mRNA_S-dermatodea_contig81965.16389.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig81965.16389.1
Unique NamemRNA_S-dermatodea_contig81965.16389.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
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BLAST of mRNA_S-dermatodea_contig81965.16389.1 vs. uniprot
Match: D7G191_ECTSI (Alpha-1,3-glucosyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G191_ECTSI)

HSP 1 Score: 97.4 bits (241), Expect = 2.170e-22
Identity = 42/48 (87.50%), Postives = 43/48 (89.58%), Query Frame = 1 
Query:    1 FDLEYWGLDYPPLTAYVSWVCGQLSRIAEPASMTLGLSRGYETPSHKV 144
            FDLEYWGLDYPPLTAYVSW CGQLSR+ EPASM LGLSRGYET SHK 
Sbjct:   70 FDLEYWGLDYPPLTAYVSWACGQLSRVVEPASMALGLSRGYETQSHKA 117
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BLAST of mRNA_S-dermatodea_contig81965.16389.1 vs. uniprot
Match: A0A5N5QXE3_9AGAM (Alpha-1,3-glucosyltransferase n=1 Tax=Ceratobasidium theobromae TaxID=1582974 RepID=A0A5N5QXE3_9AGAM)

HSP 1 Score: 77.0 bits (188), Expect = 4.170e-15
Identity = 31/47 (65.96%), Postives = 38/47 (80.85%), Query Frame = 1 
Query:    1 FDLEYWGLDYPPLTAYVSWVCGQLSRIAEPASMTLGLSRGYETPSHK 141
            +DLEYWGLDYPPLTAYVSW+CG ++    PA + L  SRGYE+P+HK
Sbjct:  171 YDLEYWGLDYPPLTAYVSWICGFIAHKINPAWVALDASRGYESPTHK 217
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BLAST of mRNA_S-dermatodea_contig81965.16389.1 vs. uniprot
Match: A0A7S2R1X2_9STRA (Alpha-1,3-glucosyltransferase (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2R1X2_9STRA)

HSP 1 Score: 71.6 bits (174), Expect = 1.070e-14
Identity = 33/49 (67.35%), Postives = 37/49 (75.51%), Query Frame = 1 
Query:    1 FDLEYWGLDYPPLTAYVSWVCGQLSRI-AEPASMTLGLSRGYETPSHKV 144
            +DLEYWGLDYPPLTAYVS++CG  S I   P +M L LSRGYE P HK 
Sbjct:   51 YDLEYWGLDYPPLTAYVSYICGYGSSIFVGPETMALELSRGYEDPIHKA 99
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BLAST of mRNA_S-dermatodea_contig81965.16389.1 vs. uniprot
Match: A0A5M3MQG7_CONPW (Alpha-1,3-glucosyltransferase n=1 Tax=Coniophora puteana (strain RWD-64-598) TaxID=741705 RepID=A0A5M3MQG7_CONPW)

HSP 1 Score: 75.1 bits (183), Expect = 1.980e-14
Identity = 30/48 (62.50%), Postives = 37/48 (77.08%), Query Frame = 1 
Query:    1 FDLEYWGLDYPPLTAYVSWVCGQLSRIAEPASMTLGLSRGYETPSHKV 144
            +DL+YWGLDYPPLTAYVSW+CGQ+  +  PA + L  SRG ETP  K+
Sbjct:   58 YDLQYWGLDYPPLTAYVSWICGQVGALVNPAWVALDSSRGIETPESKL 105
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BLAST of mRNA_S-dermatodea_contig81965.16389.1 vs. uniprot
Match: UPI001068F054 (dolichyl pyrophosphate Man9GlcNAc2 alpha-1,3-glucosyltransferase-like n=1 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI001068F054)

HSP 1 Score: 74.7 bits (182), Expect = 2.680e-14
Identity = 30/47 (63.83%), Postives = 37/47 (78.72%), Query Frame = 1 
Query:    4 DLEYWGLDYPPLTAYVSWVCGQLSRIAEPASMTLGLSRGYETPSHKV 144
            DL+YWGLDYPPLTAY SW+CG L+ I  PA + L  SRG+E+P HK+
Sbjct:   80 DLQYWGLDYPPLTAYHSWLCGYLANIINPAWVNLNTSRGFESPEHKL 126
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BLAST of mRNA_S-dermatodea_contig81965.16389.1 vs. uniprot
Match: A0A1A8IJR2_NOTKU (Alpha-1,3-glucosyltransferase (Fragment) n=1 Tax=Nothobranchius kuhntae TaxID=321403 RepID=A0A1A8IJR2_NOTKU)

