mRNA_S-dermatodea_contig8198.16390.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig8198.16390.1 vs. uniprot
Match: D7G401_ECTSI (RME1, RME-1/EHD family ATPase with a C-terminal EH domain n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G401_ECTSI) HSP 1 Score: 138 bits (348), Expect = 7.820e-37 Identity = 68/69 (98.55%), Postives = 69/69 (100.00%), Query Frame = 1
Query: 7 GVLSGEKQRVARGYDFVNVCHWFAERADLILLLFDAHKLDISDEFKAVIERLKGQDDKIRVILNKADQV 213
GVLSGEKQRV+RGYDFVNVCHWFAERADLILLLFDAHKLDISDEFKAVIERLKGQDDKIRVILNKADQV
Sbjct: 148 GVLSGEKQRVSRGYDFVNVCHWFAERADLILLLFDAHKLDISDEFKAVIERLKGQDDKIRVILNKADQV 216
BLAST of mRNA_S-dermatodea_contig8198.16390.1 vs. uniprot
Match: W7TVY8_9STRA (Dynamin GTPase family protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TVY8_9STRA) HSP 1 Score: 120 bits (301), Expect = 1.000e-32 Identity = 58/69 (84.06%), Postives = 62/69 (89.86%), Query Frame = 1
Query: 7 GVLSGEKQRVARGYDFVNVCHWFAERADLILLLFDAHKLDISDEFKAVIERLKGQDDKIRVILNKADQV 213
GVL+G KQ VARGYDF NVC WFAERADLILLLFDAHKLDISDEFK VIE+L+G DDKIR +LNKADQV
Sbjct: 43 GVLAGNKQTVARGYDFTNVCGWFAERADLILLLFDAHKLDISDEFKEVIEKLRGHDDKIRCVLNKADQV 111
BLAST of mRNA_S-dermatodea_contig8198.16390.1 vs. uniprot
Match: A0A7S1TT03_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TT03_9STRA) HSP 1 Score: 117 bits (294), Expect = 1.200e-30 Identity = 56/69 (81.16%), Postives = 62/69 (89.86%), Query Frame = 1
Query: 7 GVLSGEKQRVARGYDFVNVCHWFAERADLILLLFDAHKLDISDEFKAVIERLKGQDDKIRVILNKADQV 213
GVLSGEKQR+ RGYDF VC WFA+R+DLILLLFDAHKLDISDEFK+VI+ LKG +DKIR ILNKADQV
Sbjct: 148 GVLSGEKQRLTRGYDFTEVCQWFAQRSDLILLLFDAHKLDISDEFKSVIQSLKGHEDKIRCILNKADQV 216
BLAST of mRNA_S-dermatodea_contig8198.16390.1 vs. uniprot
Match: A0A835YYV9_9STRA (RME1, RME-1/EHD family ATPase with a C-terminal EH domain n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYV9_9STRA) HSP 1 Score: 121 bits (303), Expect = 1.630e-30 Identity = 61/69 (88.41%), Postives = 64/69 (92.75%), Query Frame = 1
Query: 7 GVLSGEKQRVARGYDFVNVCHWFAERADLILLLFDAHKLDISDEFKAVIERLKGQDDKIRVILNKADQV 213
GVLSGEKQRVARGYDFV V WFAERADLILLLFDAHKLDISDEF+AVIE+L+GQDDKIR ILNKAD V
Sbjct: 148 GVLSGEKQRVARGYDFVQVNTWFAERADLILLLFDAHKLDISDEFRAVIEKLRGQDDKIRCILNKADAV 216
BLAST of mRNA_S-dermatodea_contig8198.16390.1 vs. uniprot
Match: F0WLM2_9STRA (Uncharacterized protein AlNc14C147G7411 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WLM2_9STRA) HSP 1 Score: 115 bits (289), Expect = 2.010e-30 Identity = 55/69 (79.71%), Postives = 61/69 (88.41%), Query Frame = 1
Query: 7 GVLSGEKQRVARGYDFVNVCHWFAERADLILLLFDAHKLDISDEFKAVIERLKGQDDKIRVILNKADQV 213
G+LSGEKQR+ RGYDFV V WFAER+DLILLLFDAHKLDISDEF+ VIE LKG DDKIR +LNKADQ+
Sbjct: 166 GILSGEKQRIQRGYDFVQVARWFAERSDLILLLFDAHKLDISDEFQRVIEVLKGHDDKIRCVLNKADQI 234
BLAST of mRNA_S-dermatodea_contig8198.16390.1 vs. uniprot
Match: A0A6A4ZSB0_9STRA (Dynamin-type G domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4ZSB0_9STRA) HSP 1 Score: 115 bits (287), Expect = 2.560e-30 Identity = 53/69 (76.81%), Postives = 62/69 (89.86%), Query Frame = 1
Query: 7 GVLSGEKQRVARGYDFVNVCHWFAERADLILLLFDAHKLDISDEFKAVIERLKGQDDKIRVILNKADQV 213
G+LSGEKQR++RGYDFV V WFAERAD++LLLFDAHKLDISDEF+ VIE LKG DDKIR +LNK+DQ+
