prot_S-dermatodea_contig8119.16319.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig8119.16319.1
Unique Nameprot_S-dermatodea_contig8119.16319.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length76
Homology
BLAST of mRNA_S-dermatodea_contig8119.16319.1 vs. uniprot
Match: D7FN35_ECTSI (Chorein N-terminal domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN35_ECTSI)

HSP 1 Score: 137 bits (345), Expect = 5.940e-36
Identity = 69/76 (90.79%), Postives = 74/76 (97.37%), Query Frame = 0
Query:    1 MFDDVISTGLQAVLTEIFEAVDKKQLNVSLVGDIFQESHLELTDLRLKKTLLKDLNLPVEIKEGLVGKLVIQGLSG 76
            MFDDVISTGLQAVL EIFE+VDK QLNVSLVGDIF+ESHLELTDLR+KKTLLKD+NLPVE+KEGLVGKLVIQGLSG
Sbjct:    1 MFDDVISTGLQAVLAEIFESVDKNQLNVSLVGDIFKESHLELTDLRIKKTLLKDMNLPVEVKEGLVGKLVIQGLSG 76          
BLAST of mRNA_S-dermatodea_contig8119.16319.1 vs. uniprot
Match: A0A7S3YME8_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YME8_HETAK)

HSP 1 Score: 70.5 bits (171), Expect = 4.240e-14
Identity = 33/75 (44.00%), Postives = 50/75 (66.67%), Query Frame = 0
Query:    1 MFDDVISTGLQAVLTEIFEAVDKKQLNVSLVGDIFQESHLELTDLRLKKTLLKDLNLPVEIKEGLVGKLVIQGLS 75
            MF  +    L+ +L EIFE VD+  L +S++GD+F ESH+EL+DL LK+ ++ DL  P  I    +GKL ++G+S
Sbjct:    1 MFSKLAFNQLKGILGEIFEDVDENTLEISMLGDLFSESHVELSDLYLKQDIINDLLPPFNITRAFIGKLSVRGIS 75          
BLAST of mRNA_S-dermatodea_contig8119.16319.1 vs. uniprot
Match: A0A1V9YW84_9STRA (USP domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9YW84_9STRA)

HSP 1 Score: 59.3 bits (142), Expect = 1.710e-8
Identity = 27/63 (42.86%), Postives = 44/63 (69.84%), Query Frame = 0
Query:   14 LTEIFEAVDKKQLNVSLVGDIFQESHLELTDLRLKKTLLKDLNLPVEIKEGLVGKLVIQGLSG 76
            L E+FEA+D+  + +S++GD+F ESHL L DL +K ++   L  P+E+  G +G+L ++GL G
Sbjct: 1489 LHEVFEALDEDAVEISVLGDLFDESHLRLEDLFVKPSVFNMLPYPIELVTGYLGQLNVEGLLG 1551          
BLAST of mRNA_S-dermatodea_contig8119.16319.1 vs. uniprot
Match: A0A1V9ZSH0_9STRA (Helicase ATP-binding domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZSH0_9STRA)

HSP 1 Score: 55.8 bits (133), Expect = 2.840e-7
Identity = 26/64 (40.62%), Postives = 43/64 (67.19%), Query Frame = 0
Query:   13 VLTEIFEAVDKKQLNVSLVGDIFQESHLELTDLRLKKTLLKDLNLPVEIKEGLVGKLVIQGLSG 76
            +L E+FE VD+  ++VS++GD+F +SHL L  L LK+ +   L +P  +  G +G+L +QG+ G
Sbjct: 1223 LLQEVFEPVDEAGVDVSVLGDLFDDSHLRLEHLFLKRDVFNALPVPFALLTGYIGQLHVQGMLG 1286          
BLAST of mRNA_S-dermatodea_contig8119.16319.1 vs. uniprot
Match: UPI000719D127 (vacuolar protein sorting-associated protein 13A-like n=1 Tax=Priapulus caudatus TaxID=37621 RepID=UPI000719D127)

HSP 1 Score: 52.4 bits (124), Expect = 4.740e-6
Identity = 30/72 (41.67%), Postives = 44/72 (61.11%), Query Frame = 0
Query:    1 MFDDVISTGLQAVLTEIFEAVDKKQLNVSLV-GDIFQESHLELTDLRLKKTLLKDLNLPVEIKEGLVGKLVI 71
            MF+ V+++ L   L +  + +D + LNV +  GD+      EL DLRLK   L +LNLP+E+K G VGKL +
Sbjct:    1 MFEGVVASLLNKYLGKYIQDLDSENLNVGIFSGDV------ELYDLRLKPEALAELNLPIEVKAGFVGKLTL 66          
BLAST of mRNA_S-dermatodea_contig8119.16319.1 vs. uniprot
Match: UPI0007115531 (vacuolar protein sorting-associated protein n=1 Tax=Blastocystis sp. subtype 4 TaxID=944170 RepID=UPI0007115531)

HSP 1 Score: 52.4 bits (124), Expect = 4.780e-6
Identity = 28/73 (38.36%), Postives = 46/73 (63.01%), Query Frame = 0
Query:    1 MFDDVISTGLQAVLTEIFEAVDKKQLNVSL-VGDIFQESHLELTDLRLKKTLLKDLNLPVEIKEGLVGKLVIQ 72
            MF+D++S+ L   L +  E + K  L +SL  GD+      EL +LR+K   L +LN+P+++K+G VGKL ++
Sbjct:    1 MFEDLVSSLLSTYLGDYLEGLTKSDLKISLWKGDV------ELLNLRVKTEALDNLNIPIQVKDGFVGKLTLK 67          
BLAST of mRNA_S-dermatodea_contig8119.16319.1 vs. uniprot
Match: T0R0Q4_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0R0Q4_SAPDV)

HSP 1 Score: 51.6 bits (122), Expect = 8.700e-6
Identity = 22/64 (34.38%), Postives = 42/64 (65.62%), Query Frame = 0
Query:   13 VLTEIFEAVDKKQLNVSLVGDIFQESHLELTDLRLKKTLLKDLNLPVEIKEGLVGKLVIQGLSG 76
            +L E+FE +D+  ++VS++GD+F ESHL   +L +K  +   L  P +++   +G++ +QG+ G
Sbjct:   13 ILRELFEPLDEASVDVSVLGDLFDESHLRFENLFVKLDVFNTLPWPFKVQTAYIGQVHVQGMLG 76          
BLAST of mRNA_S-dermatodea_contig8119.16319.1 vs. uniprot
Match: A0A4P9XXR0_9FUNG (Uncharacterized protein n=1 Tax=Thamnocephalis sphaerospora TaxID=78915 RepID=A0A4P9XXR0_9FUNG)

HSP 1 Score: 51.6 bits (122), Expect = 8.930e-6
Identity = 27/72 (37.50%), Postives = 44/72 (61.11%), Query Frame = 0
Query:    1 MFDDVISTGLQAVLTEIFEAVDKKQLNVSLVGDIFQESHLELTDLRLKKTLLKDLNLPVEIKEGLVGKLVIQ 72
            MF+ V+ST L   L +  E  D  QL V + G       ++L +LRLKK+ L+  +LP+++KEG +G +V++
Sbjct:    1 MFESVVSTVLNKALGDFVEDFDPAQLRVGIWG-----GDVKLGNLRLKKSALEQFHLPIDVKEGYIGSVVLK 67          
BLAST of mRNA_S-dermatodea_contig8119.16319.1 vs. uniprot
Match: A0A067CBY3_SAPPC (VPS13 domain-containing protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067CBY3_SAPPC)

HSP 1 Score: 49.7 bits (117), Expect = 4.130e-5
Identity = 22/64 (34.38%), Postives = 41/64 (64.06%), Query Frame = 0
Query:   13 VLTEIFEAVDKKQLNVSLVGDIFQESHLELTDLRLKKTLLKDLNLPVEIKEGLVGKLVIQGLSG 76
            +L E+FE +D+  ++VS++GD+F ESHL    L +K  +   L  P +++   +G++ +QG+ G
Sbjct:   13 ILRELFEPLDEASVDVSVLGDLFDESHLRFEYLFVKLDVFNALPWPFKVQTAYIGQVHVQGMLG 76          
BLAST of mRNA_S-dermatodea_contig8119.16319.1 vs. uniprot
Match: A0A8K1CPC1_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CPC1_PYTOL)

HSP 1 Score: 49.7 bits (117), Expect = 4.190e-5
Identity = 27/72 (37.50%), Postives = 45/72 (62.50%), Query Frame = 0
Query:    5 VISTGLQAVLTEIFEAVDKKQLNVSLVGDIFQESHLELTDLRLKKTLLKDLNLPVEIKEGLVGKLVIQGLSG 76
            +I   LQ +L E FE V ++ +  SL GD+F  S L+L+D+ L+  L+  L+LP E++ G +G + ++G  G
Sbjct:    1 MIYETLQQLLGEFFENVQEENVFFSL-GDLFDPSKLQLSDVFLRTELINALHLPFELRVGYIGDVQVEGFVG 71          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig8119.16319.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 12
Match NameE-valueIdentityDescription
D7FN35_ECTSI5.940e-3690.79Chorein N-terminal domain-containing protein n=1 T... [more]
A0A7S3YME8_HETAK4.240e-1444.00Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A1V9YW84_9STRA1.710e-842.86USP domain-containing protein n=1 Tax=Thraustothec... [more]
A0A1V9ZSH0_9STRA2.840e-740.63Helicase ATP-binding domain-containing protein n=1... [more]
UPI000719D1274.740e-641.67vacuolar protein sorting-associated protein 13A-li... [more]
UPI00071155314.780e-638.36vacuolar protein sorting-associated protein n=1 Ta... [more]
T0R0Q4_SAPDV8.700e-634.38Uncharacterized protein n=1 Tax=Saprolegnia diclin... [more]
A0A4P9XXR0_9FUNG8.930e-637.50Uncharacterized protein n=1 Tax=Thamnocephalis sph... [more]
A0A067CBY3_SAPPC4.130e-534.38VPS13 domain-containing protein n=1 Tax=Saprolegni... [more]
A0A8K1CPC1_PYTOL4.190e-537.50Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR026854Vacuolar protein sorting-associated protein 13, N-terminal domainPFAMPF12624Chorein_Ncoord: 2..72
e-value: 9.7E-13
score: 48.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig8119contigS-dermatodea_contig8119:9113..9340 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig8119.16319.1mRNA_S-dermatodea_contig8119.16319.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig8119 8775..9340 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig8119.16319.1 ID=prot_S-dermatodea_contig8119.16319.1|Name=mRNA_S-dermatodea_contig8119.16319.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=76bp
MFDDVISTGLQAVLTEIFEAVDKKQLNVSLVGDIFQESHLELTDLRLKKT
LLKDLNLPVEIKEGLVGKLVIQGLSG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR026854VPS13_N