mRNA_S-dermatodea_contig82.16392.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig82.16392.1 vs. uniprot
Match: D7FJL2_ECTSI (DEAD box helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJL2_ECTSI) HSP 1 Score: 227 bits (578), Expect = 1.260e-66 Identity = 109/111 (98.20%), Postives = 110/111 (99.10%), Query Frame = 1
Query: 1 VLGLKEMLSRGIGVHHGGLLPILKEIVEICFSRGLVKVLFATETFAMGVNMPARTVVFNGTRKHDGKDFRDLLPGEYTQMAGRAGRRGLDKVGTVIITCWSEPPPLVNLKV 333
VL LKEMLSRGIGVHHGGLLPILKEIVEICFSRGLVKVLFATETFAMGVNMPARTVVFNGTRKHDGKDFRDLLPGEYTQMAGRAGRRGLDKVGTVIITCWSEPPPLVNLK+
Sbjct: 918 VLNLKEMLSRGIGVHHGGLLPILKEIVEICFSRGLVKVLFATETFAMGVNMPARTVVFNGTRKHDGKDFRDLLPGEYTQMAGRAGRRGLDKVGTVIITCWSEPPPLVNLKM 1028
BLAST of mRNA_S-dermatodea_contig82.16392.1 vs. uniprot
Match: A0A6H5KP96_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP96_9PHAE) HSP 1 Score: 214 bits (544), Expect = 4.540e-62 Identity = 105/112 (93.75%), Postives = 107/112 (95.54%), Query Frame = 1
Query: 1 VLGLKEMLSRGIGVHHGGLLPILK---EIVEICFSRGLVKVLFATETFAMGVNMPARTVVFNGTRKHDGKDFRDLLPGEYTQMAGRAGRRGLDKVGTVIITCWSEPPPLVNL 327
VL LKEMLSRG+GVHHGGLLPILK EIVEICFSRGLVKVLFATETFAMGVNMPARTVVFNGTRKHDGKDFRDLLPGEYTQMAGRAGRRGLDKVGTVIITCWSEPPPL+ L
Sbjct: 782 VLKLKEMLSRGVGVHHGGLLPILKASSEIVEICFSRGLVKVLFATETFAMGVNMPARTVVFNGTRKHDGKDFRDLLPGEYTQMAGRAGRRGLDKVGTVIITCWSEPPPLMML 893
BLAST of mRNA_S-dermatodea_contig82.16392.1 vs. uniprot
Match: A0A835Z0M0_9STRA (P-loop containing nucleoside triphosphate hydrolase protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0M0_9STRA) HSP 1 Score: 184 bits (466), Expect = 4.390e-57 Identity = 87/98 (88.78%), Postives = 92/98 (93.88%), Query Frame = 1
Query: 37 GVHHGGLLPILKEIVEICFSRGLVKVLFATETFAMGVNMPARTVVFNGTRKHDGKDFRDLLPGEYTQMAGRAGRRGLDKVGTVIITCWSEPPPLVNLK 330
GVHHGGLLPILKE VEI FSRG+VKVLFATETFAMGVNMPARTVVFNG RKHDG++FRDLLPGEYTQMAGRAGRRGLDKVGTV+IT WSEPPPL L+
Sbjct: 1 GVHHGGLLPILKETVEILFSRGIVKVLFATETFAMGVNMPARTVVFNGLRKHDGREFRDLLPGEYTQMAGRAGRRGLDKVGTVLITAWSEPPPLPALR 98
BLAST of mRNA_S-dermatodea_contig82.16392.1 vs. uniprot
Match: K8YWY6_NANGC (Antiviral helicase SKI2 (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YWY6_NANGC) HSP 1 Score: 191 bits (484), Expect = 9.640e-55 Identity = 89/109 (81.65%), Postives = 97/109 (88.99%), Query Frame = 1
Query: 1 VLGLKEMLSRGIGVHHGGLLPILKEIVEICFSRGLVKVLFATETFAMGVNMPARTVVFNGTRKHDGKDFRDLLPGEYTQMAGRAGRRGLDKVGTVIITCWSEPPPLVNL 327
V+ + ++ RGIGVHHGGLLP+LKEIVEI FSRGL+K+LFATETFAMGVNMPARTVVFN RKHDG+DFRDL PGEYTQMAGRAGRRGLDKVGTVIITCW E PPL L
Sbjct: 22 VIRVLDLCKRGIGVHHGGLLPLLKEIVEILFSRGLIKILFATETFAMGVNMPARTVVFNALRKHDGRDFRDLYPGEYTQMAGRAGRRGLDKVGTVIITCWKEVPPLPTL 130
BLAST of mRNA_S-dermatodea_contig82.16392.1 vs. uniprot
Match: H3GLZ7_PHYRM (Uncharacterized protein n=11 Tax=Phytophthora TaxID=4783 RepID=H3GLZ7_PHYRM) HSP 1 Score: 192 bits (489), Expect = 1.220e-54 Identity = 91/110 (82.73%), Postives = 100/110 (90.91%), Query Frame = 1
Query: 1 VLGLKEMLSRGIGVHHGGLLPILKEIVEICFSRGLVKVLFATETFAMGVNMPARTVVFNGTRKHDGKDFRDLLPGEYTQMAGRAGRRGLDKVGTVIITCWSEPPPLVNLK 330
VL +KEML RGIGVHHGGLLPI+KE+VEI F RGLVKVLF+TETFAMGVNMPARTVVFNGTRKHDGK+FRDLLPGEYTQMAGRAGRRGLD VGTVII CW++ P +L+
Sbjct: 661 VLMMKEMLKRGIGVHHGGLLPIIKEMVEILFGRGLVKVLFSTETFAMGVNMPARTVVFNGTRKHDGKNFRDLLPGEYTQMAGRAGRRGLDSVGTVIIACWNDVPEPTSLR 770
BLAST of mRNA_S-dermatodea_contig82.16392.1 vs. uniprot
Match: A0A812XZQ5_SYMMI (SKI2 protein (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812XZQ5_SYMMI) HSP 1 Score: 177 bits (450), Expect = 2.980e-54 Identity = 85/110 (77.27%), Postives = 95/110 (86.36%), Query Frame = 1
Query: 1 VLGLKEMLSRGIGVHHGGLLPILKEIVEICFSRGLVKVLFATETFAMGVNMPARTVVFNGTRKHDGKDFRDLLPGEYTQMAGRAGRRGLDKVGTVIITCWSEPPPLVNLK 330
VL +++L RG GVHHGGLLP+LKE VEI FS+ +VKVL ATETFAMGVNMPAR+VVFNG RKHDGK FRDLLPGEYTQMAGRAGRRG DKVGTVII W+E PP V+L+
Sbjct: 34 VLRTEDLLLRGFGVHHGGLLPVLKECVEILFSKSVVKVLLATETFAMGVNMPARSVVFNGYRKHDGKGFRDLLPGEYTQMAGRAGRRGKDKVGTVIIAAWNELPPEVSLR 143
BLAST of mRNA_S-dermatodea_contig82.16392.1 vs. uniprot
Match: A0A662WV88_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WV88_9STRA) HSP 1 Score: 191 bits (486), Expect = 3.090e-54 Identity = 91/110 (82.73%), Postives = 99/110 (90.00%), Query Frame = 1
Query: 1 VLGLKEMLSRGIGVHHGGLLPILKEIVEICFSRGLVKVLFATETFAMGVNMPARTVVFNGTRKHDGKDFRDLLPGEYTQMAGRAGRRGLDKVGTVIITCWSEPPPLVNLK 330
VL +KEML RGIGVHHGGLLPILKE+VEI F RGLVKVLF+TETFAMGVNMPARTVVFNG RKHDGK+FRDLLPGEYTQMAGRAGRRGLD VGTVII CW++ P +L+
Sbjct: 775 VLTMKEMLKRGIGVHHGGLLPILKEMVEILFGRGLVKVLFSTETFAMGVNMPARTVVFNGIRKHDGKNFRDLLPGEYTQMAGRAGRRGLDSVGTVIIACWNDVPEPTSLR 884
BLAST of mRNA_S-dermatodea_contig82.16392.1 vs. uniprot
Match: A0A067CLG9_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CLG9_SAPPC) HSP 1 Score: 191 bits (485), Expect = 4.190e-54 Identity = 91/110 (82.73%), Postives = 99/110 (90.00%), Query Frame = 1
Query: 1 VLGLKEMLSRGIGVHHGGLLPILKEIVEICFSRGLVKVLFATETFAMGVNMPARTVVFNGTRKHDGKDFRDLLPGEYTQMAGRAGRRGLDKVGTVIITCWSEPPPLVNLK 330
VL ++EML RGIGVHHGGLLPILKE+VEI F+RGLVKVLF+TETFAMGVNMPARTVVFNGTRKHDGK FRDLLPGEYTQMAGRAGRRGLD VGTVII CW + P +L+
