mRNA_S-dermatodea_contig820.16395.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig820.16395.1 vs. uniprot
Match: D7FSY6_ECTSI (cGMP-dependent protein kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSY6_ECTSI) HSP 1 Score: 154 bits (390), Expect = 1.250e-40 Identity = 82/129 (63.57%), Postives = 104/129 (80.62%), Query Frame = 1
Query: 1 SAGDMFGEMALMLKQPRSATVLCSTLPRVGMSGDTRGASGGGCVVNDIKGDDFLRMMKQSESFQQSMQIILRTRMFRRAILRLTATEVDSLSMAEMRAAFDVVDVDKSGTLDAKELVEALRNLESELTE 387
SAGD+FGEMALMLKQPRSATV+CS+ G G T GG CVVN+IKG+DF+RM+KQS+SF +SM++I+RTR+FRRA+L LTA ++LS +MRAAF++VD DKSG LDA E++EAL+ LES L E
Sbjct: 527 SAGDVFGEMALMLKQPRSATVVCSSPTLPGEGGGTDRVPGGFCVVNEIKGEDFVRMLKQSDSFLKSMKVIMRTRLFRRAMLLLTAAGTETLSKEKMRAAFEMVDTDKSGYLDANEVLEALKKLESSLGE 655
BLAST of mRNA_S-dermatodea_contig820.16395.1 vs. uniprot
Match: A0A836CF38_9STRA (cGMP-dependent protein kinase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CF38_9STRA) HSP 1 Score: 113 bits (282), Expect = 8.260e-26 Identity = 70/167 (41.92%), Postives = 103/167 (61.68%), Query Frame = 1
Query: 7 GDMFGEMALMLKQPRSATVLCSTLPRVGMSGDTRGASGGGCVVNDIKGDDFLRM-MKQSESFQQSMQIILRTRMFRRAILRLTATE---VDSL------SMAEMRAAFDVVDVDKSGTLDAKELVEALRNLESELTEEDVRALMALADLNQDGSISFEEFCRILRWE 477
G FGEMA++LKQPR+ATV CS RG CV++++ G +FL++ M + SF++ +Q ++R R FR + +L A + V SL S E+RA FD VDVD SG ++ EL EAL ++S LTEE VR ++A+ DL+ +ISFEEF +I+ ++
Sbjct: 593 GSYFGEMAVLLKQPRNATVACS-----------RGCEW--CVIDEVSGAEFLKLLMSRPSSFRRDVQQLMRARQFRHGVYKLLAAQEVAVPSLDSRTTFSTEELRAVFDAVDVDDSGEIELSELTEALFRVDSGLTEEGVREIIAILDLDASNTISFEEFVKIISFD 746
BLAST of mRNA_S-dermatodea_contig820.16395.1 vs. uniprot
Match: D7G5Y1_ECTSI (cGMP-dependent protein kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5Y1_ECTSI) HSP 1 Score: 104 bits (259), Expect = 1.040e-22 Identity = 67/163 (41.10%), Postives = 90/163 (55.21%), Query Frame = 1
Query: 1 SAGDMFGEMALMLKQPRSATVLCSTLPRVGMSGDTRGASGGGCVVNDIKGDDFLRM-MKQSESFQQSMQIILRTRMFRRAILRLTATEVDS---LSMAEMRAAFDVVDVDKSGTLDAKELVEALRNLESELTEEDVRALMALADLNQDGSISFEEFCRILRWE 477
S G +FGEMALM QPRSA+V+C A+ GGC V +I GDDF R+ M + F++ + +LR R FR + +L TE+ S S E+R FD D KSGTL EL A + L E V +M + DL+ G +SFEEF +I+RW+
Sbjct: 756 SPGSLFGEMALMTAQPRSASVVC--------------AAEGGCAVEEISGDDFARLLMARRTGFRRDVMRMLRARQFRHGVYKLL-TELGSEATFSDEELRQVFDRADTAKSGTLSLDELKAAFLRADPLLDESAVEEIMTMLDLDAVGCVSFEEFLKIIRWD 903
BLAST of mRNA_S-dermatodea_contig820.16395.1 vs. uniprot
Match: A0A6H5JE67_9PHAE (cGMP-dependent protein kinase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JE67_9PHAE) HSP 1 Score: 102 bits (255), Expect = 3.700e-22 Identity = 65/161 (40.37%), Postives = 91/161 (56.52%), Query Frame = 1
