prot_S-dermatodea_contig8244.16443.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig8244.16443.1
Unique Nameprot_S-dermatodea_contig8244.16443.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length64
Homology
BLAST of mRNA_S-dermatodea_contig8244.16443.1 vs. uniprot
Match: E0VU36_PEDHC (zinc_ribbon_16 domain-containing protein n=1 Tax=Pediculus humanus subsp. corporis TaxID=121224 RepID=E0VU36_PEDHC)

HSP 1 Score: 74.7 bits (182), Expect = 3.830e-14
Identity = 30/46 (65.22%), Postives = 32/46 (69.57%), Query Frame = 0
Query:    8 TTVDKWFRWCNLCRHGGHAHHINLWFETHDECGVKGCRCKCRSLDS 53
            + +  WF WC  CRHGGHA HIN WFE H EC V GC CKC SLDS
Sbjct:  784 SNLASWFTWCQSCRHGGHAGHINNWFEKHSECPVTGCCCKCFSLDS 829          
BLAST of mRNA_S-dermatodea_contig8244.16443.1 vs. uniprot
Match: A0A1J1I1K9_9DIPT (CLUMA_CG007622, isoform A (Fragment) n=1 Tax=Clunio marinus TaxID=568069 RepID=A0A1J1I1K9_9DIPT)

HSP 1 Score: 72.0 bits (175), Expect = 3.400e-13
Identity = 27/50 (54.00%), Postives = 32/50 (64.00%), Query Frame = 0
Query:    7 STTVDKWFRWCNLCRHGGHAHHINLWFETHDECGVKGCRCKCRSLDSPVL 56
            S    KWF WC  CRHGGH  H+  WF+TH EC V  C CKC ++D P+L
Sbjct:  788 SKPFQKWFSWCQTCRHGGHTEHLAEWFKTHTECPVTCCNCKCFAIDLPLL 837          
BLAST of mRNA_S-dermatodea_contig8244.16443.1 vs. uniprot
Match: A0A1W0WR72_HYPDU (WD repeat-containing protein mio n=1 Tax=Hypsibius dujardini TaxID=232323 RepID=A0A1W0WR72_HYPDU)

HSP 1 Score: 71.2 bits (173), Expect = 6.350e-13
Identity = 25/44 (56.82%), Postives = 30/44 (68.18%), Query Frame = 0
Query:   10 VDKWFRWCNLCRHGGHAHHINLWFETHDECGVKGCRCKCRSLDS 53
            ++KWF WC  CRHGGHA H+  WF  H EC V GC CKC  ++S
Sbjct:  823 IEKWFTWCQSCRHGGHASHLAEWFREHSECAVTGCSCKCMMIES 866          
BLAST of mRNA_S-dermatodea_contig8244.16443.1 vs. uniprot
Match: A0A7S3TXM9_EMIHU (Hypothetical protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3TXM9_EMIHU)

HSP 1 Score: 66.2 bits (160), Expect = 4.140e-12
Identity = 25/51 (49.02%), Postives = 32/51 (62.75%), Query Frame = 0
Query:    6 PSTTVDKWFRWCNLCRHGGHAHHINLWFETHDECGVKGCRCKCRSLDSPVL 56
            PS+ + +W  WC  CRHGGHA H+  WF  H  C V GC C+C  LD+ +L
Sbjct:   95 PSSGLGRWMVWCQSCRHGGHALHVEQWFARHTVCPVAGCDCQCALLDAGML 145          
BLAST of mRNA_S-dermatodea_contig8244.16443.1 vs. uniprot
Match: K0STE1_THAOC (zinc_ribbon_16 domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0STE1_THAOC)

HSP 1 Score: 66.6 bits (161), Expect = 5.580e-12
Identity = 23/44 (52.27%), Postives = 29/44 (65.91%), Query Frame = 0
Query:    7 STTVDKWFRWCNLCRHGGHAHHINLWFETHDECGVKGCRCKCRS 50
            S     W+ WC  C+HGGHAHH+N WFE H  C V GC C+C++
Sbjct:   79 SVPFSDWWSWCLKCKHGGHAHHLNSWFEKHSTCPVSGCDCRCQA 122          
BLAST of mRNA_S-dermatodea_contig8244.16443.1 vs. uniprot
Match: B3RQZ2_TRIAD (zinc_ribbon_16 domain-containing protein (Fragment) n=1 Tax=Trichoplax adhaerens TaxID=10228 RepID=B3RQZ2_TRIAD)

HSP 1 Score: 66.6 bits (161), Expect = 2.320e-11
Identity = 24/48 (50.00%), Postives = 29/48 (60.42%), Query Frame = 0
Query:    6 PSTTVDKWFRWCNLCRHGGHAHHINLWFETHDECGVKGCRCKCRSLDS 53
            P    + WF WC  CRHGGHA H+  WF  H+EC V+ C C C + DS
Sbjct:  294 PKKRFNSWFSWCQSCRHGGHATHMESWFANHNECPVQDCNCSCSARDS 341          
BLAST of mRNA_S-dermatodea_contig8244.16443.1 vs. uniprot
Match: A0A369S889_9METZ (WD repeat-containing protein mio-B n=1 Tax=Trichoplax sp. H2 TaxID=287889 RepID=A0A369S889_9METZ)

HSP 1 Score: 66.6 bits (161), Expect = 2.640e-11
Identity = 24/48 (50.00%), Postives = 29/48 (60.42%), Query Frame = 0
Query:    6 PSTTVDKWFRWCNLCRHGGHAHHINLWFETHDECGVKGCRCKCRSLDS 53
            P    + WF WC  CRHGGHA H+  WF  H+EC V+ C C C + DS
Sbjct:  412 PKKRFNSWFSWCQSCRHGGHATHMESWFANHNECPVQDCNCSCSARDS 459          
BLAST of mRNA_S-dermatodea_contig8244.16443.1 vs. uniprot
Match: R1BU66_EMIHU (zinc_ribbon_16 domain-containing protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1BU66_EMIHU)

HSP 1 Score: 66.2 bits (160), Expect = 3.690e-11
Identity = 25/51 (49.02%), Postives = 32/51 (62.75%), Query Frame = 0
Query:    6 PSTTVDKWFRWCNLCRHGGHAHHINLWFETHDECGVKGCRCKCRSLDSPVL 56
            PS+ + +W  WC  CRHGGHA H+  WF  H  C V GC C+C  LD+ +L
Sbjct:  944 PSSGLGRWMVWCQSCRHGGHALHVEQWFARHTVCPVAGCDCQCALLDAGML 994          
BLAST of mRNA_S-dermatodea_contig8244.16443.1 vs. uniprot
Match: A0A1Y2BYV4_9FUNG (zinc_ribbon_16 domain-containing protein n=1 Tax=Rhizoclosmatium globosum TaxID=329046 RepID=A0A1Y2BYV4_9FUNG)

HSP 1 Score: 63.5 bits (153), Expect = 3.250e-10
Identity = 23/44 (52.27%), Postives = 25/44 (56.82%), Query Frame = 0
Query:    5 PPSTTVDKWFRWCNLCRHGGHAHHINLWFETHDECGVKGCRCKC 48
            P     + WF WC  CRHGGHA H+  WF  HD C V GC C C
Sbjct:  527 PELQGFEGWFTWCQTCRHGGHAKHVQEWFRAHDGCPVAGCDCSC 570          
BLAST of mRNA_S-dermatodea_contig8244.16443.1 vs. uniprot
Match: A0A167LHG5_PHYB8 (zinc_ribbon_16 domain-containing protein n=1 Tax=Phycomyces blakesleeanus (strain ATCC 8743b / DSM 1359 / FGSC 10004 / NBRC 33097 / NRRL 1555) TaxID=763407 RepID=A0A167LHG5_PHYB8)

HSP 1 Score: 60.1 bits (144), Expect = 5.490e-9
Identity = 21/39 (53.85%), Postives = 25/39 (64.10%), Query Frame = 0
Query:   11 DKWFRWCNLCRHGGHAHHINLWFETHDECGVKGCRCKCR 49
            D WF WC  CRHGGHA H+  WF+ H  C V  C C+C+
Sbjct: 1019 DLWFTWCQTCRHGGHAVHMEDWFQKHSTCPVSNCICQCK 1057          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig8244.16443.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 15
Match NameE-valueIdentityDescription
E0VU36_PEDHC3.830e-1465.22zinc_ribbon_16 domain-containing protein n=1 Tax=P... [more]
A0A1J1I1K9_9DIPT3.400e-1354.00CLUMA_CG007622, isoform A (Fragment) n=1 Tax=Cluni... [more]
A0A1W0WR72_HYPDU6.350e-1356.82WD repeat-containing protein mio n=1 Tax=Hypsibius... [more]
A0A7S3TXM9_EMIHU4.140e-1249.02Hypothetical protein n=1 Tax=Emiliania huxleyi Tax... [more]
K0STE1_THAOC5.580e-1252.27zinc_ribbon_16 domain-containing protein n=1 Tax=T... [more]
B3RQZ2_TRIAD2.320e-1150.00zinc_ribbon_16 domain-containing protein (Fragment... [more]
A0A369S889_9METZ2.640e-1150.00WD repeat-containing protein mio-B n=1 Tax=Trichop... [more]
R1BU66_EMIHU3.690e-1149.02zinc_ribbon_16 domain-containing protein n=1 Tax=E... [more]
A0A1Y2BYV4_9FUNG3.250e-1052.27zinc_ribbon_16 domain-containing protein n=1 Tax=R... [more]
A0A167LHG5_PHYB85.490e-953.85zinc_ribbon_16 domain-containing protein n=1 Tax=P... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR031488WD repeat protein mio, zinc-ribbon like domainPFAMPF17034zinc_ribbon_16coord: 8..49
e-value: 5.1E-11
score: 42.9
NoneNo IPR availablePANTHERPTHR16453:SF9GATOR COMPLEX PROTEIN MIOScoord: 7..53
IPR037593MIOS/Sea4PANTHERPTHR16453WD40 DOMAIN-CONTAINING PROTEIN MIO FAMILY MEMBERcoord: 7..53

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig8244contigS-dermatodea_contig8244:7791..9150 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig8244.16443.1mRNA_S-dermatodea_contig8244.16443.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig8244 7725..9150 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig8244.16443.1 ID=prot_S-dermatodea_contig8244.16443.1|Name=mRNA_S-dermatodea_contig8244.16443.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=64bp
ERKQPPSTTVDKWFRWCNLCRHGGHAHHINLWFETHDECGVKGCRCKCRS
LDSPVLPPCLSMR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR031488Zn_ribbon_mio
IPR037593MIOS/Sea4