Sbjct: 150 GILSGEKQRISRGYDFVQVAKWFAERADMVLLLFDAHKLDISDEFQRVIEVLKGHDDKIRCVLNKSDQI 218
BLAST of mRNA_S-dermatodea_contig8198.16390.1 vs. uniprot
Match: A0A4D9CZB1_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CZB1_9STRA) HSP 1 Score: 120 bits (301), Expect = 3.220e-30 Identity = 58/69 (84.06%), Postives = 62/69 (89.86%), Query Frame = 1
Query: 7 GVLSGEKQRVARGYDFVNVCHWFAERADLILLLFDAHKLDISDEFKAVIERLKGQDDKIRVILNKADQV 213
GVL+G KQ VARGYDF NVC WFAERADLILLLFDAHKLDISDEFK VIE+L+G DDKIR +LNKADQV
Sbjct: 151 GVLAGNKQTVARGYDFTNVCGWFAERADLILLLFDAHKLDISDEFKEVIEKLRGHDDKIRCVLNKADQV 219
BLAST of mRNA_S-dermatodea_contig8198.16390.1 vs. uniprot
Match: A0A7S1XM26_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XM26_9STRA) HSP 1 Score: 117 bits (294), Expect = 1.220e-29 Identity = 56/69 (81.16%), Postives = 62/69 (89.86%), Query Frame = 1
Query: 7 GVLSGEKQRVARGYDFVNVCHWFAERADLILLLFDAHKLDISDEFKAVIERLKGQDDKIRVILNKADQV 213
GVLSGEKQR+ RGYDF VC WFA+R+DLILLLFDAHKLDISDEFK+VI+ LKG +DKIR ILNKADQV
Sbjct: 148 GVLSGEKQRLTRGYDFTEVCQWFAQRSDLILLLFDAHKLDISDEFKSVIQSLKGHEDKIRCILNKADQV 216
BLAST of mRNA_S-dermatodea_contig8198.16390.1 vs. uniprot
Match: A0A812WW14_SYMMI (Ehd1 protein (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812WW14_SYMMI) HSP 1 Score: 115 bits (287), Expect = 1.490e-29 Identity = 56/69 (81.16%), Postives = 60/69 (86.96%), Query Frame = 1
Query: 7 GVLSGEKQRVARGYDFVNVCHWFAERADLILLLFDAHKLDISDEFKAVIERLKGQDDKIRVILNKADQV 213
GVLSGEKQRV+RGYDF VC WFA RADLI+LLFD HKLDISDEF+ VIE LKG +DKIR ILNKADQV
Sbjct: 138 GVLSGEKQRVSRGYDFQKVCTWFANRADLIILLFDTHKLDISDEFRGVIEGLKGNEDKIRCILNKADQV 206
BLAST of mRNA_S-dermatodea_contig8198.16390.1 vs. uniprot
Match: A0A7S0QT92_9CHLO (Hypothetical protein n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0QT92_9CHLO) HSP 1 Score: 117 bits (294), Expect = 2.050e-29 Identity = 55/69 (79.71%), Postives = 60/69 (86.96%), Query Frame = 1
Query: 7 GVLSGEKQRVARGYDFVNVCHWFAERADLILLLFDAHKLDISDEFKAVIERLKGQDDKIRVILNKADQV 213
GVLSGEKQR+ R YDF+NVC WFA R D+ILLLFD HKLDISDEFKAVI LKG DDK+RV+LNKADQV
Sbjct: 279 GVLSGEKQRIDRSYDFINVCQWFANRCDIILLLFDPHKLDISDEFKAVIASLKGHDDKVRVVLNKADQV 347 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig8198.16390.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig8198.16390.1 >prot_S-dermatodea_contig8198.16390.1 ID=prot_S-dermatodea_contig8198.16390.1|Name=mRNA_S-dermatodea_contig8198.16390.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=71bp SIGVLSGEKQRVARGYDFVNVCHWFAERADLILLLFDAHKLDISDEFKAVback to top mRNA from alignment at S-dermatodea_contig8198:6073..6285- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig8198.16390.1 ID=mRNA_S-dermatodea_contig8198.16390.1|Name=mRNA_S-dermatodea_contig8198.16390.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=213bp|location=Sequence derived from alignment at S-dermatodea_contig8198:6073..6285- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig8198:6073..6285- >mRNA_S-dermatodea_contig8198.16390.1 ID=mRNA_S-dermatodea_contig8198.16390.1|Name=mRNA_S-dermatodea_contig8198.16390.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=426bp|location=Sequence derived from alignment at S-dermatodea_contig8198:6073..6285- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |