prot_S-dermatodea_contig82.16392.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig82.16392.1
Unique Nameprot_S-dermatodea_contig82.16392.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length110
Homology
BLAST of mRNA_S-dermatodea_contig82.16392.1 vs. uniprot
Match: D7FJL2_ECTSI (DEAD box helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJL2_ECTSI)

HSP 1 Score: 218 bits (554), Expect = 1.670e-63
Identity = 104/105 (99.05%), Postives = 105/105 (100.00%), Query Frame = 0
Query:    1 MLSRGIGVHHGGLLPILKEIVEICFSRGLVKVLFATETFAMGVNMPARTVVFNGTRKHDGKDFRDLLPGEYTQMAGRAGRRGLDKVGTVIITCWSEPPPLVNLKV 105
            MLSRGIGVHHGGLLPILKEIVEICFSRGLVKVLFATETFAMGVNMPARTVVFNGTRKHDGKDFRDLLPGEYTQMAGRAGRRGLDKVGTVIITCWSEPPPLVNLK+
Sbjct:  924 MLSRGIGVHHGGLLPILKEIVEICFSRGLVKVLFATETFAMGVNMPARTVVFNGTRKHDGKDFRDLLPGEYTQMAGRAGRRGLDKVGTVIITCWSEPPPLVNLKM 1028          
BLAST of mRNA_S-dermatodea_contig82.16392.1 vs. uniprot
Match: A0A6H5KP96_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP96_9PHAE)

HSP 1 Score: 205 bits (522), Expect = 3.330e-59
Identity = 100/106 (94.34%), Postives = 102/106 (96.23%), Query Frame = 0
Query:    1 MLSRGIGVHHGGLLPILK---EIVEICFSRGLVKVLFATETFAMGVNMPARTVVFNGTRKHDGKDFRDLLPGEYTQMAGRAGRRGLDKVGTVIITCWSEPPPLVNL 103
            MLSRG+GVHHGGLLPILK   EIVEICFSRGLVKVLFATETFAMGVNMPARTVVFNGTRKHDGKDFRDLLPGEYTQMAGRAGRRGLDKVGTVIITCWSEPPPL+ L
Sbjct:  788 MLSRGVGVHHGGLLPILKASSEIVEICFSRGLVKVLFATETFAMGVNMPARTVVFNGTRKHDGKDFRDLLPGEYTQMAGRAGRRGLDKVGTVIITCWSEPPPLMML 893          
BLAST of mRNA_S-dermatodea_contig82.16392.1 vs. uniprot
Match: A0A835Z0M0_9STRA (P-loop containing nucleoside triphosphate hydrolase protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0M0_9STRA)

HSP 1 Score: 183 bits (465), Expect = 4.880e-57
Identity = 87/98 (88.78%), Postives = 92/98 (93.88%), Query Frame = 0
Query:    7 GVHHGGLLPILKEIVEICFSRGLVKVLFATETFAMGVNMPARTVVFNGTRKHDGKDFRDLLPGEYTQMAGRAGRRGLDKVGTVIITCWSEPPPLVNLK 104
            GVHHGGLLPILKE VEI FSRG+VKVLFATETFAMGVNMPARTVVFNG RKHDG++FRDLLPGEYTQMAGRAGRRGLDKVGTV+IT WSEPPPL  L+
Sbjct:    1 GVHHGGLLPILKETVEILFSRGIVKVLFATETFAMGVNMPARTVVFNGLRKHDGREFRDLLPGEYTQMAGRAGRRGLDKVGTVLITAWSEPPPLPALR 98          
BLAST of mRNA_S-dermatodea_contig82.16392.1 vs. uniprot
Match: K8YWY6_NANGC (Antiviral helicase SKI2 (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YWY6_NANGC)

HSP 1 Score: 188 bits (477), Expect = 7.500e-54
Identity = 88/103 (85.44%), Postives = 93/103 (90.29%), Query Frame = 0
Query:    1 MLSRGIGVHHGGLLPILKEIVEICFSRGLVKVLFATETFAMGVNMPARTVVFNGTRKHDGKDFRDLLPGEYTQMAGRAGRRGLDKVGTVIITCWSEPPPLVNL 103
            +  RGIGVHHGGLLP+LKEIVEI FSRGL+K+LFATETFAMGVNMPARTVVFN  RKHDG+DFRDL PGEYTQMAGRAGRRGLDKVGTVIITCW E PPL  L
Sbjct:   28 LCKRGIGVHHGGLLPLLKEIVEILFSRGLIKILFATETFAMGVNMPARTVVFNALRKHDGRDFRDLYPGEYTQMAGRAGRRGLDKVGTVIITCWKEVPPLPTL 130          
BLAST of mRNA_S-dermatodea_contig82.16392.1 vs. uniprot
Match: A0A4D9CSQ0_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CSQ0_9STRA)

HSP 1 Score: 188 bits (477), Expect = 3.340e-53
Identity = 88/103 (85.44%), Postives = 93/103 (90.29%), Query Frame = 0
Query:    1 MLSRGIGVHHGGLLPILKEIVEICFSRGLVKVLFATETFAMGVNMPARTVVFNGTRKHDGKDFRDLLPGEYTQMAGRAGRRGLDKVGTVIITCWSEPPPLVNL 103
            +  RGIGVHHGGLLP+LKEIVEI FSRGL+K+LFATETFAMGVNMPARTVVFN  RKHDG+DFRDL PGEYTQMAGRAGRRGLDKVGTVIITCW E PPL  L
Sbjct:  286 LCKRGIGVHHGGLLPLLKEIVEILFSRGLIKILFATETFAMGVNMPARTVVFNALRKHDGRDFRDLYPGEYTQMAGRAGRRGLDKVGTVIITCWKEVPPLPTL 388          
BLAST of mRNA_S-dermatodea_contig82.16392.1 vs. uniprot
Match: A0A812XZQ5_SYMMI (SKI2 protein (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812XZQ5_SYMMI)

HSP 1 Score: 174 bits (440), Expect = 7.680e-53
Identity = 83/104 (79.81%), Postives = 91/104 (87.50%), Query Frame = 0
Query:    1 MLSRGIGVHHGGLLPILKEIVEICFSRGLVKVLFATETFAMGVNMPARTVVFNGTRKHDGKDFRDLLPGEYTQMAGRAGRRGLDKVGTVIITCWSEPPPLVNLK 104
            +L RG GVHHGGLLP+LKE VEI FS+ +VKVL ATETFAMGVNMPAR+VVFNG RKHDGK FRDLLPGEYTQMAGRAGRRG DKVGTVII  W+E PP V+L+
Sbjct:   40 LLLRGFGVHHGGLLPVLKECVEILFSKSVVKVLLATETFAMGVNMPARSVVFNGYRKHDGKGFRDLLPGEYTQMAGRAGRRGKDKVGTVIIAAWNELPPEVSLR 143          
BLAST of mRNA_S-dermatodea_contig82.16392.1 vs. uniprot
Match: A0A397D844_9STRA (Helicase C-terminal domain-containing protein (Fragment) n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397D844_9STRA)

HSP 1 Score: 180 bits (457), Expect = 3.030e-52
Identity = 86/104 (82.69%), Postives = 91/104 (87.50%), Query Frame = 0
Query:    1 MLSRGIGVHHGGLLPILKEIVEICFSRGLVKVLFATETFAMGVNMPARTVVFNGTRKHDGKDFRDLLPGEYTQMAGRAGRRGLDKVGTVIITCWSEPPPLVNLK 104
            ML RGIGVHHGGLLPILKE+VEI F RGLVKVLF+TETFAMGVNMPARTVVFNG RKHDGK FRDLLPGEYTQMAGRAGRRGLD +GTVII CW E     +L+
Sbjct:  113 MLLRGIGVHHGGLLPILKEMVEILFGRGLVKVLFSTETFAMGVNMPARTVVFNGIRKHDGKSFRDLLPGEYTQMAGRAGRRGLDAIGTVIIACWGEVSDTTSLR 216          
BLAST of mRNA_S-dermatodea_contig82.16392.1 vs. uniprot
Match: H3GLZ7_PHYRM (Uncharacterized protein n=11 Tax=Phytophthora TaxID=4783 RepID=H3GLZ7_PHYRM)

HSP 1 Score: 185 bits (470), Expect = 3.450e-52
Identity = 87/104 (83.65%), Postives = 95/104 (91.35%), Query Frame = 0
Query:    1 MLSRGIGVHHGGLLPILKEIVEICFSRGLVKVLFATETFAMGVNMPARTVVFNGTRKHDGKDFRDLLPGEYTQMAGRAGRRGLDKVGTVIITCWSEPPPLVNLK 104
            ML RGIGVHHGGLLPI+KE+VEI F RGLVKVLF+TETFAMGVNMPARTVVFNGTRKHDGK+FRDLLPGEYTQMAGRAGRRGLD VGTVII CW++ P   +L+
Sbjct:  667 MLKRGIGVHHGGLLPIIKEMVEILFGRGLVKVLFSTETFAMGVNMPARTVVFNGTRKHDGKNFRDLLPGEYTQMAGRAGRRGLDSVGTVIIACWNDVPEPTSLR 770          
BLAST of mRNA_S-dermatodea_contig82.16392.1 vs. uniprot
Match: A0A067CLG9_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CLG9_SAPPC)

