mRNA_S-dermatodea_contig8242.16441.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
|
Overview
Homology
BLAST of mRNA_S-dermatodea_contig8242.16441.1 vs. uniprot
Match: D7FLW3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLW3_ECTSI) HSP 1 Score: 202 bits (514), Expect = 4.740e-63 Identity = 95/112 (84.82%), Postives = 106/112 (94.64%), Query Frame = 1
Query: 1 VGQAVVFLDRDDFKSTWLGNKSIYRTRMAIADGGELVVMAPGVTKFGEDPAIDSLIRRFGYRTTPEIMDFLKETLELRNSLSAVAHLIHGSSEGRFTITYCPGGLTREEVEG 336
+ +AVVFLDRD+FKSTWLGNKSIYRTRMA+ADGGEL+VMAPGV KFGEDP ID+LIRR+GYRTTPEIM+FLK+ LEL+ SLSA AHLIHGSSEGRFTITYCPGGLTRE+VEG
Sbjct: 109 IQKAVVFLDRDEFKSTWLGNKSIYRTRMAMADGGELIVMAPGVAKFGEDPDIDALIRRYGYRTTPEIMEFLKKALELQKSLSAAAHLIHGSSEGRFTITYCPGGLTREDVEG 220
BLAST of mRNA_S-dermatodea_contig8242.16441.1 vs. uniprot
Match: A0A6H5J4J3_9PHAE (Lar_N domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J4J3_9PHAE) HSP 1 Score: 202 bits (514), Expect = 2.720e-61 Identity = 95/112 (84.82%), Postives = 106/112 (94.64%), Query Frame = 1
Query: 1 VGQAVVFLDRDDFKSTWLGNKSIYRTRMAIADGGELVVMAPGVTKFGEDPAIDSLIRRFGYRTTPEIMDFLKETLELRNSLSAVAHLIHGSSEGRFTITYCPGGLTREEVEG 336
+ +AVVFLDRD+FKSTWLGNKSIYRTRMA+ADGGEL+VMAPGV KFGEDP ID+LIRR+GYRTTPEIM+FLK+ LEL+ SLSA AHLIHGSSEGRFTITYCPGGLTRE+VEG
Sbjct: 263 IQKAVVFLDRDEFKSTWLGNKSIYRTRMAMADGGELIVMAPGVAKFGEDPDIDALIRRYGYRTTPEIMEFLKKALELQKSLSAAAHLIHGSSEGRFTITYCPGGLTREDVEG 374
BLAST of mRNA_S-dermatodea_contig8242.16441.1 vs. uniprot
Match: A0A3C0QUS3_9BACT (D-mannonate epimerase n=1 Tax=Bacteroidales bacterium TaxID=2030927 RepID=A0A3C0QUS3_9BACT) HSP 1 Score: 172 bits (435), Expect = 1.070e-49 Identity = 77/109 (70.64%), Postives = 96/109 (88.07%), Query Frame = 1
Query: 7 QAVVFLDRDDFKSTWLGNKSIYRTRMAIADGGELVVMAPGVTKFGEDPAIDSLIRRFGYRTTPEIMDFLKETLELRNSLSAVAHLIHGSSEGRFTITYCPGGLTREEVE 333
+ VV+LD D+FKSTWLGNKSIYRTRMAIADGGEL+V+APG+ +FGED IDSLIR++GYRTTPE++ + +E +L+N+LSA AHLIHGSSE RF+ITYCPG LT+ E+E
Sbjct: 263 KVVVYLDSDEFKSTWLGNKSIYRTRMAIADGGELIVLAPGLKEFGEDKQIDSLIRKYGYRTTPEVLQYTRENADLQNNLSAAAHLIHGSSENRFSITYCPGCLTQREIE 371
BLAST of mRNA_S-dermatodea_contig8242.16441.1 vs. uniprot
Match: S0DFM1_9ZZZZ (Lar_N domain-containing protein n=1 Tax=termite gut metagenome TaxID=433724 RepID=S0DFM1_9ZZZZ) HSP 1 Score: 172 bits (435), Expect = 1.350e-49 Identity = 79/114 (69.30%), Postives = 97/114 (85.09%), Query Frame = 1
Query: 7 QAVVFLDRDDFKSTWLGNKSIYRTRMAIADGGELVVMAPGVTKFGEDPAIDSLIRRFGYRTTPEIMDFLKETLELRNSLSAVAHLIHGSSEGRFTITYCPGGLTREEVEGGEME 348
+ VV+LD ++F+STWLGNKSIYRTRMAIADGGEL+VMAPG+ +FGEDPAID LIR++GYRTTPE+M F++E +LR +LS AHLIHG+SEGRF I Y PG L+REE+EG E
