mRNA_S-dermatodea_contig8128.16328.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig8128.16328.1 vs. uniprot
Match: D7G2H0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2H0_ECTSI) HSP 1 Score: 436 bits (1120), Expect = 3.990e-152 Identity = 216/300 (72.00%), Postives = 246/300 (82.00%), Query Frame = 2
Query: 38 MDIAVDVLTQNWEYGPEVCLAAFALFHAAR----------------------------VRKIEKDSGKQLFWAESLVLTFFMAFGGGILAPFLLGKPPVMFVNDLLVPVVSVCWFVSNRAEGPIFALINMSVMKQVILVLAEVFRANAMCGVVVLAHSILKAGKHYPIAVWGPVLLGTIAGCGGIFLPLDKGLQGLKKGAPWPLQSAFYGSVFFNFFVYDPIVGPYMRDAAAYALTGDIVVQGKVLVAAFFCVCAVAQTILGPSFNPFTPLHNVVYTVTGVPNPAAIAAAAAATEKPKED 853
M+ AVD LTQNWEYG EVCLAAFALFH+AR VRKIEKDSGKQ+FWAESLV+T+ MAFGGGILAPFLLGKPPVMFVNDL+VP+V+VCWFVSNRAEGPIFALIN +MKQVILVL+EVFRAN+MCG+VVL++SILK GKHYPIA+WGP+LLGT+ GCGG+FLPLDKGL+GLK GAPWPLQSAFYGS+FFN FVYDP VGPY+RDAAA L GD+VVQG+ +VA F CV A+AQT++ P+FNPFTP+HNVVYTVTGVPNP A+A A EKPK D
Sbjct: 1 MENAVDFLTQNWEYGAEVCLAAFALFHSAREIKQACDALRLACAGSGALTFKQKAKILVRKIEKDSGKQMFWAESLVMTYMMAFGGGILAPFLLGKPPVMFVNDLIVPLVAVCWFVSNRAEGPIFALINTPIMKQVILVLSEVFRANSMCGIVVLSNSILKPGKHYPIALWGPILLGTVGGCGGLFLPLDKGLKGLKNGAPWPLQSAFYGSMFFNLFVYDPNVGPYLRDAAALFLDGDLVVQGRAIVAGFLCVVALAQTLISPAFNPFTPVHNVVYTVTGVPNPEAVAVATG--EKPKAD 298
BLAST of mRNA_S-dermatodea_contig8128.16328.1 vs. uniprot
Match: A0A835Z0I7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0I7_9STRA) HSP 1 Score: 260 bits (664), Expect = 5.070e-83 Identity = 141/269 (52.42%), Postives = 171/269 (63.57%), Query Frame = 2
Query: 35 AMDIAVDVLTQNWEYGPEVCLAAFALFHAARVRKIEKDSGKQLFWAESLVLTFFMAFGGGILAPFLLGKPPVMFVNDLLVPVVSVCWFVSNRAEGPIFALINMSVMKQVILVLAEVFRANAMCGVVVLAHSILKAGKHYPIAVWGPVLLGTIAGCGGIFLPLDKGLQGLKKGAPWPLQSAFYGSVFFNFFVYDPIV----GPYMRDAAAYALTGDIVVQGKVLVAAFFCVCAVAQTILGPSFNPFTPLHNVVYTVTGVPNPAAIAAAAA 829
++D A D L Q+ Y PEVCL +AL AARV+ K ++WA+SLVLTF M FGGGI+APFLLGKPPV+ +NDLLV V W V NR E P+ AL+ V+ Q + +AEVFRAN C +V +A + AGK+YPI WGPVLLGTIAGC G+FLP DKGL +K G+PWPLQSAFYGS+ F+ +DP V PY D A A + V AFF A QT GP FNPF+PLH V Y ++GV P A A AA
Sbjct: 6 SLDTAHDFLLQDLPYMPEVCLFIYALVGAARVKS---GPAKNMYWAQSLVLTFLMCFGGGIVAPFLLGKPPVILINDLLVVAVLGSWLVVNRLEEPVGALLRAPVISQALAFMAEVFRANGFCRMVQVAFKEIPAGKYYPIPFWGPVLLGTIAGCAGMFLPFDKGLASIKGGSPWPLQSAFYGSLAFHLLAHDPHVRAALAPYAGDYTADA--------ARACVVAFFAAVATLQTYAGPHFNPFSPLHRVAYAISGVKAPGANGAPAA 263
BLAST of mRNA_S-dermatodea_contig8128.16328.1 vs. uniprot
Match: A0A4D9CX56_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CX56_9STRA) HSP 1 Score: 157 bits (398), Expect = 2.300e-41 Identity = 93/254 (36.61%), Postives = 138/254 (54.33%), Query Frame = 2
Query: 41 DIAVDVLTQNWEYGPEVCLAAFALFHAARVRKIEKDSGKQLFWAESLVLTFFMAFGGGILAPFLLGKPPVMFVNDLLVPVVSVCWFVSNRAEGPIFALINMSVMKQVILVLAEVFRANAMCGVVVLAHSILKAGKHYPIAVWGPVLLGTIAGCGGIFLPLDKGLQGLKKGAPWPLQSAFYGSVFFNFFVYDPIV-GPYMRDAAAYALTGDIVVQGKVLVAAFFCVCAVAQTILGPSFNPFTPLHNVVYTVTGVP 799
++A L + Y EVCL AF L + RVR + S W LVL F F GG + P G+ PV+FVNDLLVP+V + W++ + + L+ S K +++ L E++RA ++ V A + + G +YPIAV GPVL+GT++G G F+P D+G+ L G P LQ+ +F++ +DP + G Y+R A L+ K L FF A + GP +NPFTP+H ++Y V G+P
Sbjct: 16 EVARKFLLMQYPYEFEVCLFAFCLGASMRVRPSAQYS-----WLHHLVLVFLTGFAGGTIIPMFFGRTPVLFVNDLLVPLVCLSWYLVHYTR--VGGLLQTSPCKFLLVALFEIYRAASILKTVGQAATDIAPGPYYPIAVVGPVLVGTLSGSMGAFMPPDRGISFLATGVPLNLQTTLLACLFYHLAAHDPALPGAYLRGLPALRLSDPE--NLKALTVFFFVAMAFLSLVKGPDYNPFTPVHTLLYQVLGIP 260
BLAST of mRNA_S-dermatodea_contig8128.16328.1 vs. uniprot
Match: A0A7S2SKA8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SKA8_9STRA) HSP 1 Score: 149 bits (376), Expect = 2.640e-39 Identity = 86/267 (32.21%), Postives = 135/267 (50.56%), Query Frame = 2
Query: 14 AKKPMRDAMDIAVDVLTQNWEYGPEVCLAAFALFHAARVRKIEKDSGKQLFWAESLVLTFFMAFGGGILAPFLLGKPPVMFVNDLLVPVVSVCWFVSNRAEGPI--FALINMSVMKQVILVLAEVFRANAMCGVVVLAHSILKAGKHYPIAVWGPVLLGTIAGCGGIFLPLDKGLQGLKKGAPWPLQSAFYGSVFFNFFVYDPIVGPYMRDAAAYALTGDIVVQGKVLVAAFFCVCAVAQTILGPSFNPFTPLHNVVYTVTGVPNPA 808
A +P D+ V VL Y E L F + A + R+ E+ ++ FW SLV T +GGGI+ P +LG P ND + +V W+ + P+ + L N +V++ + + E R N + ++A+S+L HYPI +WGP+L G I+GC G F+ GL ++ W +QS+FY + +++ V DPIVGP + D +V + A V + + G FNPF P+H+++Y +TG NPA
Sbjct: 50 ALEPFWDSF--VVQVLALKRPYSLEFLLWGFTTWMAYKFRRQERVQAERYFWLNSLVRTAIACYGGGIIVPMMLGMKPFPIENDAAITLVLFSWWTLHGTPAPLVTWVLDNSTVLRCFLFFIFEALRCNVVVKWCIIANSMLAPSVHYPIPIWGPILCGGISGCFGGFILGGVGL--VQSEVSWLIQSSFYAAAYYHITVNDPIVGPILGKLHISGAGSDPLVARMTCIFALGAVAVLQEAFFGAHFNPFAPVHHLLYKITGAHNPA 312
BLAST of mRNA_S-dermatodea_contig8128.16328.1 vs. uniprot
Match: A0A6H5JUV5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUV5_9PHAE) HSP 1 Score: 115 bits (288), Expect = 6.570e-26 Identity = 80/258 (31.01%), Postives = 122/258 (47.29%), Query Frame = 2
Query: 56 VLTQNWEYGPEVCLAAFALFHAARVRKIEKDSGKQLFWAESLVLTFFMAFGGGILAPFLLGKPPVMFVNDLLVPVVSVCWFVSNRAEGPIFALINMSVMKQVILVLAEVFRANAMCGVVVLAHSILKAGKHYPIAVWGPVLLGTIAGCGGIFLPLDKGLQGLKKGAPWPLQSAFYGSVFFNFFVYDP-IVGPYMRDAAAY--ALTGDIVVQGKVLVAAFFCVCAVAQTILGPSFNPFTPLHNV----VYTVTGVPNPA 808
++ W Y E L F+L +A V+ K + + V T G G++ P L+ PP+ NDLLV + V + VS + + I + + + +L+ R N +C +V A + +YPIA++GP+++G G GG +P DKGL + K PW +Q F + F++ D I+G +R A A DI +++ F V V QT P FNPFTP H +Y VTG+P A
Sbjct: 12 IVLLKWPYSSEFYL--FSLVTSACVKARGKSTKFEGLLLPMFVHTLMCTTGSGVVGPLLMRDPPLFLNNDLLVTCIMVFFLVSVVFDPYVVNFIKTPHLWKAMALLSTTSRMNKICFIVDYALTKFPPSPYYPIALFGPIMIGLARGIGGSLVPADKGLSSISKDLPWAVQLCFSVATFYHIVANDTYILGGMVRGALGLENATREDI----RLIAVTFGVVVTVIQTYYAPKFNPFTPAHQATSPALYAVTGMPKTA 263
BLAST of mRNA_S-dermatodea_contig8128.16328.1 vs. uniprot
Match: D7FML9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FML9_ECTSI) HSP 1 Score: 105 bits (262), Expect = 2.540e-22 Identity = 65/192 (33.85%), Postives = 97/192 (50.52%), Query Frame = 2
Query: 242 PPVMFVNDLLVPVVSVCWFVSNRAEGPIFALINMSVMKQVILVLAEVFRANAMCGVVVLAHSILKAGKHYPIAVWGPVLLGTIAGCGGIFLPLDKGLQGLKKGAPWPLQSAFYGSVFFNFFVYDP-IVGPYMRDAAAY--ALTGDIVVQGKVLVAAFFCVCAVAQTILGPSFNPFTPLHNVVYTVTGVPNPA 808
PP+ NDLLV + V + S + + I + + + +L+ R N +C +V A + +YPIA++GP+++G G GG +P DKGL + K PW +Q F + F++ D I+G +R A A DI +++ F V V QT P FNPFTP H +YTVTG+P A
Sbjct: 4 PPLFLNNDLLVTCIMVFFLFSVVFDPYVVNFIKTPHLWKAMALLSTTSRMNKICFIVDYALTKFPPSPYYPIALFGPIMIGLARGIGGSLVPADKGLSSISKDLPWAVQLCFSVATFYHVVANDTYILGGMVRGALGLENATREDI----RLIAVTFGVVVTVIQTYYAPKFNPFTPAHQALYTVTGMPKTA 191
BLAST of mRNA_S-dermatodea_contig8128.16328.1 vs. uniprot
Match: A0A7S1BM49_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BM49_9STRA) HSP 1 Score: 90.1 bits (222), Expect = 1.520e-17 Identity = 68/208 (32.69%), Postives = 105/208 (50.48%), Query Frame = 2
Query: 92 CLAAFALFHAARVRKIEKDSGKQLFWAESLVLTFFMAFGGGILAPFLLGKPPVMFVNDLLVPVVSVCWFVSNRAEGPIFA-LINMSVMKQVIL-VLAEVFRANAMCGVVVLA-HSILKAGKHYPIAVWGPVLLGTIAGCGGIFLPLDKGLQGLKKGAPWPLQSAFYGSVFFNFFVYDPIVGPYMRDAAAYALTGDIVVQGKVLVAAFF 706
CL A+A H +V K +F SL L GGGIL P L PV +D+ + + + + + +R PI L + ++ Q+IL VL E RA +C A +IL + YP+ +GP++ GT++GCGG F+PL KGL+ + G P P ++A G+ ++ FV + + D +G+VLVA+FF
Sbjct: 56 CLLAYAFVHGVKVFKSVNPKASPVFKLLSLTLA---CTGGGILVPIFLNSIPVPLASDVYIVAILISFALHSRF--PILRELFSKNIALQLILIVLYETTRAGVVCKFTKKAGETILASWLPYPL--FGPIMCGTVSGCGGAFMPLSKGLEPTRAGMPKPAKTALIGAAAYHLFVNTKLTDGVI----------DAPQKGQVLVASFF 246
BLAST of mRNA_S-dermatodea_contig8128.16328.1 vs. uniprot
Match: A0A6T1L8M4_9DINO (Hypothetical protein n=4 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A6T1L8M4_9DINO) HSP 1 Score: 89.4 bits (220), Expect = 3.740e-17 Identity = 60/189 (31.75%), Postives = 97/189 (51.32%), Query Frame = 2
Query: 62 TQNWEYGPEVCLAAFALFHAARVRKIEKDSGKQLFWAESLVLTFFMAFGGGILAPFLLGKPPVMFVNDLLVPVVSVCWFVSNRAEGPIFALINMSVMKQ---VILVLAEVFRANAMCGVVVLA------HSILKAGKHYPIAVWGPVLLGTIAGCGGIFLPLDKGLQGLKKGAPWPLQSAFYGSVFFNF 601
T W + EV +A F L A VR E+ +G LFW ++LV T AFGGG LAP ++ PV + ++ V W+V++ A ++ K V+ VL +F+ + G + LA ++ +++ + P+L G + GCGG FLP DKGL+ + +G WP+ +AF+ + + F
Sbjct: 48 TAPWVW--EVTVAGFMLKVAQDVR--EQVAG--LFWPKALVTTGIAAFGGGFLAPLVVAHCPVPLREETFFWILVVAWYVTHHVPYLSAAWCEIATAKPGKTVLTVLFCIFKTQQIVGSIELAAKAVDHEPLMPHSRYFFVPCAAPLLCGFLGGCGGAFLPFDKGLRPISEGKAWPVSAAFFTTAIYYF 230
BLAST of mRNA_S-dermatodea_contig8128.16328.1 vs. uniprot
Match: A0A7S1VWR2_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S1VWR2_9STRA) HSP 1 Score: 85.9 bits (211), Expect = 3.660e-16 Identity = 54/174 (31.03%), Postives = 89/174 (51.15%), Query Frame = 2
Query: 89 VCLAAFALFHAARVRKIEKDSGKQLFWAESLVLTFFMAFGGGILAPFLLGKPPVMFVNDLLVPVVSVCWFVSNRAEGPIFALINMS-VMKQVILVLAEVFRANAMCGVVVLAHSILKAGKHYPIAVWGPVLLGTIAGCGGIFLPLDKGLQGLKKGAPWPLQSAFYGSVFFNFFV 607
+C+ + H ++V K + + S++L GGGIL P L K PV ND P+ + F + + ++N+S V+K +++V E+ RA + LA S A + ++GP++ GT+AGCGG FLP++KGL + G P+ SAF G+ + F+
Sbjct: 37 MCMLGYTFLHGSKVFKAVPKTASVSYKLISMILA---CTGGGILVPIFLNKVPVPLANDAY-PIAILTSFAIHYYFPVVAEVMNLSPVVKSLVVVFYELIRAKVVL-TFTLAASAAIAPTTFSFPLFGPIMCGTVAGCGGAFLPMNKGLDPITSGLQPPMSSAFVGATLVHLFL 205
BLAST of mRNA_S-dermatodea_contig8128.16328.1 vs. uniprot
Match: A0A7S1RES9_ALECA (Hypothetical protein n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1RES9_ALECA) HSP 1 Score: 87.0 bits (214), Expect = 4.000e-16 Identity = 49/170 (28.82%), Postives = 91/170 (53.53%), Query Frame = 2
Query: 134 KIEKDSGKQL---FWAESLVLTFFMAFGGGILAPFLLGKPPVMFVNDLLVPVVSVCWFVSNRAEGPIFALINMSVMKQ-----VILVLAEVFRANAMCGVVVLA------HSILKAGKHYPIAVWGPVLLGTIAGCGGIFLPLDKGLQGLKKGAPWPLQSAFYGSVFFNF 601
K+ +D +Q+ FW ++LV T AFGGG LAP ++ PV + + W+V++ P+ ++ + K V+ +L +F+ + G + LA ++ +++ + + GP++ G + GCGG FLP DKGL+ +++G WP+ +AF+ +V + F
Sbjct: 95 KVAQDVREQVVNFFWPKALVTTAIAAFGGGFLAPLIVAHCPVPLREETFFWFLVFAWYVTHHV--PVVSVTWCEIAKSKAGWTVLTILFGIFKTQQIVGSIELAAKAVDHEPLMPHSRYFFVPMAGPLVCGFLGGCGGAFLPFDKGLRPIEEGKQWPVSAAFFATVIYYF 262 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig8128.16328.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig8128.16328.1 >prot_S-dermatodea_contig8128.16328.1 ID=prot_S-dermatodea_contig8128.16328.1|Name=mRNA_S-dermatodea_contig8128.16328.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=174bp HQDNSQEAYEGRHGHRRRRIDSELGVWTGGLPGGVRALPCRKGEEDREGQback to top mRNA from alignment at S-dermatodea_contig8128:140..8533- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig8128.16328.1 ID=mRNA_S-dermatodea_contig8128.16328.1|Name=mRNA_S-dermatodea_contig8128.16328.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=8394bp|location=Sequence derived from alignment at S-dermatodea_contig8128:140..8533- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig8128:140..8533- >mRNA_S-dermatodea_contig8128.16328.1 ID=mRNA_S-dermatodea_contig8128.16328.1|Name=mRNA_S-dermatodea_contig8128.16328.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1044bp|location=Sequence derived from alignment at S-dermatodea_contig8128:140..8533- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |