prot_S-dermatodea_contig820.16395.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_S-dermatodea_contig820.16395.1
Unique Name	prot_S-dermatodea_contig820.16395.1
Type	polypeptide
Organism	Saccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length	173

Homology

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BLAST of mRNA_S-dermatodea_contig820.16395.1 vs. uniprot
Match: D7FSY6_ECTSI (cGMP-dependent protein kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSY6_ECTSI)

HSP 1 Score: 146 bits (369), Expect = 9.060e-38
Identity = 78/124 (62.90%), Postives = 99/124 (79.84%), Query Frame = 0

Query:    2 FGEMALMLKQPRSATVLCSTLPRVGMSGDTRGASGGGCVVNDIKGDDFLRMMKQSESFQQSMQIILRTRMFRRAILRLTATEVDSLSMAEMRAAFDVVDVDKSGTLDAKELVEALRNLESELTE 125
            FGEMALMLKQPRSATV+CS+    G  G T    GG CVVN+IKG+DF+RM+KQS+SF +SM++I+RTR+FRRA+L LTA   ++LS  +MRAAF++VD DKSG LDA E++EAL+ LES L E
Sbjct:  532 FGEMALMLKQPRSATVVCSSPTLPGEGGGTDRVPGGFCVVNEIKGEDFVRMLKQSDSFLKSMKVIMRTRLFRRAMLLLTAAGTETLSKEKMRAAFEMVDTDKSGYLDANEVLEALKKLESSLGE 655

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BLAST of mRNA_S-dermatodea_contig820.16395.1 vs. uniprot
Match: A0A836CF38_9STRA (cGMP-dependent protein kinase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CF38_9STRA)

HSP 1 Score: 111 bits (277), Expect = 3.390e-25
Identity = 69/164 (42.07%), Postives = 102/164 (62.20%), Query Frame = 0

Query:    2 FGEMALMLKQPRSATVLCSTLPRVGMSGDTRGASGGGCVVNDIKGDDFLRM-MKQSESFQQSMQIILRTRMFRRAILRLTATE---VDSL------SMAEMRAAFDVVDVDKSGTLDAKELVEALRNLESELTEEDVRALMALADLNQDGSISFEEFCRILRWE 155
            FGEMA++LKQPR+ATV CS           RG     CV++++ G +FL++ M +  SF++ +Q ++R R FR  + +L A +   V SL      S  E+RA FD VDVD SG ++  EL EAL  ++S LTEE VR ++A+ DL+   +ISFEEF +I+ ++
Sbjct:  596 FGEMAVLLKQPRNATVACS-----------RGCEW--CVIDEVSGAEFLKLLMSRPSSFRRDVQQLMRARQFRHGVYKLLAAQEVAVPSLDSRTTFSTEELRAVFDAVDVDDSGEIELSELTEALFRVDSGLTEEGVREIIAILDLDASNTISFEEFVKIISFD 746

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BLAST of mRNA_S-dermatodea_contig820.16395.1 vs. uniprot
Match: D7G5Y1_ECTSI (cGMP-dependent protein kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5Y1_ECTSI)

HSP 1 Score: 100 bits (249), Expect = 2.010e-21
Identity = 65/159 (40.88%), Postives = 88/159 (55.35%), Query Frame = 0

Query:    1 MFGEMALMLKQPRSATVLCSTLPRVGMSGDTRGASGGGCVVNDIKGDDFLRM-MKQSESFQQSMQIILRTRMFRRAILRLTATEVDS---LSMAEMRAAFDVVDVDKSGTLDAKELVEALRNLESELTEEDVRALMALADLNQDGSISFEEFCRILRWE 155
            +FGEMALM  QPRSA+V+C              A+ GGC V +I GDDF R+ M +   F++ +  +LR R FR  + +L  TE+ S    S  E+R  FD  D  KSGTL   EL  A    +  L E  V  +M + DL+  G +SFEEF +I+RW+
Sbjct:  760 LFGEMALMTAQPRSASVVC--------------AAEGGCAVEEISGDDFARLLMARRTGFRRDVMRMLRARQFRHGVYKLL-TELGSEATFSDEELRQVFDRADTAKSGTLSLDELKAAFLRADPLLDESAVEEIMTMLDLDAVGCVSFEEFLKIIRWD 903