Query: 7 GDMFGEMALMLKQPRSATVLCSTLPRVGMSGDTRGASGGGCVVNDIKGDDFLRM-MKQSESFQQSMQIILRTRMFRRAILRLTATEVDS---LSMAEMRAAFDVVDVDKSGTLDAKELVEALRNLESELTEEDVRALMALADLNQDGSISFEEFCRILRWE 477
G +FGEMALM QPRSA+V+C A+ GGC V++I GDDF R+ M + F++ + +LR R FR + +L TE+ S + E+R FD D KSGTL EL A + L E V +M + DL+ GS+SF+EF +I+RW+
Sbjct: 990 GSLFGEMALMTAQPRSASVVC--------------AAEGGCAVDEISGDDFARLLMARRTGFRRDVMRMLRARQFRHGVYKLL-TELGSEATFTDEELRQVFDRADTAKSGTLSLGELKAAFLRADPLLDESAVEEIMTMLDLDAVGSVSFDEFLKIIRWD 1135
BLAST of mRNA_S-dermatodea_contig820.16395.1 vs. uniprot
Match: A0A7S2V337_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V337_9STRA) HSP 1 Score: 80.5 bits (197), Expect = 4.490e-16 Identity = 46/156 (29.49%), Postives = 81/156 (51.92%), Query Frame = 1
Query: 7 GDMFGEMALMLKQPRSATVLCSTLPRVGMSGDTRGASGGGCVVNDIKGDDFLRMMKQSESFQQSMQIILRTRMFRRAILRLTATEVDSL-SMAEMRAAFDVVDVDKSGTLDAKELVEALRNLESELTEEDVRALMALADLNQDGSISFEEFCRILR 471
G M GEM +L +P TV C + C V +I +DF ++ S ++++ + R R F+ ++L + + + S +R AFD+V KSG + ++L L NL +++ ++++ A+M D+N+DG I FEEF R++R
Sbjct: 6 GAMVGEMGFVLNRPHECTVTCHSAE---------------CEVEEIAAEDFASLLNDSPEIKKALLKLSRKRRFKHSVLHIMPLQDGAYWSDQNLRKAFDMVQSHKSGAISLQDLKTVLCNLNNDIDDDEILAIMNAVDINRDGMIDFEEFTRVMR 146
BLAST of mRNA_S-dermatodea_contig820.16395.1 vs. uniprot
Match: A0A7S2PE26_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PE26_9STRA) HSP 1 Score: 61.2 bits (147), Expect = 8.780e-9 Identity = 44/150 (29.33%), Postives = 74/150 (49.33%), Query Frame = 1
Query: 7 GDMFGEMALMLKQPRSATVLCSTLPRVGMSGDTRGASGGGCVVNDIKGDDFLRMMKQSESFQQSMQIILRTRMFRRAILRLTATEVDSLSMAEMRAAFDVVDVDKSGTLDAKELVEALRNLESELTEEDVRALMALADLNQDGSISFEEF 456
G +FG + +LK+ R A +C T DT CVV + + + Q +++ + + FRRA++ + E++ AFD VDVD+SGTLDAKE+ + +L +++D+ L++ DL G ++F EF
Sbjct: 2 GRLFGVQSHVLKRNRQAAAVCKT--------DT-------CVVQSMPYEKLQALADNYPELQDTLKHLALRQEFRRAMVLQRKKSFPNRD--ELKEAFDEVDVDRSGTLDAKEIHNLMESLGMAFSDKDLALLVSSLDLGGTGEVNFSEF 134
BLAST of mRNA_S-dermatodea_contig820.16395.1 vs. uniprot
Match: A0A090AKF1_9GAMM (Calmodulin n=1 Tax=Thioploca ingrica TaxID=40754 RepID=A0A090AKF1_9GAMM) HSP 1 Score: 58.2 bits (139), Expect = 2.350e-8 Identity = 30/63 (47.62%), Postives = 41/63 (65.08%), Query Frame = 1
Query: 283 EMRAAFDVVDVDKSGTLDAKELVEALRNLESELTEEDVRALMALADLNQDGSISFEEFCRILR 471
E+RAAFD D D SG L +EL A + E T+E++ A+MA AD N DG +S+EEF + +R
Sbjct: 6 EIRAAFDACDKDHSGFLKGEELKTAFSTAKHEATQEELEAIMAYADENGDGQLSYEEFAKFVR 68
BLAST of mRNA_S-dermatodea_contig820.16395.1 vs. uniprot
Match: A0A7S1DPI9_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1DPI9_HEMAN) HSP 1 Score: 60.1 bits (144), Expect = 4.090e-8 Identity = 28/64 (43.75%), Postives = 45/64 (70.31%), Query Frame = 1
