prot_S-dermatodea_contig8199.16391.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig8199.16391.1
Unique Nameprot_S-dermatodea_contig8199.16391.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length94
Homology
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BLAST of mRNA_S-dermatodea_contig8199.16391.1 vs. uniprot
Match: D7FL25_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL25_ECTSI)

HSP 1 Score: 100 bits (250), Expect = 6.540e-23
Identity = 55/75 (73.33%), Postives = 63/75 (84.00%), Query Frame = 0 
Query:   14 GAARMLAPLFLTRLLVITVAFTVTPSLGTHQLSNVEKRHHELGAQRNELFGEMQEVLGQQQEEVAACRAALALSQ 88
            G  RML PL L+++LVI  AF+V PS G+HQLSNVEKRHHELGAQRN+LF EMQE+L QQQ+EVA CRAALA SQ
Sbjct:    4 GTTRMLPPLLLSKILVI-AAFSVLPSYGSHQLSNVEKRHHELGAQRNDLFREMQELLKQQQDEVAECRAALARSQ 77
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BLAST of mRNA_S-dermatodea_contig8199.16391.1 vs. uniprot
Match: A0A6H5K1X3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1X3_9PHAE)

HSP 1 Score: 50.4 bits (119), Expect = 4.220e-5
Identity = 27/34 (79.41%), Postives = 30/34 (88.24%), Query Frame = 0 
Query:   55 LGAQRNELFGEMQEVLGQQQEEVAACRAALALSQ 88
            LGAQRN+LF EMQE+L QQQ+EVA CRAALA SQ
Sbjct:    5 LGAQRNDLFREMQELLKQQQDEVAECRAALARSQ 38
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig8199.16391.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FL25_ECTSI6.540e-2373.33Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K1X3_9PHAE4.220e-579.41Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 36..94
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 31..35
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 19..30
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..35
NoneNo IPR availableTMHMMTMhelixcoord: 13..35

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig8199contigS-dermatodea_contig8199:3614..8649 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig8199.16391.1mRNA_S-dermatodea_contig8199.16391.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig8199 3614..8657 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig8199.16391.1 ID=prot_S-dermatodea_contig8199.16391.1|Name=mRNA_S-dermatodea_contig8199.16391.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=94bp
MGRARAMDASQTTGAARMLAPLFLTRLLVITVAFTVTPSLGTHQLSNVEK
RHHELGAQRNELFGEMQEVLGQQQEEVAACRAALALSQQKGQDA
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