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BLAST of mRNA_S-dermatodea_contig820.16395.1 vs. uniprot
Match: A0A6H5JE67_9PHAE (cGMP-dependent protein kinase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JE67_9PHAE)

HSP 1 Score: 100 bits (248), Expect = 2.810e-21
Identity = 64/159 (40.25%), Postives = 90/159 (56.60%), Query Frame = 0

Query:    1 MFGEMALMLKQPRSATVLCSTLPRVGMSGDTRGASGGGCVVNDIKGDDFLRM-MKQSESFQQSMQIILRTRMFRRAILRLTATEVDS---LSMAEMRAAFDVVDVDKSGTLDAKELVEALRNLESELTEEDVRALMALADLNQDGSISFEEFCRILRWE 155
            +FGEMALM  QPRSA+V+C              A+ GGC V++I GDDF R+ M +   F++ +  +LR R FR  + +L  TE+ S    +  E+R  FD  D  KSGTL   EL  A    +  L E  V  +M + DL+  GS+SF+EF +I+RW+
Sbjct:  992 LFGEMALMTAQPRSASVVC--------------AAEGGCAVDEISGDDFARLLMARRTGFRRDVMRMLRARQFRHGVYKLL-TELGSEATFTDEELRQVFDRADTAKSGTLSLGELKAAFLRADPLLDESAVEEIMTMLDLDAVGSVSFDEFLKIIRWD 1135

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BLAST of mRNA_S-dermatodea_contig820.16395.1 vs. uniprot
Match: A0A7S2V337_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V337_9STRA)

HSP 1 Score: 78.6 bits (192), Expect = 2.220e-15
Identity = 45/154 (29.22%), Postives = 80/154 (51.95%), Query Frame = 0

Query:    1 MFGEMALMLKQPRSATVLCSTLPRVGMSGDTRGASGGGCVVNDIKGDDFLRMMKQSESFQQSMQIILRTRMFRRAILRLTATEVDSL-SMAEMRAAFDVVDVDKSGTLDAKELVEALRNLESELTEEDVRALMALADLNQDGSISFEEFCRILR 153
            M GEM  +L +P   TV C +                 C V +I  +DF  ++  S   ++++  + R R F+ ++L +   +  +  S   +R AFD+V   KSG +  ++L   L NL +++ ++++ A+M   D+N+DG I FEEF R++R
Sbjct:    8 MVGEMGFVLNRPHECTVTCHSAE---------------CEVEEIAAEDFASLLNDSPEIKKALLKLSRKRRFKHSVLHIMPLQDGAYWSDQNLRKAFDMVQSHKSGAISLQDLKTVLCNLNNDIDDDEILAIMNAVDINRDGMIDFEEFTRVMR 146

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BLAST of mRNA_S-dermatodea_contig820.16395.1 vs. uniprot
Match: A0A090AKF1_9GAMM (Calmodulin n=1 Tax=Thioploca ingrica TaxID=40754 RepID=A0A090AKF1_9GAMM)

HSP 1 Score: 58.2 bits (139), Expect = 2.160e-8
Identity = 30/63 (47.62%), Postives = 41/63 (65.08%), Query Frame = 0

Query:   91 EMRAAFDVVDVDKSGTLDAKELVEALRNLESELTEEDVRALMALADLNQDGSISFEEFCRILR 153
            E+RAAFD  D D SG L  +EL  A    + E T+E++ A+MA AD N DG +S+EEF + +R
Sbjct:    6 EIRAAFDACDKDHSGFLKGEELKTAFSTAKHEATQEELEAIMAYADENGDGQLSYEEFAKFVR 68

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BLAST of mRNA_S-dermatodea_contig820.16395.1 vs. uniprot
Match: A0A7S1DPI9_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1DPI9_HEMAN)

HSP 1 Score: 60.1 bits (144), Expect = 3.750e-8
Identity = 28/64 (43.75%), Postives = 45/64 (70.31%), Query Frame = 0