Query: 277 MAEMRAAFDVVDVDKSGTLDAKELVEALRNLESELTEEDVRALMALADLNQDGSISFEEFCRIL 468
+ + R AFD+ D DK GT+DAKEL ALR + E+++++V+ ++A D + G I FEEFC+++
Sbjct: 90 LEQARQAFDMFDTDKGGTIDAKELGAALRAMGQEVSDDEVKGMLAEVDDDGTGEIEFEEFCQLM 153
BLAST of mRNA_S-dermatodea_contig820.16395.1 vs. uniprot
Match: A0A7S3DTX7_9STRA (cGMP-dependent protein kinase n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S3DTX7_9STRA) HSP 1 Score: 61.6 bits (148), Expect = 6.910e-8 Identity = 44/168 (26.19%), Postives = 81/168 (48.21%), Query Frame = 1
Query: 7 GDMFGEMALMLKQPRSATVLCSTLPRVGMSGDTRGASGGGCVVNDIKGDDFLRMMKQSESFQQSMQIILRTRMFRRAILRLTATEVDSLSMAEMRAAFDVV--------DVDKSGT------LDAKELVEALRNLESELTEEDVRALMALADLNQDGSISFEEFCRIL 468
G++ GE +++ +PR++T +C T GC+ +KG F ++++ S Q S+ + R F++A++R E R AFD V +K+ T LD + +R L T+E++R ++A+ DL+ DG+++FEEF ++
Sbjct: 647 GNLCGEFSVLTGKPRNSTGICVTED--------------GCIAQVMKGKHFRKLVQSSPYIQDSINELSHRRDFKKAVVRRLQKE---FPYENPREAFDAVRNGRPNQPKKNKNATTKSVDRLDVDTIGSLMRELNPSYTDEEIREIVAILDLSNDGTVTFEEFKKVF 797
BLAST of mRNA_S-dermatodea_contig820.16395.1 vs. uniprot
Match: A0A4U8UVG8_STECR (Uncharacterized protein n=2 Tax=Steinernema TaxID=34507 RepID=A0A4U8UVG8_STECR) HSP 1 Score: 57.4 bits (137), Expect = 3.540e-7 Identity = 30/74 (40.54%), Postives = 48/74 (64.86%), Query Frame = 1
Query: 247 LTATEVDSLSMAEMRAAFDVVDVDKSGTLDAKELVEALRNLESELTEEDVRALMALADLNQDGSISFEEFCRIL 468
L+ + LS++ +RA FD +DVD G + EL A + + L+++D++A+ DLNQDG I+FEEFCR++
Sbjct: 85 LSIAHANPLSLS-LRAVFDELDVDGDGYITRSELRIAFQRMGHTLSDQDIKAIYKHVDLNQDGKINFEEFCRMM 157 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig820.16395.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig820.16395.1 >prot_S-dermatodea_contig820.16395.1 ID=prot_S-dermatodea_contig820.16395.1|Name=mRNA_S-dermatodea_contig820.16395.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=173bp MFGEMALMLKQPRSATVLCSTLPRVGMSGDTRGASGGGCVVNDIKGDDFLback to top mRNA from alignment at S-dermatodea_contig820:163..1619+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig820.16395.1 ID=mRNA_S-dermatodea_contig820.16395.1|Name=mRNA_S-dermatodea_contig820.16395.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=1457bp|location=Sequence derived from alignment at S-dermatodea_contig820:163..1619+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig820:163..1619+ >mRNA_S-dermatodea_contig820.16395.1 ID=mRNA_S-dermatodea_contig820.16395.1|Name=mRNA_S-dermatodea_contig820.16395.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1038bp|location=Sequence derived from alignment at S-dermatodea_contig820:163..1619+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |