mRNA_S-dermatodea_contig8202.16396.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig8202.16396.1
Unique NamemRNA_S-dermatodea_contig8202.16396.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
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BLAST of mRNA_S-dermatodea_contig8202.16396.1 vs. uniprot
Match: D8LMK7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMK7_ECTSI)

HSP 1 Score: 302 bits (773), Expect = 4.710e-98
Identity = 154/247 (62.35%), Postives = 184/247 (74.49%), Query Frame = 2 
Query:  233 TDVASLSSLQLAEHTEPTGMGRLLLAQFTDREVIVYQAYKPELGTFAAEHNYFGG-GFSFERMSWIKPNFTWMVHRCGWASKHNQEVVLALHLRRDYWDSVLAQAIMSNYEAHLSTQPVGSDGVRRGSSQSHWKSSLRSSDVVMQWDPDHRPFTGHKSSYRVIQLGLRRDALAAFRGPAFGEGGVEDITEFVKTTATRH---------------GGGGHGALHGMLLPAEETYTVGDTNVAQRLGID 925
            T+V+SL++L+L E++ PT  GR LLAQFTDREVIVYQAYKPELG FA E+ YFGG GF+F+R SW+KPNFTWM+HRCGWASK NQEVVLAL LRRD+WD VL+QA+MSNYE++ ST    S  V RG +Q  WK+SL++SDVVMQWDPDH PFTGHK+++R IQLGLR DALAAFRGPAFGE G++D++ F K T   H                         +LLP EETY V D +VAQRLGID
Sbjct:   12 TNVSSLTTLRLREYSAPTATGRCLLAQFTDREVIVYQAYKPELGNFAVENQYFGGDGFNFKRTSWVKPNFTWMMHRCGWASKQNQEVVLALALRRDFWDDVLSQAVMSNYESYRSTM---SAEVPRGDAQRRWKASLQASDVVMQWDPDHMPFTGHKTNHRAIQLGLRGDALAAFRGPAFGETGIQDVSAFAKATEEIHRPRAADGXXXXXXXXXXXXXXXXXXLLLPIEETYPVVDASVAQRLGID 255
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BLAST of mRNA_S-dermatodea_contig8202.16396.1 vs. uniprot
Match: A0A401ZYX7_9CHLR (Uncharacterized protein n=1 Tax=Tengunoibacter tsumagoiensis TaxID=2014871 RepID=A0A401ZYX7_9CHLR)

HSP 1 Score: 182 bits (461), Expect = 7.920e-52
Identity = 99/212 (46.70%), Postives = 132/212 (62.26%), Query Frame = 2 
Query:  293 GRLLLAQFTDREVIVYQAYKPELGTFAAEHNYFGGGFSFERMSWIKPNFTWMVHRCGWASKHNQEVVLALHLRRDYWDSVLAQAIMSNYEAHLSTQPVGSDGVRRGSSQSHWKSSLRSSDVVMQWDPDHRPFTGHKSSYRVIQLGLRRDALAAFRGPAFGEGGVEDITEFVKTTA--TRHGGGGHGALHGMLLPAEETYTVGDTNVAQRLGI 922
            G  +LA +TD  VIVYQAY+P +G FAA H+YFGG FS  RMSWIKP F WM++RCGWASK  QEVVLA+HL+R  +D++LAQA++S Y   L              S  +WK +L+SS V +QWDPDH P +G K   R +QLGLR + L  +      +  +EDIT FVK  +   R     H     +L+P E+ Y + D+ +A+RLG+
Sbjct:   19 GSQILAHYTDSSVIVYQAYRPGIGHFAARHHYFGGEFSLSRMSWIKPGFLWMMYRCGWASKEGQEVVLAIHLKRSAFDTILAQAVLSTYVETLY------------GSMENWKQALKSSSVRLQWDPDHDP-SGQKCERRALQLGLRDEVLKQYARDWIID--IEDITPFVKQQSQFAREYPYQH-----LLVPQEKIYPILDSQLAKRLGM 210
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BLAST of mRNA_S-dermatodea_contig8202.16396.1 vs. uniprot
Match: B0BYR1_ACAM1 (Uncharacterized protein n=1 Tax=Acaryochloris marina (strain MBIC 11017) TaxID=329726 RepID=B0BYR1_ACAM1)

HSP 1 Score: 179 bits (453), Expect = 1.470e-50
Identity = 94/210 (44.76%), Postives = 129/210 (61.43%), Query Frame = 2 
Query:  293 GRLLLAQFTDREVIVYQAYKPELGTFAAEHNYFGGGFSFERMSWIKPNFTWMVHRCGWASKHNQEVVLALHLRRDYWDSVLAQAIMSNYEAHLSTQPVGSDGVRRGSSQSHWKSSLRSSDVVMQWDPDHRPFTGHKSSYRVIQLGLRRDALAAFRGPAFGEGGVEDITEFVKTTATRHGGGGHGALHGMLLPAEETYTVGDTNVAQRLGI 922
