prot_S-dermatodea_contig8157.16355.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig8157.16355.1
Unique Nameprot_S-dermatodea_contig8157.16355.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length785
Homology
BLAST of mRNA_S-dermatodea_contig8157.16355.1 vs. uniprot
Match: A0A6H5KLZ7_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLZ7_9PHAE)

HSP 1 Score: 358 bits (919), Expect = 3.140e-107
Identity = 286/680 (42.06%), Postives = 371/680 (54.56%), Query Frame = 0
Query:   28 GRLSTEVEGLKSANVQLTQAVAAAKAESSEFRHQAETALKCKQADASGAAAREEVLRADVEQARARADTMSQSLAEAIREQSGLVAETANAKATAEVLEAKIRAAELERAQATGREAERCQALTNQCTPSTVPGPGWRGDLSDSFGDGMEKLLADKLEDASKHISQLRIMLRQEVGRREVAEAEVSEAQGYLNSSRQELGELRHLAWKLEQMGRNSITHIDEKNQAIKQLEEQLQYRGVGAPVGEREGGLAGKS-----RRRSGRKIATLGGREGDREERRGREGEERMPRRRTAGDTESEEFYTGNRSTESGERTASRRECVKNFSGNRNKTQRNLAGKETHKTLLRALSGLRSDLQGVNDQLEEAKAENEGIGRRFAEGVAMRAERLVHALQQAGREKIEPQRQASEAQAEAAKDRESAAELTRVVQGISRILLDNLGVAIPNGLGDRDVVGEEIEGVFEKRLSELSAAVSGAMCRLEERAKHALLGQLPSVPLNVESSTSAGRQDRALTIDGMIWGDRSKEDFNMLAQLQKIEVESELQWLRARLGEMTDKYSRAVAERDNVDSAPSQEAREHAQEEAARAADAHASAIAALEATLAVEKSRCQDLRVRLERKTREHQVELTEADKKLQNKEHELDKVQQALEQTQFTLGRESARRARLEKKYSEMEERGLVSPRSV 702
            GRLSTEVE L+  N  L + +A A+A  SE   + + ALK K+ DA+  AAREE LRA  EQARARADTMSQSLAE                                                                           +LADKL++AS HIS+LR +LRQEV RRE AEAEVSEAQG+                           H+D  +QA++ LE +L  RGV   VG   GG AG+       R  GR + + GGR   R E  G+E                          E+G   A RR   +  S          + K   +  L AL+GLR++L+ VN QL +AKAENE   R   E VA+R ERL  A++QAG+++ E QRQASEA+A  A DR+SA  L RVV+GIS ILLD L V +P  L   +  GE  + + E+ L EL+AAV+ A+ +++ERAK A+    P+ P     +   GR   + T+DGM+WG+RSK+DFNMLAQLQKIE ES+LQ L+ARL +MT+KYSRA+A+++ VDS P +E +E A++E ARAA AH+  ++ALE TLA EKS CQDLR++LER+TREHQV L + D++L   +                  RE ARRARL+KKYSE+E+RGLVSPRSV
Sbjct:  298 GRLSTEVERLRGENGHLMRGIADAEARGSELELRLQAALKSKEIDAAAGAAREEALRATAEQARARADTMSQSLAE---------------------------------------------------------------------------MLADKLQEASTHISELRTVLRQEVRRREAAEAEVSEAQGF--------------------------AHMDGNSQAVRHLEGELHARGVAGTVG---GGEAGRGPLREEEREDGRSMLS-GGRARGRSEGGGKE--------------------------EAGLLCARRRRVPQGLS----------SWKGGQRLFLAALAGLRAELRCVNTQLGKAKAENEVFVRHCTERVAVRVERLERAVRQAGQKQAEAQRQASEAEAAGAIDRKSADTLKRVVKGISSILLDRLAVTMPTYLRGGEEAGERGQEMLERGLEELTAAVTDALSKVKERAKQAV----PAQPHGDSLAPGNGRYCMS-TVDGMVWGERSKDDFNMLAQLQKIEAESKLQSLQARLDDMTEKYSRAIADQETVDSTPLREEQERAKQELARAARAHSGIVSALEVTLAAEKSHCQDLRLKLERQTREHQVALADVDQRLLQTQXXXXXXXXXXXXXXXXXDRECARRARLDKKYSELEDRGLVSPRSV 831          
BLAST of mRNA_S-dermatodea_contig8157.16355.1 vs. uniprot
Match: D7G4R8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4R8_ECTSI)

