prot_S-dermatodea_contig8204.16397.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig8204.16397.1
Unique Nameprot_S-dermatodea_contig8204.16397.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length56
Homology
BLAST of mRNA_S-dermatodea_contig8204.16397.1 vs. uniprot
Match: A0A6H5JKW3_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKW3_9PHAE)

HSP 1 Score: 61.6 bits (148), Expect = 1.070e-9
Identity = 30/55 (54.55%), Postives = 37/55 (67.27%), Query Frame = 0
Query:    1 MRAESEGHEQTGTFSS-QGVPAGVNVITAKWVFSSKTERDGFIIKAKARFVARGF 54
            M  E +GH++TGTFS   G+P G   I+AKW+FS KT   G I+  KAR VARGF
Sbjct:  220 MTKELDGHKKTGTFSEISGLPEGRKAISAKWIFSHKTNEKGLIVDFKARMVARGF 274          
BLAST of mRNA_S-dermatodea_contig8204.16397.1 vs. uniprot
Match: A0A6H5KFR2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFR2_9PHAE)

HSP 1 Score: 60.1 bits (144), Expect = 3.770e-9
Identity = 29/52 (55.77%), Postives = 36/52 (69.23%), Query Frame = 0
Query:    4 ESEGHEQTGTFSS-QGVPAGVNVITAKWVFSSKTERDGFIIKAKARFVARGF 54
            E +GH++TGTFS   G+P G   I+AKW+FS KT   G I+  KAR VARGF
Sbjct:  299 EFDGHKKTGTFSEISGLPEGRKAISAKWIFSHKTNEKGLIVDFKARMVARGF 350          
BLAST of mRNA_S-dermatodea_contig8204.16397.1 vs. uniprot
Match: A0A6H5JR97_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR97_9PHAE)

HSP 1 Score: 60.1 bits (144), Expect = 3.850e-9
Identity = 29/52 (55.77%), Postives = 36/52 (69.23%), Query Frame = 0
Query:    4 ESEGHEQTGTFSS-QGVPAGVNVITAKWVFSSKTERDGFIIKAKARFVARGF 54
            E +GH++TGTFS   G+P G   I+AKW+FS KT   G I+  KAR VARGF
Sbjct:  248 EFDGHKKTGTFSEISGLPEGRKAISAKWIFSHKTNEKGLIVDFKARMVARGF 299          
BLAST of mRNA_S-dermatodea_contig8204.16397.1 vs. uniprot
Match: A0A6H5KF65_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF65_9PHAE)

HSP 1 Score: 60.1 bits (144), Expect = 3.870e-9
Identity = 29/52 (55.77%), Postives = 36/52 (69.23%), Query Frame = 0
Query:    4 ESEGHEQTGTFSS-QGVPAGVNVITAKWVFSSKTERDGFIIKAKARFVARGF 54
            E +GH++TGTFS   G+P G   I+AKW+FS KT   G I+  KAR VARGF
Sbjct:  258 EFDGHKKTGTFSEISGLPEGRKAISAKWIFSHKTNEKGLIVDFKARMVARGF 309          
BLAST of mRNA_S-dermatodea_contig8204.16397.1 vs. uniprot
Match: A0A6H5KR39_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR39_9PHAE)

HSP 1 Score: 60.1 bits (144), Expect = 3.870e-9
Identity = 29/52 (55.77%), Postives = 36/52 (69.23%), Query Frame = 0
Query:    4 ESEGHEQTGTFSS-QGVPAGVNVITAKWVFSSKTERDGFIIKAKARFVARGF 54
            E +GH++TGTFS   G+P G   I+AKW+FS KT   G I+  KAR VARGF
Sbjct:  139 EFDGHKKTGTFSEISGLPEGRKAISAKWIFSHKTNEKGLIVDFKARMVARGF 190          
BLAST of mRNA_S-dermatodea_contig8204.16397.1 vs. uniprot
Match: A0A6H5L6D6_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6D6_9PHAE)

