prot_S-dermatodea_contig8216.16413.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig8216.16413.1
Unique Nameprot_S-dermatodea_contig8216.16413.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length378
Homology
BLAST of mRNA_S-dermatodea_contig8216.16413.1 vs. uniprot
Match: A0A6H5JJV6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJV6_9PHAE)

HSP 1 Score: 179 bits (455), Expect = 3.180e-49
Identity = 117/308 (37.99%), Postives = 161/308 (52.27%), Query Frame = 0
Query:    7 SKEDGQDRALHALQVAAVSGFTEDNKNIETSCLLLCNACRNGVPVPNLKIRGNVPSSLLAELHPGTSRLESQAT---SRVLPHRRVLKVEW-------------RVPRGGRSTLDFDPFRHDEQRREERHHVFNINMTEVKWPEGTVEIALLRFYGSIEGIAWPASLVRLAFCILDDADYCFYLE---RFNQPLDGVTFPAGLRELFLGVSXXXXXXXXXXXXXXXKLSMPGFNQSMQNVHWPVRLKTLELLDPLNIYLREERPATPYGPRN----FNQPLDATLPSTLETLWLSDDFNQPVDGVVWP 291
            S+E  +DRAL  LQVA VSGF +D ++++ SCL LCNACR GVPV  + +R  VP  LLA + P   + + +A    +RVL  RRVL++EW             +VP+    T                  V +++  EV+WPEGT EI+L+ F   +EG+AWP  L  L+FC L      +++     FN+ L G  FPAGLRE+FLG +               +LS+PG N            K+LE   PL I LRE+ P T     +    F+ P   TLP++LETLWL D+F Q ++ V WP
Sbjct:   11 SEEHMRDRALRGLQVAVVSGFMKDCRSVQESCLGLCNACREGVPVERMLVREWVPQILLAMVLPNAVQAQREAEIPPTRVLHPRRVLRLEWTFRSHAWWAESTGQVPKPSAGTPS----------------VGDVDFNEVQWPEGTREISLILFDKPVEGMAWPLGLECLSFCALRSGCGAWHVSDRGSFNRSLVGANFPAGLREIFLGDAFDQPIEDVVWPQGLERLSLPGCNXXXXXXXXXXXXKSLEFTSPLQICLRED-PNTRLDELDLVGVFDSPF-TTLPASLETLWLGDEFGQSLESVNWP 300          
BLAST of mRNA_S-dermatodea_contig8216.16413.1 vs. uniprot
Match: A0A6H5JNP2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNP2_9PHAE)

HSP 1 Score: 158 bits (399), Expect = 5.870e-41
Identity = 116/305 (38.03%), Postives = 158/305 (51.80%), Query Frame = 0
Query:    1 MEEPPVSKEDGQDRALHALQVAAVSGFTEDNKNIETSCLLLCNACRNGVPVPNLKIRGNVPSSLLAELHPGTSRLESQAT---SRVLPHRRVLKVEWRVPRGGRSTLDFDPFRHDEQRREERHHVFNI-NMTEVKWPEGTVEIALLRFYGSIEGIAWPASLVRLAFCILD-DADYCFYLER--FNQPLDGVTFPAGLRELFLGVSXXXXXXXXXXXXXXXKLSMPGFNQSMQNVHWPVRLKTLELLDPLNIYLREERPAT------PYGPRNFNQPLDATLPSTLETLWLSDDFNQPVDGVVWPT 292
            +EE P  +E  +DRAL ALQ A VSGF +D +  + SCL LCNACR GVPV  + I   VP + LA + P   + + +A    +RVL  RRVL+++W      R++  +     D      R     I +  EV+WPEG  E+ LL F   +EG+AWP  L  L+FC L        +  R  FN+ L G  FP+GLRE+FLG +               +LS+PG N            K+LE   P  I LRE+ P T      P+  R FN P    LP++LE LWL ++F Q ++GV WP+
Sbjct:    6 VEECP-GEEHMRDRALRALQFAVVSGFVKDYRATQASCLGLCNACREGVPVERMLIAEGVPQTRLAMVLPKVVQAQWEADIPPTRVLQPRRVLRLKWTF----RTSAWWTETTEDIPNSWVRALTMGIVDFDEVQWPEGIKEVNLLSFDKEVEGVAWPKGLECLSFCALRLRCGPSGFANRGSFNRSLVGANFPSGLREIFLGDAFDQPIEDVVWPQGLERLSLPGCNXXXXXXXXXXXXKSLEFSPPSQICLRED-PNTRLDVLEPHRDR-FNSPF-TKLPASLEALWLGNNFCQSLEGVNWPS 302          
BLAST of mRNA_S-dermatodea_contig8216.16413.1 vs. uniprot
Match: A0A6H5JK73_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK73_9PHAE)

HSP 1 Score: 87.0 bits (214), Expect = 1.450e-15
Identity = 63/183 (34.43%), Postives = 88/183 (48.09%), Query Frame = 0
Query:  122 VFNINMTEVKWPEGTVEIALLRFYGSIEGIAWPASLVRLAFCILDDADYCFYLE---RFNQPLDGV--TFPAGLRELFLGVSXXXXXXXXXXXXXXXKLSMPGFNQSMQ--------NVHWPVRLKTLELLDPLNIYLREERPATPYGPRNFNQPLDATLPSTLETLWLSDDFNQPVDGVVWP 291
            V N+++ +V WPEGT E+AL+ F  + EG  WP SL RL+F         + ++    F   L G   +FP+GLR++FLG +               +LS+P F             N  W +RL      DP N  L E      Y  R FN P    LP++LETLWL D F+  ++G+ WP
Sbjct:   38 VSNVDLRDVHWPEGTKEVALILFDKAFEGATWPVSLERLSFYAFRSGGQSYRVKDIGSFKLSLVGANFSFPSGLRDIFLGAAFDQPIQDVVWPQGLQRLSVPRFXXXXXXXXXXPALNPPWEIRLTE----DP-NTRLDE---LGSYWDR-FNCPF-THLPASLETLWLGDKFDHSLEGINWP 210          
BLAST of mRNA_S-dermatodea_contig8216.16413.1 vs. uniprot
Match: D8LI75_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI75_ECTSI)

HSP 1 Score: 67.0 bits (162), Expect = 2.950e-9
Identity = 59/184 (32.07%), Postives = 78/184 (42.39%), Query Frame = 0
Query:  177 FNQPLDGVTFPAGLRELFLGVSXXXXXXXXXXXXXXXKLSMPGFNQSMQNVHWPVRLKTLELLDPLNIYLREERPATPYG-----PRNFNQPL--DATLPSTLETLWLSDDFNQPVDGVVWPTNLVEVNFGCKFRCQSLSGTVWPSTLRVLLVCHDFPDGYGELPEDCKV---IN-RSNDHHWS 349
            FNQP+D V +P GL                       ++S+PG              K+LE L P  I LRE+   T           FNQ L  ++ LP +LE LWLSD   +P DGVVWP  LV +  G  F   +     WP TLR L +  +       +P  C+V   +N   ND  W+
Sbjct:    3 FNQPIDRVAWPDGLE----------------------RMSLPGXXXXXXXXXXXXXXKSLEFLPPGEILLREDPEITLERLNFTTESGFNQSLGENSGLPVSLERLWLSDA-TRPQDGVVWPRGLVTLGLGDSFP-NTAPRFEWPPTLRRLYLVDELSSAR-RVPRGCEVKVLMNCELNDPEWN 161          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig8216.16413.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5JJV6_9PHAE3.180e-4937.99Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JNP2_9PHAE5.870e-4138.03Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JK73_9PHAE1.450e-1534.43Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LI75_ECTSI2.950e-932.07Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 352..372
NoneNo IPR availablePANTHERPTHR32134:SF134FNIP REPEAT-CONTAINING PROTEIN DDB_G0274063/DDB_G0272642coord: 184..306
coord: 144..220
NoneNo IPR availablePANTHERPTHR32134UNCHARACTERIZEDcoord: 184..306
coord: 144..220
IPR008615FNIPPFAMPF05725FNIPcoord: 260..302
e-value: 2.1E-6
score: 27.8
coord: 177..218
e-value: 2.6E-7
score: 30.7

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig8216contigS-dermatodea_contig8216:4705..5838 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig8216.16413.1mRNA_S-dermatodea_contig8216.16413.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig8216 1082..7408 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig8216.16413.1 ID=prot_S-dermatodea_contig8216.16413.1|Name=mRNA_S-dermatodea_contig8216.16413.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=378bp
MEEPPVSKEDGQDRALHALQVAAVSGFTEDNKNIETSCLLLCNACRNGVP
VPNLKIRGNVPSSLLAELHPGTSRLESQATSRVLPHRRVLKVEWRVPRGG
RSTLDFDPFRHDEQRREERHHVFNINMTEVKWPEGTVEIALLRFYGSIEG
IAWPASLVRLAFCILDDADYCFYLERFNQPLDGVTFPAGLRELFLGVSFN
QPIDNVIFPEGLEKLSMPGFNQSMQNVHWPVRLKTLELLDPLNIYLREER
PATPYGPRNFNQPLDATLPSTLETLWLSDDFNQPVDGVVWPTNLVEVNFG
CKFRCQSLSGTVWPSTLRVLLVCHDFPDGYGELPEDCKVINRSNDHHWSD
IEDDEDEEEEEYMIEVDEFEDEYDRDY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008615FNIP