Sbjct: 274 KVVVWLDPEEFRSTWLGNKSIYRTRMAIADGGELIVMAPGLRQFGEDPAIDRLIRKYGYRTTPEVMRFVEENADLRENLSVAAHLIHGTSEGRFRIVYAPGHLSREEIEGVGFE 387
BLAST of mRNA_S-dermatodea_contig8242.16441.1 vs. uniprot
Match: A0A7X6SE71_9BACT (DUF2088 domain-containing protein n=1 Tax=Candidatus Marinimicrobia bacterium TaxID=2026760 RepID=A0A7X6SE71_9BACT) HSP 1 Score: 171 bits (434), Expect = 1.500e-49 Identity = 77/109 (70.64%), Postives = 95/109 (87.16%), Query Frame = 1
Query: 7 QAVVFLDRDDFKSTWLGNKSIYRTRMAIADGGELVVMAPGVTKFGEDPAIDSLIRRFGYRTTPEIMDFLKETLELRNSLSAVAHLIHGSSEGRFTITYCPGGLTREEVE 333
+ VV+LD +FKSTWLGNKSIYRTRMAIAD GEL+V+APG+ +FGEDP ID LIR++GYRTTPE+M F+KE +L+N+LSA AHLIHGSSE RFT+ YCPG ++REE+E
Sbjct: 263 KVVVYLDPQEFKSTWLGNKSIYRTRMAIADDGELIVLAPGLREFGEDPEIDRLIRKYGYRTTPEVMQFVKENSDLQNNLSAAAHLIHGSSENRFTVIYCPGYISREEIE 371
BLAST of mRNA_S-dermatodea_contig8242.16441.1 vs. uniprot
Match: A0A7C4BYA3_9BACT (DUF2088 domain-containing protein n=1 Tax=Bryobacteraceae bacterium TaxID=2212468 RepID=A0A7C4BYA3_9BACT) HSP 1 Score: 171 bits (432), Expect = 3.040e-49 Identity = 78/115 (67.83%), Postives = 95/115 (82.61%), Query Frame = 1
Query: 1 VGQAVVFLDRDDFKSTWLGNKSIYRTRMAIADGGELVVMAPGVTKFGEDPAIDSLIRRFGYRTTPEIMDFLKETLELRNSLSAVAHLIHGSSEGRFTITYCPGGLTREEVEGGEM 345
+ +AVV+LD +FKSTWLGNKS+YRTRMA+ADGGEL+V+APGV +FGEDP ID LIR++GY TP ++ +KE +L +LSA AHLIHGSSEGRFTITYCPGGL+REEVE
Sbjct: 262 IRKAVVYLDPGEFKSTWLGNKSVYRTRMALADGGELIVLAPGVKEFGEDPTIDKLIRKYGYVGTPAVLQAVKENEDLAGNLSAAAHLIHGSSEGRFTITYCPGGLSREEVEAANF 376
BLAST of mRNA_S-dermatodea_contig8242.16441.1 vs. uniprot
Match: A0A836RU81_9BACT (DUF2088 domain-containing protein n=1 Tax=Calditrichaeota bacterium TaxID=2212469 RepID=A0A836RU81_9BACT) HSP 1 Score: 171 bits (432), Expect = 3.040e-49 Identity = 77/112 (68.75%), Postives = 97/112 (86.61%), Query Frame = 1
Query: 1 VGQAVVFLDRDDFKSTWLGNKSIYRTRMAIADGGELVVMAPGVTKFGEDPAIDSLIRRFGYRTTPEIMDFLKETLELRNSLSAVAHLIHGSSEGRFTITYCPGGLTREEVEG 336
+G+ VV+LD ++FKS+WLGNKSIYRTRMAIADGGEL+++AP + +FGED ID LIR++GY TTPEI+ +E +L+N+LSA AHLIHGSSEGRFTITYCPG L+REE+EG
Sbjct: 261 LGKVVVYLDPEEFKSSWLGNKSIYRTRMAIADGGELIILAPALKEFGEDAEIDRLIRKYGYLTTPEILRLTRENADLQNNLSAAAHLIHGSSEGRFTITYCPGRLSREEIEG 372
BLAST of mRNA_S-dermatodea_contig8242.16441.1 vs. uniprot
Match: A0A1G0VMA5_9BACT (D-mannonate epimerase (Fragment) n=1 Tax=Ignavibacteria bacterium RIFOXYA2_FULL_37_17 TaxID=1798443 RepID=A0A1G0VMA5_9BACT) HSP 1 Score: 167 bits (423), Expect = 3.540e-49 Identity = 74/111 (66.67%), Postives = 95/111 (85.59%), Query Frame = 1
Query: 1 VGQAVVFLDRDDFKSTWLGNKSIYRTRMAIADGGELVVMAPGVTKFGEDPAIDSLIRRFGYRTTPEIMDFLKETLELRNSLSAVAHLIHGSSEGRFTITYCPGGLTREEVE 333
+ + +V+LD ++KSTWLGNKS+YRTRMAIADGGEL+V+APG+ +FGED ID LIR++GY TTPE++ F+ E +L+N+LSA AHLIHGSSE RFTITYCPG LT+EE+E
