prot_S-dermatodea_contig81510.16352.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig81510.16352.1
Unique Nameprot_S-dermatodea_contig81510.16352.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length43
Homology
BLAST of mRNA_S-dermatodea_contig81510.16352.1 vs. uniprot
Match: A0A2I4CWC1_9TELE (crooked neck-like protein 1 n=1 Tax=Austrofundulus limnaeus TaxID=52670 RepID=A0A2I4CWC1_9TELE)

HSP 1 Score: 58.5 bits (140), Expect = 7.830e-10
Identity = 24/42 (57.14%), Postives = 32/42 (76.19%), Query Frame = 0
Query:    1 MLGNSAKARAIFERWMEWEPEDNAWSAYVKFEMRQEQPAQAR 42
            MLGN A  R +FERWMEWEPE+ AW +Y+ FE+R ++  +AR
Sbjct:   38 MLGNVAGCRQVFERWMEWEPEEQAWHSYINFELRYKEVDKAR 79          
BLAST of mRNA_S-dermatodea_contig81510.16352.1 vs. uniprot
Match: UPI000719E0EE (crooked neck-like protein 1 n=1 Tax=Priapulus caudatus TaxID=37621 RepID=UPI000719E0EE)

HSP 1 Score: 60.5 bits (145), Expect = 1.590e-9
Identity = 24/34 (70.59%), Postives = 28/34 (82.35%), Query Frame = 0
Query:    1 MLGNSAKARAIFERWMEWEPEDNAWSAYVKFEMR 34
            MLGN A AR +FERWMEWEPE+ AW  Y+KFE+R
Sbjct:   36 MLGNVAGARQVFERWMEWEPEEQAWQTYIKFELR 69          
BLAST of mRNA_S-dermatodea_contig81510.16352.1 vs. uniprot
Match: Q4SD16_TETNG ((spotted green pufferfish) hypothetical protein n=1 Tax=Tetraodon nigroviridis TaxID=99883 RepID=Q4SD16_TETNG)

HSP 1 Score: 58.9 bits (141), Expect = 5.560e-9
Identity = 24/42 (57.14%), Postives = 32/42 (76.19%), Query Frame = 0
Query:    1 MLGNSAKARAIFERWMEWEPEDNAWSAYVKFEMRQEQPAQAR 42
            MLGN A  R +FERWMEWEPE+ AW +Y+ FE+R ++  +AR
Sbjct:  207 MLGNPAGCRQVFERWMEWEPEEQAWHSYINFELRYKEVDKAR 248          
BLAST of mRNA_S-dermatodea_contig81510.16352.1 vs. uniprot
Match: A0A4Z2BQ93_9TELE (Uncharacterized protein n=2 Tax=Takifugu TaxID=31032 RepID=A0A4Z2BQ93_9TELE)

HSP 1 Score: 58.9 bits (141), Expect = 5.560e-9
Identity = 24/42 (57.14%), Postives = 32/42 (76.19%), Query Frame = 0
Query:    1 MLGNSAKARAIFERWMEWEPEDNAWSAYVKFEMRQEQPAQAR 42
            MLGN A  R +FERWMEWEPE+ AW +Y+ FE+R ++  +AR
Sbjct:  188 MLGNPAGCRQVFERWMEWEPEEQAWHSYINFELRYKEVDKAR 229          
BLAST of mRNA_S-dermatodea_contig81510.16352.1 vs. uniprot
Match: H3CZE3_TETNG (Crooked neck pre-mRNA splicing factor 1 n=1 Tax=Tetraodon nigroviridis TaxID=99883 RepID=H3CZE3_TETNG)

HSP 1 Score: 58.9 bits (141), Expect = 5.570e-9
Identity = 24/42 (57.14%), Postives = 32/42 (76.19%), Query Frame = 0
Query:    1 MLGNSAKARAIFERWMEWEPEDNAWSAYVKFEMRQEQPAQAR 42
            MLGN A  R +FERWMEWEPE+ AW +Y+ FE+R ++  +AR
Sbjct:  161 MLGNPAGCRQVFERWMEWEPEEQAWHSYINFELRYKEVDKAR 202          
BLAST of mRNA_S-dermatodea_contig81510.16352.1 vs. uniprot
Match: A0A3Q3JGZ9_MONAL (Crooked neck pre-mRNA splicing factor 1 n=1 Tax=Monopterus albus TaxID=43700 RepID=A0A3Q3JGZ9_MONAL)

HSP 1 Score: 58.5 bits (140), Expect = 7.610e-9
Identity = 24/42 (57.14%), Postives = 32/42 (76.19%), Query Frame = 0
Query:    1 MLGNSAKARAIFERWMEWEPEDNAWSAYVKFEMRQEQPAQAR 42
            MLGN A  R +FERWMEWEPE+ AW +Y+ FE+R ++  +AR
Sbjct:  163 MLGNVAGCRQVFERWMEWEPEEQAWHSYINFELRYKEVDKAR 204          
BLAST of mRNA_S-dermatodea_contig81510.16352.1 vs. uniprot
Match: A0A183KDF0_9TREM (Uncharacterized protein n=1 Tax=Schistosoma curassoni TaxID=6186 RepID=A0A183KDF0_9TREM)

HSP 1 Score: 58.5 bits (140), Expect = 7.610e-9
Identity = 25/41 (60.98%), Postives = 32/41 (78.05%), Query Frame = 0
Query:    2 LGNSAKARAIFERWMEWEPEDNAWSAYVKFEMRQEQPAQAR 42
            LGN A AR IFERWMEW+PE+ AW AY+ FE+R ++  +AR
Sbjct:   39 LGNVAGARQIFERWMEWQPEEQAWHAYINFELRYKEMDRAR 79          
BLAST of mRNA_S-dermatodea_contig81510.16352.1 vs. uniprot
Match: A0A444UJK5_ACIRT (Ral GTPase-activating protein subunit alpha-2 n=1 Tax=Acipenser ruthenus TaxID=7906 RepID=A0A444UJK5_ACIRT)

HSP 1 Score: 57.8 bits (138), Expect = 1.420e-8
Identity = 23/42 (54.76%), Postives = 32/42 (76.19%), Query Frame = 0
Query:    1 MLGNSAKARAIFERWMEWEPEDNAWSAYVKFEMRQEQPAQAR 42
            MLGN A  R +FERWMEW+PE+ AW +Y+ FE+R ++  +AR
Sbjct: 1713 MLGNIAGCRLVFERWMEWQPEEQAWHSYINFELRYKEVEKAR 1754          
BLAST of mRNA_S-dermatodea_contig81510.16352.1 vs. uniprot
Match: A0A444TWW0_ACIRT (Crooked neck-like protein 1 n=5 Tax=Acipenseroidei TaxID=186622 RepID=A0A444TWW0_ACIRT)

HSP 1 Score: 57.8 bits (138), Expect = 1.420e-8
Identity = 23/42 (54.76%), Postives = 32/42 (76.19%), Query Frame = 0
Query:    1 MLGNSAKARAIFERWMEWEPEDNAWSAYVKFEMRQEQPAQAR 42
            MLGN A  R +FERWMEW+PE+ AW +Y+ FE+R ++  +AR
Sbjct:  160 MLGNIAGCRLVFERWMEWQPEEQAWHSYINFELRYKEVEKAR 201          
BLAST of mRNA_S-dermatodea_contig81510.16352.1 vs. uniprot
Match: A0A835TZ36_9PASS (Uncharacterized protein n=1 Tax=Lamprotornis superbus TaxID=245042 RepID=A0A835TZ36_9PASS)

HSP 1 Score: 56.2 bits (134), Expect = 1.830e-8
Identity = 21/34 (61.76%), Postives = 28/34 (82.35%), Query Frame = 0
Query:    1 MLGNSAKARAIFERWMEWEPEDNAWSAYVKFEMR 34
            MLGN A +R +FERWMEW+PE+ AW +Y+ FE+R
Sbjct:    4 MLGNVAGSRQVFERWMEWQPEEQAWHSYINFELR 37          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig81510.16352.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2I4CWC1_9TELE7.830e-1057.14crooked neck-like protein 1 n=1 Tax=Austrofundulus... [more]
UPI000719E0EE1.590e-970.59crooked neck-like protein 1 n=1 Tax=Priapulus caud... [more]
Q4SD16_TETNG5.560e-957.14(spotted green pufferfish) hypothetical protein n=... [more]
A0A4Z2BQ93_9TELE5.560e-957.14Uncharacterized protein n=2 Tax=Takifugu TaxID=310... [more]
H3CZE3_TETNG5.570e-957.14Crooked neck pre-mRNA splicing factor 1 n=1 Tax=Te... [more]
A0A3Q3JGZ9_MONAL7.610e-957.14Crooked neck pre-mRNA splicing factor 1 n=1 Tax=Mo... [more]
A0A183KDF0_9TREM7.610e-960.98Uncharacterized protein n=1 Tax=Schistosoma curass... [more]
A0A444UJK5_ACIRT1.420e-854.76Ral GTPase-activating protein subunit alpha-2 n=1 ... [more]
A0A444TWW0_ACIRT1.420e-854.76Crooked neck-like protein 1 n=5 Tax=Acipenseroidei... [more]
A0A835TZ36_9PASS1.830e-861.76Uncharacterized protein n=1 Tax=Lamprotornis super... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003107HAT (Half-A-TPR) repeatSMARTSM00386hat_new_1coord: 3..34
e-value: 2.6E-4
score: 30.3
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 1..42
e-value: 7.1E-8
score: 34.0
NoneNo IPR availablePANTHERPTHR11246PRE-MRNA SPLICING FACTORcoord: 1..42
NoneNo IPR availablePANTHERPTHR11246:SF3CROOKED NECK-LIKE PROTEIN 1coord: 1..42

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig81510contigS-dermatodea_contig81510:202..330 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig81510.16352.1mRNA_S-dermatodea_contig81510.16352.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig81510 202..336 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig81510.16352.1 ID=prot_S-dermatodea_contig81510.16352.1|Name=mRNA_S-dermatodea_contig81510.16352.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=43bp
MLGNSAKARAIFERWMEWEPEDNAWSAYVKFEMRQEQPAQAR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003107HAT
IPR011990TPR-like_helical_dom_sf