            GR++LAQ+    ++VYQAY+P +G FAA+H YFGG F   RM+WIKPNF WM++R GW +K  QEVVLA+ L+R  +DS+LAQA+ S++++ L              SQ  W+ ++++SDV +QWDPDH P  GHK   R IQLGLR DA+  +      +  +EDI++FV         G + AL   L PAE  Y V D   A RL +
Sbjct:   19 GRVILAQYDTDSIVVYQAYRPAIGNFAAQHGYFGGEFKLSRMTWIKPNFLWMMYRSGWGAKPGQEVVLAIRLQRSAFDSILAQAVHSSFQSGLYD------------SQESWQKAVQTSDVRLQWDPDHNP-AGHKLERRAIQLGLRGDAIRKYAQEWILD--IEDISDFVADQRQHVVSGNYEAL---LTPAEAPYPVSDLKTAHRLQV 210
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BLAST of mRNA_S-dermatodea_contig8202.16396.1 vs. uniprot
Match: UPI0002484C7C (DUF4291 domain-containing protein n=1 Tax=Acaryochloris sp. CCMEE 5410 TaxID=310037 RepID=UPI0002484C7C)

HSP 1 Score: 175 bits (444), Expect = 2.640e-49
Identity = 96/223 (43.05%), Postives = 132/223 (59.19%), Query Frame = 2 
Query:  272 HTEP--------TGMGRLLLAQFTDREVIVYQAYKPELGTFAAEHNYFGGGFSFERMSWIKPNFTWMVHRCGWASKHNQEVVLALHLRRDYWDSVLAQAIMSNYEAHLSTQPVGSDGVRRGSSQSHWKSSLRSSDVVMQWDPDHRPFTGHKSSYRVIQLGLRRDALAAFRGPAFGEGGVEDITEFVKTTATRHGGGGHGALHGMLLPAEETYTVGDTNVAQRL 916
            HTEP           GR++LAQ+    ++VYQAY+P +G FAA+H YFGG F   RM+WIKPNF WM++R GW +K  QEV+LA+ L+R  +DS+LAQA+ S++++ L              SQ  W+ ++ +SDV +QWDPDH P  G+K   R IQLGLRR+A+  +      +  +EDI+ FV         G + AL   L PAE  Y V D  VA +L
Sbjct:    4 HTEPYLHQKDRWPQQGRVILAQYDADSIVVYQAYRPAIGDFAAQHGYFGGEFKLSRMTWIKPNFLWMMYRAGWGAKPGQEVILAIRLKRSAFDSILAQAVHSSFQSGLYE------------SQEAWQKAVHASDVRLQWDPDHNP-AGYKLERRAIQLGLRREAIRQYAQEWILD--IEDISNFVAEQRESVISGNYEAL---LTPAESAYPVKDLEVATKL 208
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BLAST of mRNA_S-dermatodea_contig8202.16396.1 vs. uniprot
Match: D6U2C1_9CHLR (Uncharacterized protein n=3 Tax=Ktedonobacter TaxID=363276 RepID=D6U2C1_9CHLR)

HSP 1 Score: 175 bits (444), Expect = 2.890e-49
Identity = 97/210 (46.19%), Postives = 133/210 (63.33%), Query Frame = 2 
Query:  293 GRLLLAQFTDREVIVYQAYKPELGTFAAEHNYFGGGFSFERMSWIKPNFTWMVHRCGWASKHNQEVVLALHLRRDYWDSVLAQAIMSNYEAHLSTQPVGSDGVRRGSSQSHWKSSLRSSDVVMQWDPDHRPFTGHKSSYRVIQLGLRRDALAAFRGPAFGEGGVEDITEFVKTTATRHGGGGHGALHGMLLPAEETYTVGDTNVAQRLGI 922
            G+ +LAQ+ +  V+VYQAY+P +G FAA   YFGGGFS ERMSW+KPNF WM++R GWA K +QEVVLA+ L+R  +D +LAQA+ S Y+  L            GS ++ WK +L +S V +QWDPDH P  G K   RVIQLGLR   LA +      +  +EDI++FV     ++     GA   +++PAE  Y + +T++A RLGI
Sbjct:   22 GKHILAQYDETSVVVYQAYRPAIGHFAARRGYFGGGFSLERMSWVKPNFLWMMYRSGWAQKEHQEVVLAVRLKRAAFDEILAQAVHSTYKEAL-----------YGSHEA-WKQALETSHVRLQWDPDHDP-RGVKLERRVIQLGLRGPVLAQYAREWILD--IEDISQFVYE---QYHYVESGAFDQLIMPAERVYPIVNTHIAARLGI 213
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BLAST of mRNA_S-dermatodea_contig8202.16396.1 vs. uniprot
Match: UPI0019169489 (DUF4291 domain-containing protein n=1 Tax=Ktedonobacter sp. SOSP1-52 TaxID=2778366 RepID=UPI0019169489)

HSP 1 Score: 175 bits (444), Expect = 2.890e-49
Identity = 96/210 (45.71%), Postives = 132/210 (62.86%), Query Frame = 2 
Query:  293 GRLLLAQFTDREVIVYQAYKPELGTFAAEHNYFGGGFSFERMSWIKPNFTWMVHRCGWASKHNQEVVLALHLRRDYWDSVLAQAIMSNYEAHLSTQPVGSDGVRRGSSQSHWKSSLRSSDVVMQWDPDHRPFTGHKSSYRVIQLGLRRDALAAFRGPAFGEGGVEDITEFVKTTATRHGGGGHGALHGMLLPAEETYTVGDTNVAQRLGI 922
            G+ +LAQ+ +  V+VYQAY+P +G FAA   YFGGGFS ERMSW+KPNF WM++R GWA K +QEVVLA+ L+R  +D +LAQA+ S Y+  L            G+ ++ WK +L +S V +QWDPDH P  G K   R IQLGLR   LA +      +  +EDI++FV+    +H     G L  +++PAE  Y   D++VA RLG+
Sbjct:   22 GKHILAQYDETSVVVYQAYRPAIGRFAARRGYFGGGFSLERMSWVKPNFLWMMYRSGWAQKEHQEVVLAVCLKRAAFDEILAQAVHSTYKEAL-----------YGNHEA-WKQALETSHVRLQWDPDHDP-RGAKLERRAIQLGLRGPVLAQYAREWVLD--IEDISQFVRE---QHRYVESGTLDQLIMPAERVYPTADSHVAARLGM 213
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BLAST of mRNA_S-dermatodea_contig8202.16396.1 vs. uniprot
Match: A0A1Z7YUD1_9GAMM (Uncharacterized protein n=1 Tax=Gammaproteobacteria bacterium 42_54_T18 TaxID=1856293 RepID=A0A1Z7YUD1_9GAMM)

HSP 1 Score: 175 bits (443), Expect = 3.500e-49
Identity = 93/199 (46.73%), Postives = 122/199 (61.31%), Query Frame = 2 
Query:  293 GRLLLAQFTDREVIVYQAYKPELGTFAAEHNYFGGGFSFERMSWIKPNFTWMVHRCGWASKHNQEVVLALHLRRDYWDSVLAQAIMSNYEAHLSTQPVGSDGVRRGSSQSHWKSSLRSSDVVMQWDPDHRPFTGHKSSYRVIQLGLRRDALAAFRGPAFGEGGVEDITEFVKTTATRHGGGGHGALHGMLLPAEETYTV 889
            GR +LAQF D  V+VYQAYKP +G +AA++ YFGG FS+ RMSWIKPNF WM++RCGWASK  QE VLA+HL+R Y+D +L++A  S+    LS              +  W   + +SDV +QWDPDH P+ G+K + R IQLGLR D L  F+G   G   +E+IT FV   +        G L  ++ P E  Y V
Sbjct:   19 GRHILAQFDDETVVVYQAYKPSIGLYAAKNGYFGGDFSYSRMSWIKPNFLWMMYRCGWASKVGQETVLAIHLKRTYFDDLLSEAFPSSNTLGLS--------------KPEWNREVAASDVRLQWDPDHDPY-GNKETRRAIQLGLRNDYLTPFQGE--GIIAIENITGFVLEQSKHIK---KGDLSSLMTPTERCYPV 197
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BLAST of mRNA_S-dermatodea_contig8202.16396.1 vs. uniprot
Match: A0A8J3I6T5_9CHLR (Uncharacterized protein n=1 Tax=Ktedonospora formicarum TaxID=2778364 RepID=A0A8J3I6T5_9CHLR)

HSP 1 Score: 174 bits (442), Expect = 5.230e-49
Identity = 96/210 (45.71%), Postives = 121/210 (57.62%), Query Frame = 2 
Query:  293 GRLLLAQFTDREVIVYQAYKPELGTFAAEHNYFGGGFSFERMSWIKPNFTWMVHRCGWASKHNQEVVLALHLRRDYWDSVLAQAIMSNYEAHLSTQPVGSDGVRRGSSQSHWKSSLRSSDVVMQWDPDHRPFTGHKSSYRVIQLGLRRDALAAFRGPAFGEGGVEDITEFVKTTATRHGGGGHGALHGMLLPAEETYTVGDTNVAQRLGI 922
            GR +LAQ+ D  V+VYQAY   +G FAA + YFGG FS  RMSW+KPNF WM++RCGWASKHNQEVVLA+ L+R  +D +L QA+ SNY   +             SS + WK      D  +QWDPDH P  G K   R IQLG+R   LA +      +  +EDI++FV+        G +  L   L P E  Y V D  VA RLG+
Sbjct:   19 GRHILAQYNDTSVVVYQAYNRSIGHFAARNGYFGGSFSLSRMSWVKPNFLWMMYRCGWASKHNQEVVLAVRLKRAAFDKILTQAVHSNYVEEVY------------SSHAAWKQVSEDGDTRLQWDPDHDP-KGQKVERRAIQLGMRGPTLARYAREWLLD--IEDISDFVREQYEHVLSGDYDRL---LTPREMVYPVADPQVAARLGL 210
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BLAST of mRNA_S-dermatodea_contig8202.16396.1 vs. uniprot
Match: A0A7V2LL99_9CHLR (DUF4291 domain-containing protein n=1 Tax=Caldilineae bacterium TaxID=2420332 RepID=A0A7V2LL99_9CHLR)

HSP 1 Score: 174 bits (440), Expect = 1.100e-48
Identity = 95/211 (45.02%), Postives = 125/211 (59.24%), Query Frame = 2 
Query:  293 GRLLLAQFTDREVIVYQAYKPELGTFAAEHNYFGGGFSFERMSWIKPNFTWMVHRCGWASKHNQEVVLALHLRRDYWDSVLAQAIMSNYEAHLSTQPVGSDGVRRGSSQSHWKSSLRSSDVVMQWDPDHRPFTGHKSSYRVIQLGLRRDALAAFRGPAFGEGGVEDITEFVKTTATRHGGGGHGALHGMLLPAEETYTVGDTNVAQRLGID 925
            GR+LLAQ+ D  VIVYQAY+P LG +AAEH Y GG FS  RMSWIKP F WM++R GW +K NQEVVL++ + R  +D++L+ A++S+Y+  L   P              W++ +  SDV +QWDPDH P TG K + RVIQLGLRR+ +  +      E  + DI++FV    T         LH    P E  Y V D  VA RL +D
Sbjct:   19 GRVLLAQYDDESVIVYQAYRPSLGHWAAEHGYLGGDFSLNRMSWIKPGFMWMMYRSGWGTKPNQEVVLSIRIDRTAFDTILSSAVLSSYDPQLYATPE------------EWRADVARSDVRLQWDPDHGP-TGGKRARRVIQLGLRREMIRRYAQDWILE--ITDISDFVSEQRTHVLARDLDQLH---TPTESVYPVADEAVAFRLRLD 211
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BLAST of mRNA_S-dermatodea_contig8202.16396.1 vs. uniprot
Match: A0A1C0VHJ5_9NOSO (Uncharacterized protein n=3 Tax=Nostoc TaxID=1177 RepID=A0A1C0VHJ5_9NOSO)

HSP 1 Score: 171 bits (434), Expect = 8.500e-48
Identity = 91/210 (43.33%), Postives = 129/210 (61.43%), Query Frame = 2 
Query:  293 GRLLLAQFTDREVIVYQAYKPELGTFAAEHNYFGGGFSFERMSWIKPNFTWMVHRCGWASKHNQEVVLALHLRRDYWDSVLAQAIMSNYEAHLSTQPVGSDGVRRGSSQSHWKSSLRSSDVVMQWDPDHRPFTGHKSSYRVIQLGLRRDALAAFRGPAFGEGGVEDITEFVKTTATRHGGGGHGALHGMLLPAEETYTVGDTNVAQRLGI 922
            GR +LAQ+ D+ V+VYQAY+PE+G FAA + YFGG FS ERMSWIKPNF WM++RCGW +K  QEVVLA+ ++R  ++ +L QA+ S++   L              S+S W+  L+ S V +QWDPDH P +G K   R IQLGLR   LAA+      +  +EDI++FVK          +     ++ P E+ Y V D+ + ++LG+
Sbjct:   19 GRHILAQYDDQTVVVYQAYRPEIGHFAANNGYFGGEFSLERMSWIKPNFLWMMYRCGWGTKDGQEVVLAIWIQRSAFEEILRQAVHSSFVPELYP------------SKSEWQKVLKHSQVRLQWDPDHHP-SGEKLERRAIQLGLRGQVLAAYAKDWIVK--IEDISDFVKQQRQNL----NFDYTELITPQEKVYPVFDSEIQKKLGL 209
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig8202.16396.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LMK7_ECTSI4.710e-9862.35Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A401ZYX7_9CHLR7.920e-5246.70Uncharacterized protein n=1 Tax=Tengunoibacter tsu... [more]
B0BYR1_ACAM11.470e-5044.76Uncharacterized protein n=1 Tax=Acaryochloris mari... [more]
UPI0002484C7C2.640e-4943.05DUF4291 domain-containing protein n=1 Tax=Acaryoch... [more]
D6U2C1_9CHLR2.890e-4946.19Uncharacterized protein n=3 Tax=Ktedonobacter TaxI... [more]
UPI00191694892.890e-4945.71DUF4291 domain-containing protein n=1 Tax=Ktedonob... [more]
A0A1Z7YUD1_9GAMM3.500e-4946.73Uncharacterized protein n=1 Tax=Gammaproteobacteri... [more]
A0A8J3I6T5_9CHLR5.230e-4945.71Uncharacterized protein n=1 Tax=Ktedonospora formi... [more]
A0A7V2LL99_9CHLR1.100e-4845.02DUF4291 domain-containing protein n=1 Tax=Caldilin... [more]
A0A1C0VHJ5_9NOSO8.500e-4843.33Uncharacterized protein n=3 Tax=Nostoc TaxID=1177 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig8202contigS-dermatodea_contig8202:1453..6836 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score303.9
Seed ortholog evalue6.6e-80
Seed eggNOG ortholog2880.D8LMK7
EggNOG free text desc.Domain of unknown function (DUF4291)
EggNOG OGs2A9MC@1,2RYIY@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionProtein of unknown function DUF4291
Ec32 orthologEc-05_003100.1
Exons3
Model size1237
Cds size717
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig8202.16396.1prot_S-dermatodea_contig8202.16396.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig8202 1664..6527 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622925328.1160927-UTR-S-dermatodea_contig8202:1452..16631622925328.1160927-UTR-S-dermatodea_contig8202:1452..1663Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig8202 1453..1663 +
1694079858.4618156-UTR-S-dermatodea_contig8202:1452..16631694079858.4618156-UTR-S-dermatodea_contig8202:1452..1663Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig8202 1453..1663 +
1622925328.1576495-UTR-S-dermatodea_contig8202:6527..68361622925328.1576495-UTR-S-dermatodea_contig8202:6527..6836Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig8202 6528..6836 +
1694079858.535649-UTR-S-dermatodea_contig8202:6527..68361694079858.535649-UTR-S-dermatodea_contig8202:6527..6836Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig8202 6528..6836 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622925328.126646-CDS-S-dermatodea_contig8202:1663..19391622925328.126646-CDS-S-dermatodea_contig8202:1663..1939Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8202 1664..1939 +
1694079858.4744031-CDS-S-dermatodea_contig8202:1663..19391694079858.4744031-CDS-S-dermatodea_contig8202:1663..1939Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8202 1664..1939 +
1622925328.1363556-CDS-S-dermatodea_contig8202:5483..57071622925328.1363556-CDS-S-dermatodea_contig8202:5483..5707Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8202 5484..5707 +
1694079858.4852724-CDS-S-dermatodea_contig8202:5483..57071694079858.4852724-CDS-S-dermatodea_contig8202:5483..5707Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8202 5484..5707 +
1622925328.1485019-CDS-S-dermatodea_contig8202:6310..65271622925328.1485019-CDS-S-dermatodea_contig8202:6310..6527Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8202 6311..6527 +
1694079858.495539-CDS-S-dermatodea_contig8202:6310..65271694079858.495539-CDS-S-dermatodea_contig8202:6310..6527Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8202 6311..6527 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig8202.16396.1