HSP 1 Score: 290 bits (741), Expect = 5.520e-83
Identity = 232/508 (45.67%), Postives = 277/508 (54.53%), Query Frame = 0
Query:    1 MELLLEEEGKDSAAAIKELRDKAVLAKGRLSTEVEGLKSANVQLTQAVAAAKAESSEFRHQAETALKCKQADASGAAAREEVLRADVEQARARADTMSQSLAEAIREQSGLVAETANAKATAEVLEAKIRAAELERAQATGREAERCQALTNQCTPSTVPGPGWRGDLSDSFGDGMEKLLADKLEDASKHISQLRIMLRQEVGRREVAEAEVSEAQGYLNSSRQELGELRHLAWKLEQMGRNSITHIDEKNQAIKQLEEQLQYRGVGAPVGEREG--GLAGKSRRRSGRKIATLGGREGDREERRGREGEERMPRRRTAGDTESEEFYTGNRSTESGERTASRRECVKNFSGNRNKTQRNLAGKETHKTLLRALSGLRSDLQGVNDQLEEAKAENEGIGRRFAEGVAMRAERLVHALQQAGREKIEPQRQASEAQAEAAKDRESAAELTRVVQGISRILLDNLGVAIPNGLGDRDVVGEEIEGV-FEKRLSELSAAVSGAMCRLEERA 505
            ME L+E E KD AAAIK LRDKA+LAK RLSTEVE L+  N  L + +A A+A  SE   + + ALK K+ DA+ AAAREE LRA  EQAR RADTMSQSLAEAIREQSGL+ ETANAK  AEVLEAK RAAE+                                          E +LA+KL++AS HIS+LR +LRQEV RRE AEAEVSEAQGYL SSRQELGELRHLAWKLEQMGRNS  H+D  +QA+  LE +L  RGV   VG  E   G   +  R+ GR + + G   G  E                           G    E+G   A RR   +  S          + K   +  L AL+GLR++L+ VN QL +AKAENE   R   E VA+R ERL  A                  +A  A DR+SA  L RVV+GIS ILLD LGVA+P  L   + VGE  EG     RL ++   +    C +  RA
Sbjct:  260 MESLMEGEAKDCAAAIKNLRDKALLAKERLSTEVERLRGDNGHLRKGIAVAEARGSELELRLQAALKSKETDATAAAAREEALRATAEQARTRADTMSQSLAEAIREQSGLLTETANAKVAAEVLEAKSRAAEV------------------------------------------ENMLAEKLQEASTHISELRTVLRQEVRRREAAEAEVSEAQGYLKSSRQELGELRHLAWKLEQMGRNSFAHMDGNSQAVSHLEGELHARGVAGTVGGEEARRGANREEERKHGRSLPSGGWARGRSE---------------------------GGGKEEAGLLCARRRSVPQALS----------SWKGGQRLFLAALAGLRAELRCVNTQLGKAKAENEEFVRHCTERVAVRVERLERAXXXXXXXXXXXXXXXXXXEAAGATDRKSADTLKRVVKGISSILLDRLGVAMPTCLDGGEDVGERGEGKGVALRLYDIRLFIMYPSCLMLRRA 688          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig8157.16355.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KLZ7_9PHAE3.140e-10742.06Reverse transcriptase domain-containing protein n=... [more]
D7G4R8_ECTSI5.520e-8345.67Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 34..54
NoneNo IPR availableCOILSCoilCoilcoord: 87..107
NoneNo IPR availableCOILSCoilCoilcoord: 115..142
NoneNo IPR availableCOILSCoilCoilcoord: 614..694
NoneNo IPR availableCOILSCoilCoilcoord: 372..399
NoneNo IPR availablePANTHERPTHR34491FAMILY NOT NAMEDcoord: 27..693

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig8157contigS-dermatodea_contig8157:2140..9113 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig8157.16355.1mRNA_S-dermatodea_contig8157.16355.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig8157 1552..9143 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig8157.16355.1 ID=prot_S-dermatodea_contig8157.16355.1|Name=mRNA_S-dermatodea_contig8157.16355.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=785bp
MELLLEEEGKDSAAAIKELRDKAVLAKGRLSTEVEGLKSANVQLTQAVAA
AKAESSEFRHQAETALKCKQADASGAAAREEVLRADVEQARARADTMSQS
LAEAIREQSGLVAETANAKATAEVLEAKIRAAELERAQATGREAERCQAL
TNQCTPSTVPGPGWRGDLSDSFGDGMEKLLADKLEDASKHISQLRIMLRQ
EVGRREVAEAEVSEAQGYLNSSRQELGELRHLAWKLEQMGRNSITHIDEK
NQAIKQLEEQLQYRGVGAPVGEREGGLAGKSRRRSGRKIATLGGREGDRE
ERRGREGEERMPRRRTAGDTESEEFYTGNRSTESGERTASRRECVKNFSG
NRNKTQRNLAGKETHKTLLRALSGLRSDLQGVNDQLEEAKAENEGIGRRF
AEGVAMRAERLVHALQQAGREKIEPQRQASEAQAEAAKDRESAAELTRVV
QGISRILLDNLGVAIPNGLGDRDVVGEEIEGVFEKRLSELSAAVSGAMCR
LEERAKHALLGQLPSVPLNVESSTSAGRQDRALTIDGMIWGDRSKEDFNM
LAQLQKIEVESELQWLRARLGEMTDKYSRAVAERDNVDSAPSQEAREHAQ
EEAARAADAHASAIAALEATLAVEKSRCQDLRVRLERKTREHQVELTEAD
KKLQNKEHELDKVQQALEQTQFTLGRESARRARLEKKYSEMEERGLVSPR
SVTPRVVRSHARARNRDDMSTTPVVQPSLLRVASARGVLEEARAKLGRES
GDDGVLAQGSVGDMAPVSGRDEAAVKNRDKITDS*
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