HSP 1 Score: 60.1 bits (144), Expect = 3.880e-9
Identity = 29/52 (55.77%), Postives = 36/52 (69.23%), Query Frame = 0
Query:    4 ESEGHEQTGTFSS-QGVPAGVNVITAKWVFSSKTERDGFIIKAKARFVARGF 54
            E +GH++TGTFS   G+P G   I+AKW+FS KT   G I+  KAR VARGF
Sbjct:  319 EFDGHKKTGTFSEISGLPEGRKAISAKWIFSHKTNEKGLIVDFKARMVARGF 370          
BLAST of mRNA_S-dermatodea_contig8204.16397.1 vs. uniprot
Match: A0A6H5K0Q0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0Q0_9PHAE)

HSP 1 Score: 60.1 bits (144), Expect = 3.880e-9
Identity = 29/52 (55.77%), Postives = 36/52 (69.23%), Query Frame = 0
Query:    4 ESEGHEQTGTFSS-QGVPAGVNVITAKWVFSSKTERDGFIIKAKARFVARGF 54
            E +GH++TGTFS   G+P G   I+AKW+FS KT   G I+  KAR VARGF
Sbjct:  340 EFDGHKKTGTFSEISGLPEGRKAISAKWIFSHKTNEKGLIVDFKARMVARGF 391          
BLAST of mRNA_S-dermatodea_contig8204.16397.1 vs. uniprot
Match: A0A6H5K9E2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9E2_9PHAE)

HSP 1 Score: 60.1 bits (144), Expect = 3.890e-9
Identity = 29/52 (55.77%), Postives = 36/52 (69.23%), Query Frame = 0
Query:    4 ESEGHEQTGTFSS-QGVPAGVNVITAKWVFSSKTERDGFIIKAKARFVARGF 54
            E +GH++TGTFS   G+P G   I+AKW+FS KT   G I+  KAR VARGF
Sbjct:  572 EFDGHKKTGTFSEISGLPEGRKAISAKWIFSHKTNEKGLIVDFKARMVARGF 623          
BLAST of mRNA_S-dermatodea_contig8204.16397.1 vs. uniprot
Match: A0A6H5JK64_9PHAE (CCHC-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK64_9PHAE)

HSP 1 Score: 60.1 bits (144), Expect = 3.890e-9
Identity = 29/52 (55.77%), Postives = 36/52 (69.23%), Query Frame = 0
Query:    4 ESEGHEQTGTFSS-QGVPAGVNVITAKWVFSSKTERDGFIIKAKARFVARGF 54
            E +GH++TGTFS   G+P G   I+AKW+FS KT   G I+  KAR VARGF
Sbjct:  778 EFDGHKKTGTFSEISGLPEGRKAISAKWIFSHKTNEKGLIVDFKARMVARGF 829          
BLAST of mRNA_S-dermatodea_contig8204.16397.1 vs. uniprot
Match: A0A6H5JRY9_9PHAE (CCHC-type domain-containing protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRY9_9PHAE)

HSP 1 Score: 60.1 bits (144), Expect = 3.900e-9
Identity = 29/52 (55.77%), Postives = 36/52 (69.23%), Query Frame = 0
Query:    4 ESEGHEQTGTFSS-QGVPAGVNVITAKWVFSSKTERDGFIIKAKARFVARGF 54
            E +GH++TGTFS   G+P G   I+AKW+FS KT   G I+  KAR VARGF
Sbjct: 1034 EFDGHKKTGTFSEISGLPEGRKAISAKWIFSHKTNEKGLIVDFKARMVARGF 1085          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig8204.16397.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JKW3_9PHAE1.070e-954.55Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KFR2_9PHAE3.770e-955.77Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JR97_9PHAE3.850e-955.77Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KF65_9PHAE3.870e-955.77Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KR39_9PHAE3.870e-955.77Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5L6D6_9PHAE3.880e-955.77Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5K0Q0_9PHAE3.880e-955.77Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5K9E2_9PHAE3.890e-955.77Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JK64_9PHAE3.890e-955.77CCHC-type domain-containing protein (Fragment) n=1... [more]
A0A6H5JRY9_9PHAE3.900e-955.77CCHC-type domain-containing protein n=4 Tax=Ectoca... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig8204contigS-dermatodea_contig8204:4671..4838 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig8204.16397.1mRNA_S-dermatodea_contig8204.16397.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig8204 4434..4895 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig8204.16397.1 ID=prot_S-dermatodea_contig8204.16397.1|Name=mRNA_S-dermatodea_contig8204.16397.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=56bp
MRAESEGHEQTGTFSSQGVPAGVNVITAKWVFSSKTERDGFIIKAKARFV
ARGFG*
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