HSP 1 Score: 185 bits (469), Expect = 4.690e-52
Identity = 88/104 (84.62%), Postives = 94/104 (90.38%), Query Frame = 0
Query:    1 MLSRGIGVHHGGLLPILKEIVEICFSRGLVKVLFATETFAMGVNMPARTVVFNGTRKHDGKDFRDLLPGEYTQMAGRAGRRGLDKVGTVIITCWSEPPPLVNLK 104
            ML RGIGVHHGGLLPILKE+VEI F+RGLVKVLF+TETFAMGVNMPARTVVFNGTRKHDGK FRDLLPGEYTQMAGRAGRRGLD VGTVII CW + P   +L+
Sbjct:  672 MLLRGIGVHHGGLLPILKEMVEILFARGLVKVLFSTETFAMGVNMPARTVVFNGTRKHDGKAFRDLLPGEYTQMAGRAGRRGLDTVGTVIIACWGDAPDATSLR 775          
BLAST of mRNA_S-dermatodea_contig82.16392.1 vs. uniprot
Match: A0A485LFX7_9STRA (Aste57867_20819 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LFX7_9STRA)

HSP 1 Score: 185 bits (469), Expect = 4.690e-52
Identity = 88/105 (83.81%), Postives = 93/105 (88.57%), Query Frame = 0
Query:    1 MLSRGIGVHHGGLLPILKEIVEICFSRGLVKVLFATETFAMGVNMPARTVVFNGTRKHDGKDFRDLLPGEYTQMAGRAGRRGLDKVGTVIITCWSEPPPLVNLKV 105
            ML RGIGVHHGGLLPILKE+VEI F RGLVKVLF+TETFAMGVNMPARTVVFNGTRKHDGK FRDLLPGEYTQMAGRAGRRGLD +GTVII CW E P    L++
Sbjct:  712 MLLRGIGVHHGGLLPILKEMVEILFGRGLVKVLFSTETFAMGVNMPARTVVFNGTRKHDGKTFRDLLPGEYTQMAGRAGRRGLDAIGTVIIACWGEVPDSTGLRM 816          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig82.16392.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FJL2_ECTSI1.670e-6399.05DEAD box helicase n=1 Tax=Ectocarpus siliculosus T... [more]
A0A6H5KP96_9PHAE3.330e-5994.34Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835Z0M0_9STRA4.880e-5788.78P-loop containing nucleoside triphosphate hydrolas... [more]
K8YWY6_NANGC7.500e-5485.44Antiviral helicase SKI2 (Fragment) n=1 Tax=Nannoch... [more]
A0A4D9CSQ0_9STRA3.340e-5385.44Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
A0A812XZQ5_SYMMI7.680e-5379.81SKI2 protein (Fragment) n=1 Tax=Symbiodinium micro... [more]
A0A397D844_9STRA3.030e-5282.69Helicase C-terminal domain-containing protein (Fra... [more]
H3GLZ7_PHYRM3.450e-5283.65Uncharacterized protein n=11 Tax=Phytophthora TaxI... [more]
A0A067CLG9_SAPPC4.690e-5284.62Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]
A0A485LFX7_9STRA4.690e-5283.81Aste57867_20819 protein n=1 Tax=Aphanomyces stella... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001650Helicase, C-terminalSMARTSM00490helicmild6coord: 1..82
e-value: 3.5E-12
score: 56.5
IPR001650Helicase, C-terminalPFAMPF00271Helicase_Ccoord: 6..82
e-value: 2.8E-7
score: 30.8
IPR001650Helicase, C-terminalPROSITEPS51194HELICASE_CTERcoord: 1..109
score: 9.219
NoneNo IPR availableGENE3D3.40.50.300coord: 1..105
e-value: 8.8E-51
score: 174.5
NoneNo IPR availablePANTHERPTHR12131ATP-DEPENDENT RNA AND DNA HELICASEcoord: 1..98
NoneNo IPR availablePANTHERPTHR12131:SF8HELICASE SKI2Wcoord: 1..98
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 2..98

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig82contigS-dermatodea_contig82:2406..3528 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig82.16392.1mRNA_S-dermatodea_contig82.16392.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig82 2406..3546 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig82.16392.1 ID=prot_S-dermatodea_contig82.16392.1|Name=mRNA_S-dermatodea_contig82.16392.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=110bp
MLSRGIGVHHGGLLPILKEIVEICFSRGLVKVLFATETFAMGVNMPARTV
VFNGTRKHDGKDFRDLLPGEYTQMAGRAGRRGLDKVGTVIITCWSEPPPL
VNLKVRAGL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001650Helicase_C
IPR027417P-loop_NTPase