prot_S-dermatodea_contig8225.16420.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_S-dermatodea_contig8225.16420.1
Unique Name	prot_S-dermatodea_contig8225.16420.1
Type	polypeptide
Organism	Saccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length	244

Homology

[Close]

BLAST of mRNA_S-dermatodea_contig8225.16420.1 vs. uniprot
Match: D7FYF0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYF0_ECTSI)

HSP 1 Score: 172 bits (436), Expect = 2.070e-45
Identity = 115/186 (61.83%), Postives = 136/186 (73.12%), Query Frame = 0

Query:    8 AAAGKRVSELEKSLLEVGRAAVVERVEAEAAAMEASRRLEAVSGG------FLVAALESALEKLAETGSAAEGLSKEQLEVTRELSMERDDLLEENERSAARLDQLTAALREQRQEKADLHAQVLDRERELEALRAQGDVERVKVARLKSEAEKAQGVCRDLADRLLELQATQEELRRTRQTLTEA 187
            A A +R +ELE +L          R  A AAA+EA   L+    G      F+V ALE+ALEKLAE GS AE LSKEQLE+TR+LS ERD+L+EENERS+ RLDQLT AL+EQR+EK  L  Q+LDRER LEALRAQGDVERVK ARL+ E  KAQ VCR+++DRLLELQATQ+ELR TRQ L +A
Sbjct: 1317 AKAERRAAELEAALAXXXXXXXXVRAXARAAALEAEDTLKTAGKGGDRGAFFVVEALEAALEKLAEAGSEAEALSKEQLEITRQLSAERDELVEENERSSTRLDQLTTALQEQREEKGRLTNQLLDRERGLEALRAQGDVERVKAARLQEEVGKAQEVCREMSDRLLELQATQDELRDTRQGLDQA 1502

[Close]

BLAST of mRNA_S-dermatodea_contig8225.16420.1 vs. uniprot
Match: A0A6H5KA79_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KA79_9PHAE)

HSP 1 Score: 163 bits (412), Expect = 3.400e-42
Identity = 109/175 (62.29%), Postives = 128/175 (73.14%), Query Frame = 0

Query:   65 LAETGSAAEGLSKEQLEVTRELSMERDDLLEENERSAARLDQLTAALREQRQEKADLHAQVLDRERELEALRAQGDVERVKVARLKSEAEKAQGVCRDLADRLLELQATQEELRRTRQTLTEASQELETLRQSKNYLGGVLEEARNLRRGLGNAKSYGVEASARAEAAEALAEEE 239
            LAE GS AE LSKEQLE+TR+LS ERD+L+EENER + RLDQLT AL+EQR+EK  L  Q+LDRER LEALRAQ DVERVK ARL+ E  KAQ VCR+++ RLLELQATQ+ELR TRQ L +AS++LETLR+SK+ L G  +EA                   RA AAE LAEEE
Sbjct: 1463 LAEAGSEAEALSKEQLEITRQLSAERDELVEENERLSTRLDQLTTALQEQREEKGRLTNQLLDRERGLEALRAQSDVERVKAARLQEEVGKAQEVCREMSGRLLELQATQDELRDTRQGLDQASKDLETLRRSKDNLAGGWDEAAXXXXXXXXXXXXXXXXXXRANAAEPLAEEE 1637

The following BLAST results are available for this feature:

BLAST of mRNA_S-dermatodea_contig8225.16420.1 vs. uniprot

BLAST of mRNA_S-dermatodea_contig8225.16420.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D7FYF0_ECTSI	2.070e-45	61.83	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5KA79_9PHAE	3.400e-42	62.29	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 90..138
None	No IPR available	COILS	Coil	Coil	coord: 146..197
None	No IPR available	COILS	Coil	Coil	coord: 224..244

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
S-dermatodea_contig8225	contig	S-dermatodea_contig8225:1644..8770 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_S-dermatodea_contig8225.16420.1	mRNA_S-dermatodea_contig8225.16420.1	Saccorhiza dermatodea SderLu1190fm monoicous	mRNA	S-dermatodea_contig8225 1644..8770 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_S-dermatodea_contig8225.16420.1 ID=prot_S-dermatodea_contig8225.16420.1|Name=mRNA_S-dermatodea_contig8225.16420.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=244bp
MEHAVAAAAAGKRVSELEKSLLEVGRAAVVERVEAEAAAMEASRRLEAVS
GGFLVAALESALEKLAETGSAAEGLSKEQLEVTRELSMERDDLLEENERS
AARLDQLTAALREQRQEKADLHAQVLDRERELEALRAQGDVERVKVARLK
SEAEKAQGVCRDLADRLLELQATQEELRRTRQTLTEASQELETLRQSKNY
LGGVLEEARNLRRGLGNAKSYGVEASARAEAAEALAEEERSEER