Query:   89 MAEMRAAFDVVDVDKSGTLDAKELVEALRNLESELTEEDVRALMALADLNQDGSISFEEFCRIL 152
            + + R AFD+ D DK GT+DAKEL  ALR +  E+++++V+ ++A  D +  G I FEEFC+++
Sbjct:   90 LEQARQAFDMFDTDKGGTIDAKELGAALRAMGQEVSDDEVKGMLAEVDDDGTGEIEFEEFCQLM 153

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BLAST of mRNA_S-dermatodea_contig820.16395.1 vs. uniprot
Match: A0A7S2PE26_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PE26_9STRA)

HSP 1 Score: 59.3 bits (142), Expect = 4.280e-8
Identity = 43/148 (29.05%), Postives = 73/148 (49.32%), Query Frame = 0

Query:    1 MFGEMALMLKQPRSATVLCSTLPRVGMSGDTRGASGGGCVVNDIKGDDFLRMMKQSESFQQSMQIILRTRMFRRAILRLTATEVDSLSMAEMRAAFDVVDVDKSGTLDAKELVEALRNLESELTEEDVRALMALADLNQDGSISFEEF 148
            +FG  + +LK+ R A  +C T        DT       CVV  +  +    +       Q +++ +   + FRRA++        +    E++ AFD VDVD+SGTLDAKE+   + +L    +++D+  L++  DL   G ++F EF
Sbjct:    4 LFGVQSHVLKRNRQAAAVCKT--------DT-------CVVQSMPYEKLQALADNYPELQDTLKHLALRQEFRRAMVLQRKKSFPNRD--ELKEAFDEVDVDRSGTLDAKEIHNLMESLGMAFSDKDLALLVSSLDLGGTGEVNFSEF 134

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BLAST of mRNA_S-dermatodea_contig820.16395.1 vs. uniprot
Match: A0A4U8UVG8_STECR (Uncharacterized protein n=2 Tax=Steinernema TaxID=34507 RepID=A0A4U8UVG8_STECR)

HSP 1 Score: 57.4 bits (137), Expect = 3.250e-7
Identity = 30/74 (40.54%), Postives = 48/74 (64.86%), Query Frame = 0

Query:   79 LTATEVDSLSMAEMRAAFDVVDVDKSGTLDAKELVEALRNLESELTEEDVRALMALADLNQDGSISFEEFCRIL 152
            L+    + LS++ +RA FD +DVD  G +   EL  A + +   L+++D++A+    DLNQDG I+FEEFCR++
Sbjct:   85 LSIAHANPLSLS-LRAVFDELDVDGDGYITRSELRIAFQRMGHTLSDQDIKAIYKHVDLNQDGKINFEEFCRMM 157

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BLAST of mRNA_S-dermatodea_contig820.16395.1 vs. uniprot
Match: A0A7S3DTX7_9STRA (cGMP-dependent protein kinase n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S3DTX7_9STRA)

HSP 1 Score: 58.9 bits (141), Expect = 5.290e-7
Identity = 43/164 (26.22%), Postives = 78/164 (47.56%), Query Frame = 0

Query:    3 GEMALMLKQPRSATVLCSTLPRVGMSGDTRGASGGGCVVNDIKGDDFLRMMKQSESFQQSMQIILRTRMFRRAILRLTATEVDSLSMAEMRAAFDVV--------DVDKSGT------LDAKELVEALRNLESELTEEDVRALMALADLNQDGSISFEEFCRIL 152
            GE +++  +PR++T +C T                GC+   +KG  F ++++ S   Q S+  +   R F++A++R    E         R AFD V          +K+ T      LD   +   +R L    T+E++R ++A+ DL+ DG+++FEEF ++ 
Sbjct:  651 GEFSVLTGKPRNSTGICVTED--------------GCIAQVMKGKHFRKLVQSSPYIQDSINELSHRRDFKKAVVRRLQKE---FPYENPREAFDAVRNGRPNQPKKNKNATTKSVDRLDVDTIGSLMRELNPSYTDEEIREIVAILDLSNDGTVTFEEFKKVF 797

The following BLAST results are available for this feature:

BLAST of mRNA_S-dermatodea_contig820.16395.1 vs. uniprot

BLAST of mRNA_S-dermatodea_contig820.16395.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FSY6_ECTSI	9.060e-38	62.90	cGMP-dependent protein kinase n=1 Tax=Ectocarpus s...	[more]
A0A836CF38_9STRA	3.390e-25	42.07	cGMP-dependent protein kinase n=1 Tax=Tribonema mi...	[more]
D7G5Y1_ECTSI	2.010e-21	40.88	cGMP-dependent protein kinase n=1 Tax=Ectocarpus s...	[more]
A0A6H5JE67_9PHAE	2.810e-21	40.25	cGMP-dependent protein kinase n=1 Tax=Ectocarpus s...	[more]
A0A7S2V337_9STRA	2.220e-15	29.22	Hypothetical protein n=1 Tax=Fibrocapsa japonica T...	[more]
A0A090AKF1_9GAMM	2.160e-8	47.62	Calmodulin n=1 Tax=Thioploca ingrica TaxID=40754 R...	[more]
A0A7S1DPI9_HEMAN	3.750e-8	43.75	Hypothetical protein (Fragment) n=1 Tax=Hemiselmis...	[more]
A0A7S2PE26_9STRA	4.280e-8	29.05	Hypothetical protein n=1 Tax=Skeletonema marinoi T...	[more]
A0A4U8UVG8_STECR	3.250e-7	40.54	Uncharacterized protein n=2 Tax=Steinernema TaxID=...	[more]
A0A7S3DTX7_9STRA	5.290e-7	26.22	cGMP-dependent protein kinase n=1 Tax=Amphiprora p...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 109..129
None	No IPR available	GENE3D	1.10.238.10		coord: 76..156 e-value: 1.9E-21 score: 78.0
None	No IPR available	PANTHER	PTHR23050:SF245	CALMODULIN	coord: 42..152
None	No IPR available	PANTHER	PTHR23050	CALCIUM BINDING PROTEIN	coord: 42..152
IPR002048	EF-hand domain	SMART	SM00054	efh_1	coord: 91..119 e-value: 1.8E-5 score: 34.2 coord: 127..155 e-value: 0.0052 score: 26.0
IPR002048	EF-hand domain	PFAM	PF13499	EF-hand_7	coord: 91..152 e-value: 9.7E-15 score: 54.8
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 123..158 score: 13.593
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 87..122 score: 14.123
IPR014710	RmlC-like jelly roll fold	GENE3D	2.60.120.10		coord: 1..73 e-value: 1.0E-6 score: 30.2
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 100..112
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 136..148
IPR000595	Cyclic nucleotide-binding domain	PROSITE	PS50042	CNMP_BINDING_3	coord: 1..17 score: 9.497
IPR011992	EF-hand domain pair	SUPERFAMILY	47473	EF-hand	coord: 77..154

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
S-dermatodea_contig820	contig	S-dermatodea_contig820:175..1619 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_S-dermatodea_contig820.16395.1	mRNA_S-dermatodea_contig820.16395.1	Saccorhiza dermatodea SderLu1190fm monoicous	mRNA	S-dermatodea_contig820 163..1619 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_S-dermatodea_contig820.16395.1 ID=prot_S-dermatodea_contig820.16395.1|Name=mRNA_S-dermatodea_contig820.16395.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=173bp
MFGEMALMLKQPRSATVLCSTLPRVGMSGDTRGASGGGCVVNDIKGDDFL
RMMKQSESFQQSMQIILRTRMFRRAILRLTATEVDSLSMAEMRAAFDVVD
VDKSGTLDAKELVEALRNLESELTEEDVRALMALADLNQDGSISFEEFCR
ILRWEDGGSATNATDDQTSPGK*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR002048	EF_hand_dom
IPR014710	RmlC-like_jellyroll
IPR018247	EF_Hand_1_Ca_BS
IPR000595	cNMP-bd_dom
IPR011992	EF-hand-dom_pair