prot_S-dermatodea_contig8238.16429.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig8238.16429.1
Unique Nameprot_S-dermatodea_contig8238.16429.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length223
Homology
BLAST of mRNA_S-dermatodea_contig8238.16429.1 vs. uniprot
Match: A0A6H5L6M3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6M3_9PHAE)

HSP 1 Score: 284 bits (727), Expect = 1.600e-88
Identity = 165/233 (70.82%), Postives = 174/233 (74.68%), Query Frame = 0
Query:   11 IATTTLLVFVRCCRGY-YVSP-CMLPASSTL--------------LRRCSTSSPSFLQGRSPTRSLSTSLSAAR---APMVGPAPPPAAPTAPLFDADGNELSKPTKRKVAIVVGYVGTAFHGWQQSTD-HGVRTVEGELETALWKAGAIADSNYGDLTKIGWGRTSRTDKGVHASKTVAAAKLLLPQETFTESGMSQYGKDKLNEHLPDDIRCFSVSKVPKSFRGRDECTLR 223
            IA  TLLV     RGY YV+P CML   S                L RCS+ S          +   TSL+  R   APM+GP  PPA P   L+DADGNELSKPTKRKVAIVVGYVGTAFHGWQQSTD   VRTVEGELETALWKAGAIADSNYGDL KIGWGRTSRTDKGVHASKTVAAAKLLLPQETFT +GMSQYGKDKLNE+LPDDIRCFSVSKVPKSFRGR+ECTLR
Sbjct:   11 IAIKTLLVGRCFVRGYAYVAPSCMLSRFSQQRHRQLQSAGLSILPLNRCSSGS----------KRGGTSLTGVRKPRAPMIGPELPPAPPPPTLYDADGNELSKPTKRKVAIVVGYVGTAFHGWQQSTDAQNVRTVEGELETALWKAGAIADSNYGDLNKIGWGRTSRTDKGVHASKTVAAAKLLLPQETFTAAGMSQYGKDKLNENLPDDIRCFSVSKVPKSFRGREECTLR 233          
BLAST of mRNA_S-dermatodea_contig8238.16429.1 vs. uniprot
Match: D8LDS4_ECTSI (Pseudouridylate synthase, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDS4_ECTSI)

HSP 1 Score: 277 bits (708), Expect = 2.030e-85
Identity = 138/154 (89.61%), Postives = 142/154 (92.21%), Query Frame = 0
Query:   71 MVGPAPPPAAPTAPLFDADGNELSKPTKRKVAIVVGYVGTAFHGWQQSTD-HGVRTVEGELETALWKAGAIADSNYGDLTKIGWGRTSRTDKGVHASKTVAAAKLLLPQETFTESGMSQYGKDKLNEHLPDDIRCFSVSKVPKSFRGRDECTLR 223
            M+GP  PPA P   L+DADGNELSKPTKRKVAIVVGYVGTAFHGWQQSTD   VRTVEGELETALWKAGAIADSNYGDL KIGWGRTSRTDKGVHASKTVAAAKLLLPQETFT +GMSQYGKDKLNE LPDDIRCFSVSKVPKSFRGR+ECTLR
Sbjct:    1 MIGPELPPAPPPPTLYDADGNELSKPTKRKVAIVVGYVGTAFHGWQQSTDAQNVRTVEGELETALWKAGAIADSNYGDLNKIGWGRTSRTDKGVHASKTVAAAKLLLPQETFTATGMSQYGKDKLNEKLPDDIRCFSVSKVPKSFRGREECTLR 154          
BLAST of mRNA_S-dermatodea_contig8238.16429.1 vs. uniprot
Match: A0A835YLA7_9STRA (Pseudouridine synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLA7_9STRA)

HSP 1 Score: 151 bits (381), Expect = 8.630e-39
Identity = 81/148 (54.73%), Postives = 96/148 (64.86%), Query Frame = 0
Query:   90 GNELSKPTKRKVAIVVGYVGTAFHGWQQSTDHGVRTVEGELETALWKAGAIADSNYGDLTKIGWGRTSR--------------TDKGVHASKTVAAAKLLLPQETFTESGMSQYGKDKLNEHLPDDIRCFSVSKVPKSFRGRDECTLR 223
            G E     KRKVA+V+GYVGT F G Q   + GVRTVE E+ETAL+ AG I +SNYGDL+KIGW RTSR              TDKGVHA+KTV  AKLL+ Q  F  +G++   K  +N  LP D+R FSV KVPK FRGR EC+ R
Sbjct:    7 GEEKGGVAKRKVALVLGYVGTDFSGLQIDRNSGVRTVESEMETALFNAGVIKESNYGDLSKIGWSRTSRIPLDGFVNIAYASRTDKGVHAAKTVVVAKLLVDQTQFCAAGLNAPLKAAINACLPPDLRVFSVCKVPKGFRGRGECSWR 154          
BLAST of mRNA_S-dermatodea_contig8238.16429.1 vs. uniprot
Match: A0A6A5AFW9_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5AFW9_9STRA)

HSP 1 Score: 130 bits (327), Expect = 1.220e-34
Identity = 68/135 (50.37%), Postives = 89/135 (65.93%), Query Frame = 0
Query:   91 NELSKPTKRKVAIVVGYVGTAFHGWQ-QSTDHGVRTVEGELETALWKAGAIADSNYGDLTKIGWGRTSRTDKGVHASKTVAAAKLLLPQETFT-ESGMSQYGKDKLNEHLPDDIRCFSVSKVPKSFRGRDECTLR 223
            +E  K  K KVA+V GY GT +HG Q Q     V T+E E+  AL+KAG I +SNYGD++KIGW R+SRTDKGVHAS  V + KLL+  +     SG   +   ++N HLP DIR F+ +KV +SFR R++C LR
Sbjct:   31 DEPGKKRKVKVALVTGYTGTGYHGVQIQENAVDVPTIEHEVRAALFKAGCILESNYGDMSKIGWSRSSRTDKGVHASSIVLSGKLLVQDDRIDPRSGRIAHLPAEINAHLPADIRVFTATKVHQSFRAREDCILR 165          
BLAST of mRNA_S-dermatodea_contig8238.16429.1 vs. uniprot
Match: A0A1V9Y8S5_9STRA (Ubiquitin fusion degradation protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Y8S5_9STRA)

HSP 1 Score: 134 bits (338), Expect = 3.080e-33
Identity = 68/131 (51.91%), Postives = 90/131 (68.70%), Query Frame = 0
Query:   94 SKPTKRKVAIVVGYVGTAFHGWQQSTDHGVRTVEGELETALWKAGAIADSNYGDLTKIGWGRTSRTDKGVHASKTVAAAKLLLPQETFTESGMSQYG-KDKLNEHLPDDIRCFSVSKVPKSFRGRDECTLR 223
            +K  K K A+V GY+GT FHG Q    + V T+E EL  AL+ AG I++SNY D+ KIGW R+SRTDKGVHAS  V +AKLL+ +++  ES     G  + LN+HLPD IR F+ +KV +SFR R++C LR
Sbjct:   18 AKKRKVKAALVSGYLGTGFHGVQLQEHNNVPTIEQELRNALFAAGCISESNYADMAKIGWSRSSRTDKGVHASCIVFSAKLLVDEDSIDESTGRLIGLPEALNKHLPDTIRMFTATKVHRSFRAREDCLLR 148          
BLAST of mRNA_S-dermatodea_contig8238.16429.1 vs. uniprot
Match: A0A067C0B2_SAPPC (PseudoU_synth_1 domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067C0B2_SAPPC)

HSP 1 Score: 133 bits (335), Expect = 8.440e-33
Identity = 68/131 (51.91%), Postives = 90/131 (68.70%), Query Frame = 0
Query:   94 SKPTKRKVAIVVGYVGTAFHGWQQSTDHGVRTVEGELETALWKAGAIADSNYGDLTKIGWGRTSRTDKGVHASKTVAAAKLLLPQETFTESGMSQYG-KDKLNEHLPDDIRCFSVSKVPKSFRGRDECTLR 223
            +K  K KVA+V GY+GT +HG Q    +GV TVE E+  AL+KAG I +SN  DL+KIGW R+SRTDKGVHAS  V +AKLL+  ++  E+     G  + +N HLP  IR F+ +KV +SFR R++CTLR
Sbjct:   19 AKKRKVKVALVSGYLGTGYHGVQLQDTNGVPTVENEVRAALFKAGCILESNLADLSKIGWSRSSRTDKGVHASCIVFSAKLLVDSDSINETDGRLRGLPEAINAHLPPSIRMFTATKVHQSFRAREDCTLR 149          
BLAST of mRNA_S-dermatodea_contig8238.16429.1 vs. uniprot
Match: A0A6G0WDH2_9STRA (PseudoU_synth_1 domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WDH2_9STRA)

HSP 1 Score: 132 bits (333), Expect = 1.880e-32
Identity = 66/136 (48.53%), Postives = 94/136 (69.12%), Query Frame = 0
Query:   91 NELSKPTKRKVAI--VVGYVGTAFHGWQQSTDHGVRTVEGELETALWKAGAIADSNYGDLTKIGWGRTSRTDKGVHASKTVAAAKLLLPQETFTE-SGMSQYGKDKLNEHLPDDIRCFSVSKVPKSFRGRDECTLR 223
            NE  +  KRKV +  V+GY GT +HG Q    + V T+E E+ +AL+KAG I +SNYGD++KIGW R+SRTDKGVHA+  V +AKLL+ +E   + +G      + +N HLP++IR F+ +KV +SFR R+EC +R
Sbjct:   27 NEFKEDKKRKVKVGLVMGYTGTGYHGVQIQEKNDVPTIEHEVRSALFKAGCILESNYGDMSKIGWSRSSRTDKGVHATSIVVSAKLLVHEERIDKKTGRIAQLVEDINVHLPENIRVFTATKVHQSFRAREECIMR 162          
BLAST of mRNA_S-dermatodea_contig8238.16429.1 vs. uniprot
Match: A0A024U417_9STRA (tRNA pseudouridine(38-40) synthase n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U417_9STRA)

HSP 1 Score: 130 bits (326), Expect = 1.900e-31
Identity = 67/133 (50.38%), Postives = 87/133 (65.41%), Query Frame = 0
Query:   92 ELSKPTKRKVAIVVGYVGTAFHGWQQSTDHGVRTVEGELETALWKAGAIADSNYGDLTKIGWGRTSRTDKGVHASKTVAAAKLLLPQETFTE-SGMSQYGKDKLNEHLPDDIRCFSVSKVPKSFRGRDECTLR 223
            E  K  K KVA+V GY GT +HG Q   +  V TVE  +  AL+KAG I +SNYGD++KIGW R+SRTDKGVHAS  V + KLL+        SG   +  D++N +LP DIR F+ +KV +SFR R++C LR
Sbjct:   31 ESGKKRKVKVALVTGYTGTGYHGVQIQENVNVPTVEHAVREALFKAGCILESNYGDMSKIGWSRSSRTDKGVHASSIVLSGKLLVHGNRIDPVSGRIAHLPDQINAYLPQDIRVFTATKVHQSFRAREDCILR 163          
BLAST of mRNA_S-dermatodea_contig8238.16429.1 vs. uniprot
Match: A0A485KC76_9STRA (Aste57867_2617 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KC76_9STRA)

HSP 1 Score: 129 bits (324), Expect = 2.780e-31
Identity = 64/131 (48.85%), Postives = 89/131 (67.94%), Query Frame = 0
Query:   94 SKPTKRKVAIVVGYVGTAFHGWQQSTDHGVRTVEGELETALWKAGAIADSNYGDLTKIGWGRTSRTDKGVHASKTVAAAKLLLPQETFTE-SGMSQYGKDKLNEHLPDDIRCFSVSKVPKSFRGRDECTLR 223
            +K  K KV +V GY GT +HG Q   +  V T+E ++  AL+KAG I +SNY D++KIGW R+SRTDKGVHA+  V +AKLL+ ++     +G   +  D++N HLPD +R FS +KV +SFR R+EC LR
Sbjct:   20 AKKRKVKVGLVTGYTGTGYHGVQIQENGDVPTIEYDVREALFKAGCILESNYADMSKIGWSRSSRTDKGVHATAIVLSAKLLVHEDRIDPVTGRIAHLVDEVNAHLPDAVRVFSATKVHQSFRAREECILR 150          
BLAST of mRNA_S-dermatodea_contig8238.16429.1 vs. uniprot
Match: A0A1V9Z3D6_9STRA (Ubiquitin fusion degradation protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z3D6_9STRA)

HSP 1 Score: 130 bits (328), Expect = 2.890e-31
Identity = 66/131 (50.38%), Postives = 90/131 (68.70%), Query Frame = 0
Query:   94 SKPTKRKVAIVVGYVGTAFHGWQQSTDHGVRTVEGELETALWKAGAIADSNYGDLTKIGWGRTSRTDKGVHASKTVAAAKLLLPQETFTES-GMSQYGKDKLNEHLPDDIRCFSVSKVPKSFRGRDECTLR 223
            +K  K KVA+V GY+GT FHG Q    +GV TVE  L +AL+KAG I DSN+ D+ KIGW R+SRTDKGVHAS  V + KLL+  ++  E+ G  +   + +N HLP+ +R F+ +KV +SFR R++C LR
Sbjct: 1118 AKKRKVKVALVSGYLGTGFHGVQLQDRNGVPTVEDTLRSALFKAGCIRDSNFDDMNKIGWSRSSRTDKGVHASIIVFSGKLLVDDDSIDEATGRLRGLPETINAHLPETVRIFTATKVHQSFRAREDCLLR 1248          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig8238.16429.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L6M3_9PHAE1.600e-8870.82Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LDS4_ECTSI2.030e-8589.61Pseudouridylate synthase, putative n=1 Tax=Ectocar... [more]
A0A835YLA7_9STRA8.630e-3954.73Pseudouridine synthase n=1 Tax=Tribonema minus Tax... [more]
A0A6A5AFW9_9STRA1.220e-3450.37Uncharacterized protein (Fragment) n=1 Tax=Aphanom... [more]
A0A1V9Y8S5_9STRA3.080e-3351.91Ubiquitin fusion degradation protein n=1 Tax=Thrau... [more]
A0A067C0B2_SAPPC8.440e-3351.91PseudoU_synth_1 domain-containing protein n=2 Tax=... [more]
A0A6G0WDH2_9STRA1.880e-3248.53PseudoU_synth_1 domain-containing protein n=1 Tax=... [more]
A0A024U417_9STRA1.900e-3150.38tRNA pseudouridine(38-40) synthase n=1 Tax=Aphanom... [more]
A0A485KC76_9STRA2.780e-3148.85Aste57867_2617 protein n=1 Tax=Aphanomyces stellat... [more]
A0A1V9Z3D6_9STRA2.890e-3150.38Ubiquitin fusion degradation protein n=1 Tax=Achly... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.70.580coord: 88..220
e-value: 4.2E-37
score: 128.6
NoneNo IPR availablePANTHERPTHR11142:SF9TRNA PSEUDOURIDINE SYNTHASE-RELATEDcoord: 97..223
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 26..223
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 9..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..25
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 21..25
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..8
IPR001406Pseudouridine synthase I, TruAPANTHERPTHR11142PSEUDOURIDYLATE SYNTHASEcoord: 97..223
IPR020103Pseudouridine synthase, catalytic domain superfamilySUPERFAMILY55120Pseudouridine synthasecoord: 98..223

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig8238contigS-dermatodea_contig8238:163..1928 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig8238.16429.1mRNA_S-dermatodea_contig8238.16429.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig8238 163..1928 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig8238.16429.1 ID=prot_S-dermatodea_contig8238.16429.1|Name=mRNA_S-dermatodea_contig8238.16429.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=223bp
MLVDRRPYCLIATTTLLVFVRCCRGYYVSPCMLPASSTLLRRCSTSSPSF
LQGRSPTRSLSTSLSAARAPMVGPAPPPAAPTAPLFDADGNELSKPTKRK
VAIVVGYVGTAFHGWQQSTDHGVRTVEGELETALWKAGAIADSNYGDLTK
IGWGRTSRTDKGVHASKTVAAAKLLLPQETFTESGMSQYGKDKLNEHLPD
DIRCFSVSKVPKSFRGRDECTLR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001406PsdUridine_synth_TruA
IPR020103PsdUridine_synth_cat_dom_sf