Sbjct: 138 LNKVIVYLDPSEYKSTWLGNKSVYRTRMAIADGGELIVLAPGLKEFGEDKTIDGLIRKYGYVTTPEVLKFVDENEDLKNNLSAAAHLIHGSSENRFTITYCPGYLTKEEIE 248
BLAST of mRNA_S-dermatodea_contig8242.16441.1 vs. uniprot
Match: A0A5C6C9G6_9BACT (Lar_N domain-containing protein n=1 Tax=Bythopirellula polymerisocia TaxID=2528003 RepID=A0A5C6C9G6_9BACT) HSP 1 Score: 170 bits (430), Expect = 5.660e-49 Identity = 77/110 (70.00%), Postives = 94/110 (85.45%), Query Frame = 1
Query: 7 QAVVFLDRDDFKSTWLGNKSIYRTRMAIADGGELVVMAPGVTKFGEDPAIDSLIRRFGYRTTPEIMDFLKETLELRNSLSAVAHLIHGSSEGRFTITYCPGGLTREEVEG 336
+ VV+LD D+F STWLGNK+IYRTRMAIADGGEL+V+AP V FGEDP ID LIR++GYRTTPE++ F++ +LR +LSA AHLIHGSSEGRF +TYCPG L+REE+EG
Sbjct: 263 KVVVYLDPDEFHSTWLGNKAIYRTRMAIADGGELIVLAPSVRTFGEDPQIDLLIRKYGYRTTPEVLKFVEANEDLRENLSAAAHLIHGSSEGRFKVTYCPGELSREEIEG 372
BLAST of mRNA_S-dermatodea_contig8242.16441.1 vs. uniprot
Match: A0A7V9G5U0_9BACT (DUF2088 domain-containing protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7V9G5U0_9BACT) HSP 1 Score: 170 bits (430), Expect = 6.030e-49 Identity = 78/110 (70.91%), Postives = 94/110 (85.45%), Query Frame = 1
Query: 7 QAVVFLDRDDFKSTWLGNKSIYRTRMAIADGGELVVMAPGVTKFGEDPAIDSLIRRFGYRTTPEIMDFLKETLELRNSLSAVAHLIHGSSEGRFTITYCPGGLTREEVEG 336
+ VV+LD ++F +TWLGNKS+YRTRMAIAD GELVV+APG+ FGEDP ID LIR +GYRTTPE+M F++E +LR +LSA AHLIHGSSEGRFT+TYCPG LTR E+EG
Sbjct: 264 KVVVYLDPEEFHTTWLGNKSVYRTRMAIADRGELVVLAPGLKGFGEDPEIDRLIRAYGYRTTPEVMRFVREHQDLRTNLSAAAHLIHGSSEGRFTVTYCPGHLTRAEIEG 373 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig8242.16441.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig8242.16441.1 >prot_S-dermatodea_contig8242.16441.1 ID=prot_S-dermatodea_contig8242.16441.1|Name=mRNA_S-dermatodea_contig8242.16441.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=117bp VGQAVVFLDRDDFKSTWLGNKSIYRTRMAIADGGELVVMAPGVTKFGEDPback to top mRNA from alignment at S-dermatodea_contig8242:2451..3372+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig8242.16441.1 ID=mRNA_S-dermatodea_contig8242.16441.1|Name=mRNA_S-dermatodea_contig8242.16441.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=922bp|location=Sequence derived from alignment at S-dermatodea_contig8242:2451..3372+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig8242:2451..3372+ >mRNA_S-dermatodea_contig8242.16441.1 ID=mRNA_S-dermatodea_contig8242.16441.1|Name=mRNA_S-dermatodea_contig8242.16441.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=702bp|location=Sequence derived from alignment at S-dermatodea_contig8242:2451..3372+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |