prot_S-dermatodea_contig81711.16369.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig81711.16369.1
Unique Nameprot_S-dermatodea_contig81711.16369.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length36
Homology
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BLAST of mRNA_S-dermatodea_contig81711.16369.1 vs. uniprot
Match: D8LHU3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHU3_ECTSI)

HSP 1 Score: 70.1 bits (170), Expect = 4.640e-13
Identity = 28/36 (77.78%), Postives = 34/36 (94.44%), Query Frame = 0 
Query:    1 MVGSKVRVYWDGDNEWYAGRIVRFKASKSRPYLVRW 36
            MVGS+VRVYWDGDNEWY+GRIVRFK+++  PYLVR+
Sbjct:  271 MVGSRVRVYWDGDNEWYSGRIVRFKSTQREPYLVRY 306
[Close]
BLAST of mRNA_S-dermatodea_contig81711.16369.1 vs. uniprot
Match: A0A6H5KE90_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE90_9PHAE)

HSP 1 Score: 69.7 bits (169), Expect = 4.680e-13
Identity = 28/35 (80.00%), Postives = 33/35 (94.29%), Query Frame = 0 
Query:    1 MVGSKVRVYWDGDNEWYAGRIVRFKASKSRPYLVR 35
            MVGS+VRVYWDGDNEWY+GRIVRFK+++  PYLVR
Sbjct:  271 MVGSRVRVYWDGDNEWYSGRIVRFKSTQREPYLVR 305
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig81711.16369.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LHU3_ECTSI4.640e-1377.78Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KE90_9PHAE4.680e-1380.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.30.30.140coord: 1..36
e-value: 6.8E-6
score: 27.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig81711contigS-dermatodea_contig81711:88..195 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig81711.16369.1mRNA_S-dermatodea_contig81711.16369.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig81711 88..210 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig81711.16369.1 ID=prot_S-dermatodea_contig81711.16369.1|Name=mRNA_S-dermatodea_contig81711.16369.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=36bp
MVGSKVRVYWDGDNEWYAGRIVRFKASKSRPYLVRW
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