFDAESYGLTWKVRGFCSDKTNPEVFDTTNVYGDIQGSNIHHMYYGMYSYGHQGGVWTDNEMHDNHQYGFDPHDDSDFLTIANNXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGADAAGIFLHRSSDSCKXXXXXXHDMQDAGIAIMESFDAEIYDNTITNVKYGIRISLGGGNNQIYDNTFDTCSKYGFFTYAGSDEPEKT-DDGRPGENYFTDNQVLSTSTGLKFKRSDNLVVTGNTFTGTEEIQLHDAQATTWSDN 1167
VLD SN+IV+ TG WL+T+ L + G Y G++ GGD D LRIQST DDF EIRG GGSL F T VTSWDT + +YE GRSFINCV++++ + +C G+ + GECRMDIIDS MG +GWFDAESYGLTWKVRG CSD +N E+ D NVYGDI+GS I+ MYYGMYSYGHQGGVWTDN M DN YGFDPHDDSD LTIA N XXXXXX XXXXXX A+MESF AEIYDNTI N KYGIR+SLG +N I+DNTFD+ S YG +TY GSD+P+ + +DGR +N F N + +T +K K D+ T N F + + D+ T W++N
Sbjct: 433 VLDSSNNIVSGGGGSASPTGYWLLTSSLEILDGVTLYVHGTSAGGDADVLRIQST-DDDFWEIRGWGGSLSFLETTVTSWDTDKGEERTEYEGGRSFINCVTQFDDSDIWSCSGRSNKERGECRMDIIDSTMGNMGWFDAESYGLTWKVRGLCSDLSNVEIMDDHNVYGDIKGSEIYGMYYGMYSYGHQGGVWTDNVMRDNILYGFDPHDDSDDLTIAGNTVYGNGNHGIIASKRCNNVEIYXXXXXX--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALMESFRAEIYDNTIENCKYGIRLSLGSADNDIHDNTFDSSSTYGLYTYKGSDDPDVSGNDGRVKDNSFDANTISNTDVAMKIKEGDDNSFTNNVFENVKTFEFEDSTDTVWTNN 824
BLAST of mRNA_S-dermatodea_contig826.16457.1 vs. uniprot
Match: D7G339_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G339_ECTSI) HSP 1 Score: 336 bits (861), Expect = 1.380e-107 Identity = 172/360 (47.78%), Postives = 219/360 (60.83%), Query Frame = 1
Query: 37 TEFTGKWLMTAELHVTSGAVFYCRGSAVGGDCDELRIQSTGSDDFHEIRGHGGSLYFDSTVVTSWDTPNKTPQADYEDGRSFINCVSEY--ESDETCEGQPQNDLGECRMDIIDSEMGYLGWFDAESYGLTWKVRGFCSDKTNPEVFDTTNVYGDIQGSNIHHMYYGMYSYGHQGGVWTDNEMHDNHQYGFDPHDDSDFLTIANNXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGADAAGIFLHRSSDSCKXXXXXXHDMQDAGIAIMESFDAEIYDNTITNVKYGIRISLGGGNNQIYDNTFDTCSKYGFFTYAGSDEPEKTDDGRPGENYFTDNQVLSTSTGLKFKRSDNLVVTGNTF 1110
T TG WL+T EL+V G GS GGD DELR+ ST ++ F +R HGGSL F ST V SWDT +P D DGRS+I+ +SE + DETCEG +N +GE RMDI SE+GYLG++D+ESYGLTWKVRGFC DK+NPEVFD NVYG++ S+IHHM +G+Y+YGHQ G W N+MHDN YGFDPHDDSDFLTI +N G +AGIFLHRSSD HD DAG+A++ESF+A++ +NT N KYG+R S+G +N +NT ++Y ++Y G+DEP+ GR N F+ N +K K +D N F
Sbjct: 97 TSATGTWLLTEELYVEDGITLKVYGSEAGGDADELRLLST-NETFINLRAHGGSLDFVSTKVFSWDTSTNSPDEDETDGRSYISAISEIITDEDETCEGNAKNTMGEARMDIESSEIGYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRFSVGCADNVFSNNTISNNAEYNAYSYLGTDEPDVVSSGRSQNNVFSQNSFSGAEETIKIKEADGTQFLDNVF 455 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig826.16457.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig826.16457.1 >prot_S-dermatodea_contig826.16457.1 ID=prot_S-dermatodea_contig826.16457.1|Name=mRNA_S-dermatodea_contig826.16457.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=428bp VLDDSNDIVTTPTEFTGKWLMTAELHVTSGAVFYCRGSAVGGDCDELRIQback to top mRNA from alignment at S-dermatodea_contig826:12383..16954+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig826.16457.1 ID=mRNA_S-dermatodea_contig826.16457.1|Name=mRNA_S-dermatodea_contig826.16457.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=4572bp|location=Sequence derived from alignment at S-dermatodea_contig826:12383..16954+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig826:12383..16954+ >mRNA_S-dermatodea_contig826.16457.1 ID=mRNA_S-dermatodea_contig826.16457.1|Name=mRNA_S-dermatodea_contig826.16457.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=2568bp|location=Sequence derived from alignment at S-dermatodea_contig826:12383..16954+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |