prot_S-dermatodea_contig82143.16412.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig82143.16412.1
Unique Nameprot_S-dermatodea_contig82143.16412.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length134
Homology
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BLAST of mRNA_S-dermatodea_contig82143.16412.1 vs. uniprot
Match: A0A6H5K1Z1_9PHAE (DHHA2 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K1Z1_9PHAE)

HSP 1 Score: 111 bits (277), Expect = 6.990e-26
Identity = 68/141 (48.23%), Postives = 87/141 (61.70%), Query Frame = 0 
Query:    1 MSSVLCRVDTLAEK---PEAAEAVRAFALERGIDALIVMTTTLDADDNMRKELLVFADSERRCEQMGAFLEGPPGEFLRLQRQQQGQEKEPRPG------GGGFFGGSACSSGRFLRWELGNVAPSRKQVAPSLFSFYESV 132
            MSS LCR++TLAEK       +A+R FA+ +G+D+L VMT+TLD + NM+KELL+F  ++ R +QM  +LEG  GEFL L       E    PG      G    G    + G FLRW+L NV  SRKQVAP + SFYESV
Sbjct:  441 MSSTLCRLETLAEKGGYEGFGDAMRTFAVSQGVDSLAVMTSTLDEEGNMQKELLIFTHTKLRGDQMREYLEGAHGEFLEL-------EAATPPGTDFGGRGDEVEGSEEGARGWFLRWDLRNVRASRKQVAPVIASFYESV 574
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig82143.16412.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5K1Z1_9PHAE6.990e-2648.23DHHA2 domain-containing protein n=2 Tax=Ectocarpus... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038222DHHA2 domain superfamilyGENE3D3.10.310.20coord: 1..132
e-value: 2.4E-10
score: 42.5
IPR004097DHHA2 domainPFAMPF02833DHHA2coord: 2..125
e-value: 2.3E-12
score: 47.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig82143contigS-dermatodea_contig82143:211..612 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig82143.16412.1mRNA_S-dermatodea_contig82143.16412.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig82143 187..612 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig82143.16412.1 ID=prot_S-dermatodea_contig82143.16412.1|Name=mRNA_S-dermatodea_contig82143.16412.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=134bp
MSSVLCRVDTLAEKPEAAEAVRAFALERGIDALIVMTTTLDADDNMRKEL
LVFADSERRCEQMGAFLEGPPGEFLRLQRQQQGQEKEPRPGGGGFFGGSA
CSSGRFLRWELGNVAPSRKQVAPSLFSFYESVV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR038222DHHA2_dom_sf
IPR004097DHHA2