HSP 1 Score: 70.9 bits (172), Expect = 3.270e-14
Identity = 28/47 (59.57%), Postives = 36/47 (76.60%), Query Frame = 1 
Query:    4 DLEYWGLDYPPLTAYVSWVCGQLSRIAEPASMTLGLSRGYETPSHKV 144
            DL YWGLDYPPLTAY SW+C  +++I  P  + L  SRGYE+P+HK+
Sbjct:   36 DLNYWGLDYPPLTAYHSWICAYIAKIINPEWVELHRSRGYESPAHKL 82
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BLAST of mRNA_S-dermatodea_contig81965.16389.1 vs. uniprot
Match: F1A4M3_DICPU (Alpha-1,3-glucosyltransferase n=1 Tax=Dictyostelium purpureum TaxID=5786 RepID=F1A4M3_DICPU)

HSP 1 Score: 73.9 bits (180), Expect = 5.030e-14
Identity = 32/47 (68.09%), Postives = 38/47 (80.85%), Query Frame = 1 
Query:    4 DLEYWGLDYPPLTAYVSWVCGQLSRIAEPASMTLGLSRGYETPSHKV 144
            +L YWGLDYPPLTAY+SWV G++  I EPASM L  SRGYETP+ K+
Sbjct:   74 NLLYWGLDYPPLTAYLSWVYGKIGEIVEPASMELYTSRGYETPTSKL 120
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BLAST of mRNA_S-dermatodea_contig81965.16389.1 vs. uniprot
Match: A0A0K6FRI4_9AGAM (Alpha-1,3-glucosyltransferase n=2 Tax=Rhizoctonia solani TaxID=456999 RepID=A0A0K6FRI4_9AGAM)

HSP 1 Score: 73.9 bits (180), Expect = 5.060e-14
Identity = 29/47 (61.70%), Postives = 38/47 (80.85%), Query Frame = 1 
Query:    1 FDLEYWGLDYPPLTAYVSWVCGQLSRIAEPASMTLGLSRGYETPSHK 141
            +DL+YWGLDYPPLTAY+SWVCG ++ +  PA + L  SRGYE+P+ K
Sbjct:  187 YDLQYWGLDYPPLTAYISWVCGFIAHMINPAWVALDASRGYESPTSK 233
[Close]
BLAST of mRNA_S-dermatodea_contig81965.16389.1 vs. uniprot
Match: A0A0C2WHA5_9AGAM (Alpha-1,3-glucosyltransferase n=1 Tax=Serendipita vermifera MAFF 305830 TaxID=933852 RepID=A0A0C2WHA5_9AGAM)

HSP 1 Score: 73.9 bits (180), Expect = 5.060e-14
Identity = 29/48 (60.42%), Postives = 38/48 (79.17%), Query Frame = 1 
Query:    1 FDLEYWGLDYPPLTAYVSWVCGQLSRIAEPASMTLGLSRGYETPSHKV 144
            +DL YWGLDYPPLTAYVSW+CG ++ +  PA + L +SRG ETP+ K+
Sbjct:  195 YDLPYWGLDYPPLTAYVSWICGYVANMINPAWVALDVSRGIETPTSKI 242
[Close]
BLAST of mRNA_S-dermatodea_contig81965.16389.1 vs. uniprot
Match: A0A8H3BZH5_9AGAM (Alpha-1,3-glucosyltransferase n=1 Tax=Rhizoctonia solani TaxID=456999 RepID=A0A8H3BZH5_9AGAM)

HSP 1 Score: 70.9 bits (172), Expect = 9.110e-14
Identity = 29/47 (61.70%), Postives = 37/47 (78.72%), Query Frame = 1 
Query:    1 FDLEYWGLDYPPLTAYVSWVCGQLSRIAEPASMTLGLSRGYETPSHK 141
            +DL+YWGLDYPPLTAYVSWVCG ++    PA + L  SRG+E+P+ K
Sbjct:   26 YDLQYWGLDYPPLTAYVSWVCGFIAHKINPAWVALDASRGHESPTSK 72
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig81965.16389.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G191_ECTSI2.170e-2287.50Alpha-1,3-glucosyltransferase n=2 Tax=Ectocarpus T... [more]
A0A5N5QXE3_9AGAM4.170e-1565.96Alpha-1,3-glucosyltransferase n=1 Tax=Ceratobasidi... [more]
A0A7S2R1X2_9STRA1.070e-1467.35Alpha-1,3-glucosyltransferase (Fragment) n=1 Tax=E... [more]
A0A5M3MQG7_CONPW1.980e-1462.50Alpha-1,3-glucosyltransferase n=1 Tax=Coniophora p... [more]
UPI001068F0542.680e-1463.83dolichyl pyrophosphate Man9GlcNAc2 alpha-1,3-gluco... [more]
A0A1A8IJR2_NOTKU3.270e-1459.57Alpha-1,3-glucosyltransferase (Fragment) n=1 Tax=N... [more]
F1A4M3_DICPU5.030e-1468.09Alpha-1,3-glucosyltransferase n=1 Tax=Dictyosteliu... [more]
A0A0K6FRI4_9AGAM5.060e-1461.70Alpha-1,3-glucosyltransferase n=2 Tax=Rhizoctonia ... [more]
A0A0C2WHA5_9AGAM5.060e-1460.42Alpha-1,3-glucosyltransferase n=1 Tax=Serendipita ... [more]
A0A8H3BZH5_9AGAM9.110e-1461.70Alpha-1,3-glucosyltransferase n=1 Tax=Rhizoctonia ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig81965contigS-dermatodea_contig81965:563..730 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score97.1
Seed ortholog evalue2.9e-18
Seed eggNOG ortholog2880.D7G191
Preferred nameALG6
KEGG koko:K03848
KEGG ReactionR06262
KEGG Pathwayko00510,ko01100,map00510,map01100
KEGG ModuleM00055
GOsGO:0003674,GO:0003824,GO:0004583,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0006091,GO:0006464,GO:0006486,GO:0006487,GO:0006488,GO:0006490,GO:0006629,GO:0006807,GO:0007275,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009060,GO:0009100,GO:0009101,GO:0009987,GO:0012505,GO:0015980,GO:0016020,GO:0016021,GO:0016740,GO:0016757,GO:0016758,GO:0018193,GO:0018196,GO:0018279,GO:0019538,GO:0031224,GO:0031984,GO:0032501,GO:0032502,GO:0034645,GO:0036211,GO:0040003,GO:0042175,GO:0042281,GO:0042335,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043413,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0045333,GO:0046527,GO:0048856,GO:0055114,GO:0070085,GO:0071704,GO:0098827,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576
EggNOG free text desc.dolichyl pyrophosphate Man9GlcNAc2 alpha-1,3-glucosyltransferase activity
EggNOG OGsKOG2575@1,KOG2575@2759
EC2.4.1.267
COG Functional cat.M
CAZyGT57
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01003
Hectar predicted targeting categoryno signal peptide or anchor
Exons1
Model size168
Cds size168
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622925327.663442-CDS-S-dermatodea_contig81965:562..7301622925327.663442-CDS-S-dermatodea_contig81965:562..730Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig81965 563..730 -
1694079858.1778593-CDS-S-dermatodea_contig81965:562..7301694079858.1778593-CDS-S-dermatodea_contig81965:562..730Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig81965 563..730 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig81965.16389.1prot_S-dermatodea_contig81965.16389.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig81965 563..730 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig81965.16389.1

>prot_S-dermatodea_contig81965.16389.1 ID=prot_S-dermatodea_contig81965.16389.1|Name=mRNA_S-dermatodea_contig81965.16389.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=56bp
FDLEYWGLDYPPLTAYVSWVCGQLSRIAEPASMTLGLSRGYETPSHKVGT
VKGAR*
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mRNA from alignment at S-dermatodea_contig81965:563..730-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig81965.16389.1 ID=mRNA_S-dermatodea_contig81965.16389.1|Name=mRNA_S-dermatodea_contig81965.16389.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=168bp|location=Sequence derived from alignment at S-dermatodea_contig81965:563..730- (Saccorhiza dermatodea SderLu1190fm monoicous)
TTCGACTTAGAGTACTGGGGGCTGGACTACCCTCCCTTGACCGCGTATGT
GTCTTGGGTCTGCGGGCAGCTGTCGAGGATTGCCGAGCCTGCATCCATGA
CCCTTGGGCTGTCTCGCGGATATGAGACGCCAAGTCACAAGGTGGGCACG
GTGAAGGGCGCTCGATAG
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Coding sequence (CDS) from alignment at S-dermatodea_contig81965:563..730-

>mRNA_S-dermatodea_contig81965.16389.1 ID=mRNA_S-dermatodea_contig81965.16389.1|Name=mRNA_S-dermatodea_contig81965.16389.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=336bp|location=Sequence derived from alignment at S-dermatodea_contig81965:563..730- (Saccorhiza dermatodea SderLu1190fm monoicous)
TTCGACTTAGAGTACTGGGGGCTGGACTACCCTCCCTTGACCGCGTATGT
GTCTTGGGTCTGCGGGCAGCTGTCGAGGATTGCCGAGCCTGCATCCATGA
CCCTTGGGCTGTCTCGCGGATATGAGACGCCAAGTCACAAGGTGGGCACG
GTGAAGGGCGCTCGATAGTTCGACTTAGAGTACTGGGGGCTGGACTACCC
TCCCTTGACCGCGTATGTGTCTTGGGTCTGCGGGCAGCTGTCGAGGATTG
CCGAGCCTGCATCCATGACCCTTGGGCTGTCTCGCGGATATGAGACGCCA
AGTCACAAGGTGGGCACGGTGAAGGGCGCTCGATAG
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