prot_S-dermatodea_contig8227.16421.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig8227.16421.1
Unique Nameprot_S-dermatodea_contig8227.16421.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length125
Homology
[Close]
BLAST of mRNA_S-dermatodea_contig8227.16421.1 vs. uniprot
Match: D7FT58_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT58_ECTSI)

HSP 1 Score: 139 bits (349), Expect = 5.300e-36
Identity = 72/118 (61.02%), Postives = 88/118 (74.58%), Query Frame = 0 
Query:    1 GLVVFADKAGYDKAMVEIFRIFGVNIKGVSVTTHPAEACRTVYVENTGMRTGLNLVGKINEVLQPHYEVMLKSYFLDDDMPQQAVAIPLRSYSAVRGVEARLREHGFYTAYHYIVPKV 118
            GLVVF+D  G+D+A  E FRIFGV+I+G +V T PA  CRT++VEN  MRTGL +V  INEVLQP Y+V L S  L++++PQ  VAIPLR Y AVR V+  L + GF TAYHYIVPKV
Sbjct:  422 GLVVFSDHDGFDRATAESFRIFGVHIEGAAVATSPAYQCRTLFVENLEMRTGLEMVEAINEVLQPRYKVGLASQSLENNVPQ-VVAIPLRKYVAVRAVDKILTDAGFITAYHYIVPKV 538
[Close]
BLAST of mRNA_S-dermatodea_contig8227.16421.1 vs. uniprot
Match: A0A6H5KR02_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR02_9PHAE)

HSP 1 Score: 136 bits (343), Expect = 8.040e-35
Identity = 71/118 (60.17%), Postives = 87/118 (73.73%), Query Frame = 0 
Query:    1 GLVVFADKAGYDKAMVEIFRIFGVNIKGVSVTTHPAEACRTVYVENTGMRTGLNLVGKINEVLQPHYEVMLKSYFLDDDMPQQAVAIPLRSYSAVRGVEARLREHGFYTAYHYIVPKV 118
            GLVVF+D  G+D+A  E FRIFGV+IKG +V T PA  CRT++VEN  MRTGL +V  INEVLQP Y+V L S  L++++PQ  VAIPLR Y AVR V+  L + GF TAYHYI P+V
Sbjct:  785 GLVVFSDHEGFDRATGESFRIFGVHIKGAAVATSPAHQCRTLFVENLEMRTGLEMVEAINEVLQPRYKVGLASQSLENNVPQ-VVAIPLRKYVAVRAVDKILTDAGFITAYHYIKPQV 901
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig8227.16421.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FT58_ECTSI5.300e-3661.02Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KR02_9PHAE8.040e-3560.17Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig8227contigS-dermatodea_contig8227:6727..9209 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig8227.16421.1mRNA_S-dermatodea_contig8227.16421.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig8227 6727..9209 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig8227.16421.1 ID=prot_S-dermatodea_contig8227.16421.1|Name=mRNA_S-dermatodea_contig8227.16421.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=125bp
GLVVFADKAGYDKAMVEIFRIFGVNIKGVSVTTHPAEACRTVYVENTGMR
TGLNLVGKINEVLQPHYEVMLKSYFLDDDMPQQAVAIPLRSYSAVRGVEA
RLREHGFYTAYHYIVPKVSLVLAK*
back to top