prot_S-dermatodea_contig8206.16399.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig8206.16399.1
Unique Nameprot_S-dermatodea_contig8206.16399.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length366
Homology
BLAST of mRNA_S-dermatodea_contig8206.16399.1 vs. uniprot
Match: D7FR72_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR72_ECTSI)

HSP 1 Score: 264 bits (674), Expect = 1.010e-79
Identity = 197/316 (62.34%), Postives = 216/316 (68.35%), Query Frame = 0
Query:   51 LVLLEELPGVYGEEKKARLRRLMTECARSGPCPVILSWSQASESSSYQSELEQILSRETLRMPGVQITTCNPINATLLRQHLRGVLALEGVSDPRGALVEGAVATCAVQYPFSSSLPXXXXXXXXXXXXTGDIRHALLNLQMSVGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRDTFLSQFHALGKLLYAKRLPTGVDGVGVATXXXXXXXXXXXXXXXXXXXXXRGALGFVPEEVLSRGGMDLDWALAFLQFHCVDFFTDEN 366
            +VL+EELP VYGEEKKARLR LM ECARS P PVI+ WSQASES+SYQS LEQ+LSRETLRMPGVQITTCNPINATLLRQHL+GVLALEGVSDP+G LV+ A+ TCA      +S              TGDIRHALLNLQMSVGG                           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                   +RDTFL+QFHALGKLLYAKR+P   DG G                XXXXXX  RG L FVPE+VLS+GGM+LDWALAFLQ+HCVDF+TDE+
Sbjct:   55 VVLIEELPEVYGEEKKARLRSLMAECARSSPSPVIICWSQASESASYQSRLEQVLSRETLRMPGVQITTCNPINATLLRQHLKGVLALEGVSDPKGTLVQSAITTCAGLCRDRASC------RTLLSGPTGDIRHALLNLQMSVGGRGGSGSTAAAAAVGRSNGGRGRAKRSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------------------QRDTFLTQFHALGKLLYAKRVPPDSDGAG--------GWPTAGGGXXXXXXEGRGPLAFVPEDVLSQGGMELDWALAFLQYHCVDFYTDES 337          
BLAST of mRNA_S-dermatodea_contig8206.16399.1 vs. uniprot
Match: A0A6H5KBK1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBK1_9PHAE)

HSP 1 Score: 259 bits (662), Expect = 8.730e-79
Identity = 180/319 (56.43%), Postives = 198/319 (62.07%), Query Frame = 0
Query:   48 RSRLVLLEELPGVYGEEKKARLRRLMTECARSGPCPVILSWSQASESSSYQSELEQILSRETLRMPGVQITTCNPINATLLRQHLRGVLALEGVSDPRGALVEGAVATCAVQYPFSSSLPXXXXXXXXXXXXTGDIRHALLNLQMSVGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRDTFLSQFHALGKLLYAKRLPTGVDGVGVATXXXXXXXXXXXXXXXXXXXXXRGALGFVPEEVLSRGGMDLDWALAFLQFHCVDFFTDEN 366
            R R+VL+EELP V GEEKKAR+R L+ ECARS P PVI+ WSQASES+SYQS LEQ+LSRETLRMPGVQITTCNPINATLLRQHL+GVLALEGVSDP+G LV+ A+ TCA                       GDIRHALLNLQMSVGG                             XXXXXXXXXXXXXXX     XXXX    XXXXX                 +RDTFL+QFHALGKLLYAKR P   DG G                        RG L FVPEEVLS+GGM+LDWALAFLQ+HCVDF+TDE+
Sbjct:  199 RRRVVLIEELPEVCGEEKKARMRSLIAECARSSPSPVIICWSQASESASYQSRLEQVLSRETLRMPGVQITTCNPINATLLRQHLKGVLALEGVSDPKGTLVQSAITTCA-----------------------GDIRHALLNLQMSVGGRGRSGSTAAAKAAAAVGRSNGGRGQAMLSXXXXXXXXXXXXXXXGRKKRXXXXSKSCXXXXXAGGTG------------QRDTFLTQFHALGKLLYAKRNPPDSDGAG------GWPTTGAGGERGDGGVEGRGPLAFVPEEVLSQGGMELDWALAFLQYHCVDFYTDES 476          
BLAST of mRNA_S-dermatodea_contig8206.16399.1 vs. uniprot
Match: A0A7S2PU50_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PU50_9STRA)

HSP 1 Score: 66.2 bits (160), Expect = 2.780e-8
Identity = 38/89 (42.70%), Postives = 48/89 (53.93%), Query Frame = 0
Query:  276 KRDTFLSQFHALGKLLYAKRLPTGVDGVGVATXXXXXXXXXXXXXXXXXXXXXRGALGFVPEEVLSRGGMDLDWALAFLQFHCVDFFTD 364
            KRDT LS FHALGKL++AKR P   D +                         RG L F PE++LSR GM +  A++FL +HC D+FTD
Sbjct:  210 KRDTKLSMFHALGKLIHAKRKPLCQDTM----------------EETKMWDDGRGPLEFDPEDILSRSGMAVGSAVSFLSYHCPDYFTD 282          
BLAST of mRNA_S-dermatodea_contig8206.16399.1 vs. uniprot
Match: B8C3M9_THAPS (RanBP2-type domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C3M9_THAPS)

HSP 1 Score: 61.6 bits (148), Expect = 1.280e-6
Identity = 37/89 (41.57%), Postives = 43/89 (48.31%), Query Frame = 0
Query:  276 KRDTFLSQFHALGKLLYAKRLPTGVDGVGVATXXXXXXXXXXXXXXXXXXXXXRGALGFVPEEVLSRGGMDLDWALAFLQFHCVDFFTD 364
            KRD  LS FHALGKLLYAKR P   D                           RG L FVPE+VL +  M    A++F+ +H  DFFTD
Sbjct:  682 KRDVKLSTFHALGKLLYAKRKPRSQDPYSTTEKRTGISAWDDG----------RGPLDFVPEQVLEKTDMATSSAISFIAYHSPDFFTD 760          
BLAST of mRNA_S-dermatodea_contig8206.16399.1 vs. uniprot
Match: W7TS41_9STRA (Checkpoint protein Rad24 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TS41_9STRA)

HSP 1 Score: 58.2 bits (139), Expect = 1.610e-5
Identity = 84/317 (26.50%), Postives = 124/317 (39.12%), Query Frame = 0
Query:   48 RSRLVLLEELPGVYGEEKKARLRRLMTECARSGPCPVILSWSQASESSSYQSELEQILSRETLRMPGVQITTCNPINATLLRQHLRGVLALEGVSDPRGALVEGAVATCAVQYPFSSSLPXXXXXXXXXXXXTGDIRHALLNLQMSVGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRDTFLSQFHALGKLLYAKRLPTGVDGVGVATXXXXXXXXXXXXXXXXXXXXXRGALGFVPEEVLSRGGMDLDWALAFLQFHCVDFFTD 364
            R  L+++EE+P        A  +  +     +   P ++ +++  E  +    LE++L+R  L   GV+    NP     +R+ L  + + EG+   R  +   A+  C+                       GD+RHA+L LQ+ + G                                          XXXXXXXXXXXXXXXXXX                   ++DT++S FHALGK+L+AKRLP   +                           RG L FVPEEVL R  M+ +   AF+Q H +  F D
Sbjct:  478 RRALLVMEEVPYHATGRAAAHFQAALASFLAASVHPAVVIFTEEHEDRAGSGALERLLTRPLLHAKGVRQIHINPATDANMRRILTHIASAEGLGPSRSEVE--AIVACS----------------------RGDLRHAILTLQLQLQGSRAAPNAPPRALARSDASASSSHLLRQCTGGRKGEGGRGGEDXXXXXXXXXXXXXXXXXXEAE----------------RKDTYMSSFHALGKVLHAKRLPESDES-------------------RKGEGDPRGRLSFVPEEVLKRCEMEAEGLSAFVQTHALALFGD 735          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig8206.16399.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7FR72_ECTSI1.010e-7962.34Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KBK1_9PHAE8.730e-7956.43Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2PU50_9STRA2.780e-842.70Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
B8C3M9_THAPS1.280e-641.57RanBP2-type domain-containing protein n=1 Tax=Thal... [more]
W7TS41_9STRA1.610e-526.50Checkpoint protein Rad24 n=2 Tax=Monodopsidaceae T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR12172:SF0CELL CYCLE CHECKPOINT PROTEIN RAD17coord: 31..364
IPR004582Checkpoint protein Rad17/Rad24PANTHERPTHR12172CELL CYCLE CHECKPOINT PROTEIN RAD17coord: 31..364

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig8206contigS-dermatodea_contig8206:2805..9126 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig8206.16399.1mRNA_S-dermatodea_contig8206.16399.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig8206 2796..9126 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig8206.16399.1 ID=prot_S-dermatodea_contig8206.16399.1|Name=mRNA_S-dermatodea_contig8206.16399.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=366bp
MFAAKQAHPASDQQRRRQGEKQPNGALTATGGVRSRGVGVGSGSDGGRSR
LVLLEELPGVYGEEKKARLRRLMTECARSGPCPVILSWSQASESSSYQSE
LEQILSRETLRMPGVQITTCNPINATLLRQHLRGVLALEGVSDPRGALVE
GAVATCAVQYPFSSSLPPPPPPPPLLSTTTGDIRHALLNLQMSVGGGGRG
ARPASAAAAAAMASLPPPRLALAGSGGGGGGGGGGGGGAFTTRGAGANAR
RSSRNTEAVSGTGTGTGTGTGTGTGKRDTFLSQFHALGKLLYAKRLPTGV
DGVGVATSARGRGRGGGGGGEGEGSGDGRGALGFVPEEVLSRGGMDLDWA
LAFLQFHCVDFFTDEN
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004582Checkpoint_prot_Rad17_Rad24