>prot_S-dermatodea_contig8202.16396.1 ID=prot_S-dermatodea_contig8202.16396.1|Name=mRNA_S-dermatodea_contig8202.16396.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=239bp
MSENPTSTDVASLSSLQLAEHTEPTGMGRLLLAQFTDREVIVYQAYKPEL
GTFAAEHNYFGGGFSFERMSWIKPNFTWMVHRCGWASKHNQEVVLALHLR
RDYWDSVLAQAIMSNYEAHLSTQPVGSDGVRRGSSQSHWKSSLRSSDVVM
QWDPDHRPFTGHKSSYRVIQLGLRRDALAAFRGPAFGEGGVEDITEFVKT
TATRHGGGGHGALHGMLLPAEETYTVGDTNVAQRLGID*
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mRNA from alignment at S-dermatodea_contig8202:1453..6836+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig8202.16396.1 ID=mRNA_S-dermatodea_contig8202.16396.1|Name=mRNA_S-dermatodea_contig8202.16396.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=5384bp|location=Sequence derived from alignment at S-dermatodea_contig8202:1453..6836+ (Saccorhiza dermatodea SderLu1190fm monoicous)
ATATCATATGAGCAGCGAGGAGACAGAGCACTCAGCACCACAGCCGGCAC
TATCACACAGCCACCCCCGCCTTCTACCAAAATATCGCCACGGTGAGAGG
TTACACTGACAGCATCACCTACGAAATATACAGCTAACTGCCACAGAGCA
ACTCATTCGTTACAGAGCGGCGACTACACTCCACACACAAACACAAACTA
CAAGAGAAGACATGAGCGAAAATCCAACGAGCACGGATGTTGCCTCCCTG
AGCTCCCTGCAGCTGGCGGAACACACAGAGCCCACAGGGATGGGCAGGCT
CCTGCTGGCACAGTTCACCGACAGAGAGGTCATCGTCTATCAGGCGTACA
AACCGGAACTGGGCACGTTCGCTGCCGAGCATAACTACTTCGGCGGCGGC
TTCAGCTTCGAAAGAATGTCGTGGATCAAGCCAAACTTCACGTGGATGGT
GCATCGTTGCGGCTGGGCCAGCAAGCACAACCAGGAGGTGAGGTCTACGG
AACGATCGGCAGGATAAACGCATGGGGAGATGTGTGCGTGTGTGGGGGGG
GGGGGGCGTCTGGAGGGTTGTTGCGATAAGCAAATAACATTTGGTTTTGA
TGTTCGACAGGTTGATCGATTGATTCATTGACTGATTTAATTTGATTCGA
TTTATTCGTTTGGCTGATTGATTTTCACACTGATATACTTGTATATTAGT
ATCAACAGAGTAGCCGATCGGCTGAGTCCGACCCGCCTGATATTCGTTGG
CCCTTGGCACCGAAGTTAGTTTAAATCTTGATCGATTAGCAGCAGAGAAC
TCGAGAAGAGAAGAGAGAAACGAAGAGAGTCCTAAAGAAGAGCGCCACGA
GAGATCGAAGCCTCGGGCAAATAACTCACAAACAGACCGAAGACTTTTAT
TCTCCCCAGCACGCAACAGTAGAACGACCATTCAATACCACCCTGATATC
GTATATTATCTCCAGGGTAAAGACACTGATACCCTCAACACACGAACAGG
TGTCGGGAGGGATGTTGCGATAAGTGAAGAACTTTGGTTTTGATGTTCGA
CAGATTGGTCGATTGATTCATTAACTGATTGATTTGATTCGATTGGTTCG
CTTGGCTGTCTGATTTTTACAGCAACTACTACAGTAATTGTAGTAACAAT
AGAGCAGCCGATCGGCTGAGTCCGACCCGACTGACACGTGCAGCAGATAT
GCGCAAATCGAATCAAGCGAAACATGGCGAACGACTGCGTTATCGATGCG
TGCAACAACGGCAGGAAGGACTAAGGTCAACCGCAACTGTAGTCGGCGTG
CCACAACGGCATTCTGGGTTGGCTTTCGCGATTATCACATACTTCCAAGT
ACATGTTGTTGCCGGATGGGGTGAGCCCTTTTGATAGATATATTATTGAT
TGACTAGTAGGTAGCCACGGCTACGCCCGGGAGGTGTGTGCGGTCGCCCA
AATCTAAAATCAAGTTGTTTGGATCAACACAAACATGAAGTTGTTTGGCA
TCACTTCTTGATGACAGAAATCGTATGTTGGACAAAAATCGTATACTTAA
GGAAATAAACGTTCAAAAGCGCTACCAGGTACTGGTATTAAATATTAAGA
ATTGTCAACCCATATCATATACAAGGTTCCCCTTCGGGACGTGGGAGAGG
TAAAGAGTGAAAGGTGTTGCAAGGAAACATCGGCCAGGAGGGGATCGGAT
TACATGTTAGTACCACAGGACAGGATAATTATATCACTGATCATATCATA
CTGTAGTAATGATGAAAGCAACCTATCATCTATTATATAGAGCAAAAAAA
TAGCTGGGGTATATGCACAGCTAGTCAACGGAAGCCAACAACTGACAACA
CTCAAGTCACAAACTAAACACAAACACGCAAAAGAGAGTGGACGCCACTT
CCAACATTTTTTTTTTGCAGGTGTAATGTAGCTGTGGTTTGAAAATAACT
AAACCAGCTGTATACAATAGGATGATACTAACACATAAATCCTATAGCAG
TAGTAGTACATTCAGTACATATGTGTATACTGGTGTCTGCTGTATATGCA
AACTGTAGTACATACTTTTAGAGCTACAGCACCGGCTCGCTAGTAAGAAA
CACGGAATTAAGAAAATCGGCCTGAGGTTTTTGAGATTTTAAGAAATGGC
CCAGCCTCGGCATCTGCCACAACCTAAGAAAGAGCAACCCTTCCTCTGGC
GGGCCACCCTGCAACCCCTACAGAAGCAGCGCGCTGGGCGACTGAAGTAT
ATTCTCTCAATTTTATGACCCCAGCGCAGTTTGATATACTGTACTGTACT
GTACTGTACGTGGTTTGGATGTCGGCGGCTGATATTTTTTTCATATAAAC
CTTAATCAAATAAAAACCACCAAGAAACGGCGGTTACGTTATTGAAATGT
CCCCACAAAAATATGCCAAACATCTGTGCTGGTACTCCTGCTTCTGGCGA
TCCCACATTATTAAAATGTTTTGGCGCCCTGGCAAAACAGCGCGCTGGGT
TGTGCTCGATGAACGCTGCGGCCTTGCTCGGTATAAAGGCCCAGTTGGGT
AAACTGAGGCACAAGGGGGCGTTGACCACTGAGCAGTTTGAACTGTTGAA
GGCTAGAACAAAAGATGGGGCAGTCACATAACATATATTGGGCTTGCTCA
ACCAAGCATGGTCACTGCGCTGCGATGGTACGCTCGACGAGGACGAGTAC
GCTGAGGACATCAGGACAGTGATCAGTGAAATGCCACCGCCCAGCCGGAG
TAGCTCCACGGCCGCGGTTCCTACGCTAGCCTCGCAAGCACACTCTGGAC
CACCAGCGGCTCCTGCGGCTGCAGCGTCGAAAGCAGGAGGGGGTTGCAAG
CGCACGCCTAACGTGCGCCTGCAAGACCAGTAGTAGAATCATGGTTCAGT
TGGGCGTATATGGAGTATATACGGAGAATATGCGAGAGAAAAAGTGAACA
AATTAAGAAATTGAGGATTTTGTTTCTTCTACTGGCAAAAATAGGAAAGG
CCCCTTTGCGGAAGTCATGCTCGTTTTTCCAGGAAAATAAGAAATGCGGC
CTCAACCCGATATTTCGTTTCTTACTATTAATAGCGGGTCGGTACTGTAC
TGCTGAACATACATATAATATAGAGCTCGATGGGTGTATATTATAGACAG
ATACATGAATCAGTATCATACATACATAATACAGCAGTTACACACATTTA
CACATACAGTACGTGCGTGCATGTCACATGCCTGCACCCATGCTGCGGGT
GCCAACGGGCGCACAGATAGAGAGAAGGGGAGAAGAGCAACCGAGGGCCT
CCCCGCGTAGGACCACAGCAGTGCACGTAGCAGAAATACGTGAACAGACA
GCAGTGCCAGAGGTGTGTACTCTGTAGCACTGCTGCTGCTGCTGTGCAGA
TAGATACTGACATGATGTACTTCGAAGTATAATATATGAAATTCCGCACA
AAAACAATATCCACGGCTTGGGCTCTTCATGTTTTACTGTCGTTTCTGCT
GTGGTGGGTGCCCACGGGCGTGCACAAGACGAGGAAGGGAAGAAAAGTTA
TTGTGGGCCTCTCCAAGCAAGTAGCTTGCGTTACGTAGCCCACCTGGCAG
CCAGAGTTGTCAGCATGAGAAAGGAGAAATGGGAGTTTTTCCGCCGAAAA
TTCGCCGCTTATTGGCAATAATCCCGCCGCCTCGCGGTTTTAATGTTGTG
ATAGTTTGGTGGCCACGCTCGTGACACCGCTCAGGCTAGGAGCTTTCGCA
GAGTCCGGCTTTGGGAGAGAGGGTAGAGCTCGGCACCAAACACTTAACTG
CACAAGCACGTAACATCACCGCATCTGGGTGCAGATATGTCGACGTCGAA
AAAAACAGAACGCCTCCCCAGCTACCGAAACAAAGAGGTTAATTGAAAAA
CGGGAGGGAGGGGACAAAACCATCGAAATTATAAGTGTGTTTATGATGCC
TGTGACTTGTGTGGCGCCGCCCATCTTTCGACACTCACCCCCCCCTTCCG
TTCCGCATACCGACCGCTGCCGCACCTCAAGGTCGTTCTGGCACTGCACC
TGCGGCGCGACTACTGGGATTCCGTCCTGGCCCAAGCCATCATGTCCAAC
TACGAGGCGCACCTGTCCACGCAACCCGTTGGAAGTGATGGCGTTCGACG
TGGTTCTAGCCAAAGCCACTGGAAGTCGTCGCTGCGATCGTCGGATGTTG
TGATGCAATGGGACCCGGATCACCGGCCGTTCACAGGCCATAAATCAAGT
TACAGGTATGCCTGAAAAAACGGCGAACTATACAATATAATACACTCTGC
ACAAAGAGTATAAATGGTACACGTGGAATAGTTCATCATAAGGTGCTTCC
GTCGCCACGAGTCGCGATCCGCACACGCTTTATATTCAAATACTCTGTCC
TACCACGCTCAGTTGCGACCAACCTGCACATCTCATGAATGGCGTGTTTC
CAAACGTGATAAAGATAGGTGGCCTCGCTTCTCTCCAAACATGGGAGGGG
TGGCCGCGTTTCTTCCAGTCGAGGCTGCGCCCTGCGCGCATGATACAACC
AATGTCGGCCGCGACTGACTTCAAGTCTTGCAGTGAGCCGTGAGATTCAT
CGTTCCCTCCCTCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
CCCCCCCCCCCCCCCAACCCCCGCCCCCCGCGCGCCCCGCACACACCNNN
NNNNNNNGCTTTCCTTCCGTCCGAGGGCGCGCCCCGCCCGCATAAAAAAA
CCCATGTCGCCCCCCCCGGCCTCCATGTTTTCCAGTGGGCCGGCAGTTTC
CTTCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCTCCCCCACTTGCA
CACTTCAGAGTAATCCAGCTCGGCCTGCGACGCGATGCACTGGCGGCCTT
CCGAGGACCGGCGTTTGGGGAGGGAGGCGTCGAAGATATCACGGAGTTCG
TGAAGACAACAGCCACGAGGCATGGCGGAGGGGGACATGGTGCTCTGCAC
GGCATGCTGCTGCCTGCCGAGGAAACGTACACTGTCGGGGATACCAACGT
AGCGCAGCGACTGGGCATTGATTGAAGGCACCCCGGTAGATCGTAGCTAA
ATGTATTGACAGCAACCTTTCAATAGTCAATCCGAAGTATTGGCCTGGTG
CGTGTCGATTGCGCTCTGTATTTCTCAAGGGTTTGTTTTTTTCTTTTCTT
AGCAGGCCCAAGTCTCGAGGCATGCCCTCCCTGTTTCAGAGAGTTAGTTA
TGTCAATTCCTTCTTTGTATGTACTATATAGGTAATCAGTAGGGTTTTTT
CTCGATCTCCCGATTGTCTCATGTGACCACGAGCGGGATCGGCAACCATT
GGTGGGCAGGTCGGTTGTATGTGTAATCATAATA
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Coding sequence (CDS) from alignment at S-dermatodea_contig8202:1453..6836+

>mRNA_S-dermatodea_contig8202.16396.1 ID=mRNA_S-dermatodea_contig8202.16396.1|Name=mRNA_S-dermatodea_contig8202.16396.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1434bp|location=Sequence derived from alignment at S-dermatodea_contig8202:1453..6836+ (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGAGCGAAAATCCAACGAGCACGGATGTTGCCTCCCTGAGCTCCCTGCA
GCTGGCGGAACACACAGAGCCCACAGGGATGGGCAGGCTCCTGCTGGCAC
AGTTCACCGACAGAGAGGTCATCGTCTATCAGGCGTACAAACCGGAACTG
GGCACGTTCGCTGCCGAGCATAACTACTTCGGCGGCGGCTTCAGCTTCGA
AAGAATGTCGTGGATCAAGCCAAACTTCACGTGGATGGTGCATCGTTGCG
GCTGGGCCAGCAAGCACAACCAGGAGATGAGCGAAAATCCAACGAGCACG
GATGTTGCCTCCCTGAGCTCCCTGCAGCTGGCGGAACACACAGAGCCCAC
AGGGATGGGCAGGCTCCTGCTGGCACAGTTCACCGACAGAGAGGTCATCG
TCTATCAGGCGTACAAACCGGAACTGGGCACGTTCGCTGCCGAGCATAAC
TACTTCGGCGGCGGCTTCAGCTTCGAAAGAATGTCGTGGATCAAGCCAAA
CTTCACGTGGATGGTGCATCGTTGCGGCTGGGCCAGCAAGCACAACCAGG
AGGTCGTTCTGGCACTGCACCTGCGGCGCGACTACTGGGATTCCGTCCTG
GCCCAAGCCATCATGTCCAACTACGAGGCGCACCTGTCCACGCAACCCGT
TGGAAGTGATGGCGTTCGACGTGGTTCTAGCCAAAGCCACTGGAAGTCGT
CGCTGCGATCGTCGGATGTTGTGATGCAATGGGACCCGGATCACCGGCCG
TTCACAGGCCATAAATCAAGTTACAGGTCGTTCTGGCACTGCACCTGCGG
CGCGACTACTGGGATTCCGTCCTGGCCCAAGCCATCATGTCCAACTACGA
GGCGCACCTGTCCACGCAACCCGTTGGAAGTGATGGCGTTCGACGTGGTT
CTAGCCAAAGCCACTGGAAGTCGTCGCTGCGATCGTCGGATGTTGTGATG
CAATGGGACCCGGATCACCGGCCGTTCACAGGCCATAAATCAAGTTACAG
AGTAATCCAGCTCGGCCTGCGACGCGATGCACTGGCGGCCTTCCGAGGAC
CGGCGTTTGGGGAGGGAGGCGTCGAAGATATCACGGAGTTCGTGAAGACA
ACAGCCACGAGGCATGGCGGAGGGGGACATGGTGCTCTGCACGGCATGCT
GCTGCCTGCCGAGGAAACGTACACTGTCGGGGATACCAACGTAGCGCAGC
GACTGGGCATTGATTGAAGTAATCCAGCTCGGCCTGCGACGCGATGCACT
GGCGGCCTTCCGAGGACCGGCGTTTGGGGAGGGAGGCGTCGAAGATATCA
CGGAGTTCGTGAAGACAACAGCCACGAGGCATGGCGGAGGGGGACATGGT
GCTCTGCACGGCATGCTGCTGCCTGCCGAGGAAACGTACACTGTCGGGGA
TACCAACGTAGCGCAGCGACTGGGCATTGATTGA
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