Sbjct: 666 VLQVREMLLRGIGVHHGGLLPILKEMVEILFARGLVKVLFSTETFAMGVNMPARTVVFNGTRKHDGKAFRDLLPGEYTQMAGRAGRRGLDTVGTVIIACWGDAPDATSLR 775
BLAST of mRNA_S-dermatodea_contig82.16392.1 vs. uniprot
Match: A0A397D844_9STRA (Helicase C-terminal domain-containing protein (Fragment) n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397D844_9STRA) HSP 1 Score: 185 bits (470), Expect = 4.730e-54 Identity = 88/110 (80.00%), Postives = 96/110 (87.27%), Query Frame = 1
Query: 1 VLGLKEMLSRGIGVHHGGLLPILKEIVEICFSRGLVKVLFATETFAMGVNMPARTVVFNGTRKHDGKDFRDLLPGEYTQMAGRAGRRGLDKVGTVIITCWSEPPPLVNLK 330
VL +++ML RGIGVHHGGLLPILKE+VEI F RGLVKVLF+TETFAMGVNMPARTVVFNG RKHDGK FRDLLPGEYTQMAGRAGRRGLD +GTVII CW E +L+
Sbjct: 107 VLQVRDMLLRGIGVHHGGLLPILKEMVEILFGRGLVKVLFSTETFAMGVNMPARTVVFNGIRKHDGKSFRDLLPGEYTQMAGRAGRRGLDAIGTVIIACWGEVSDTTSLR 216
BLAST of mRNA_S-dermatodea_contig82.16392.1 vs. uniprot
Match: A0A4D9CSQ0_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CSQ0_9STRA) HSP 1 Score: 191 bits (484), Expect = 4.740e-54 Identity = 89/109 (81.65%), Postives = 97/109 (88.99%), Query Frame = 1
Query: 1 VLGLKEMLSRGIGVHHGGLLPILKEIVEICFSRGLVKVLFATETFAMGVNMPARTVVFNGTRKHDGKDFRDLLPGEYTQMAGRAGRRGLDKVGTVIITCWSEPPPLVNL 327
V+ + ++ RGIGVHHGGLLP+LKEIVEI FSRGL+K+LFATETFAMGVNMPARTVVFN RKHDG+DFRDL PGEYTQMAGRAGRRGLDKVGTVIITCW E PPL L
Sbjct: 280 VIRVLDLCKRGIGVHHGGLLPLLKEIVEILFSRGLIKILFATETFAMGVNMPARTVVFNALRKHDGRDFRDLYPGEYTQMAGRAGRRGLDKVGTVIITCWKEVPPLPTL 388 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig82.16392.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig82.16392.1 >prot_S-dermatodea_contig82.16392.1 ID=prot_S-dermatodea_contig82.16392.1|Name=mRNA_S-dermatodea_contig82.16392.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=110bp MLSRGIGVHHGGLLPILKEIVEICFSRGLVKVLFATETFAMGVNMPARTVback to top mRNA from alignment at S-dermatodea_contig82:2406..3546- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig82.16392.1 ID=mRNA_S-dermatodea_contig82.16392.1|Name=mRNA_S-dermatodea_contig82.16392.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=1141bp|location=Sequence derived from alignment at S-dermatodea_contig82:2406..3546- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig82:2406..3546- >mRNA_S-dermatodea_contig82.16392.1 ID=mRNA_S-dermatodea_contig82.16392.1|Name=mRNA_S-dermatodea_contig82.16392.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=660bp|location=Sequence derived from alignment at S-dermatodea_contig82:2406..3546- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |