mRNA_S-dermatodea_contig8110.16308.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig8110.16308.1
Unique NamemRNA_S-dermatodea_contig8110.16308.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
[Close]
BLAST of mRNA_S-dermatodea_contig8110.16308.1 vs. uniprot
Match: D7FRP3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRP3_ECTSI)

HSP 1 Score: 613 bits (1580), Expect = 2.240e-198
Identity = 422/774 (54.52%), Postives = 478/774 (61.76%), Query Frame = 1 
Query:  418 DVESLQEQVALLKAAAGLSDEELTWRIETAKPEANAYRIASAALERAEATYERLLWRQGQLQIAHARLTGRGVGGDAATSAFAVAVARV------AGGATD--DRALSRLRSSAE--TEVRAAAERMARLAGAVSVTVRTGSEVDRVGVVSEVAADAGALASRAEATDRDLRALRRRVETAVGQVESWQQRRAEAPEFDAEEAAREEAWSKTNREANTAALKEMRALLPEASGDGGMFYPSDLCVRLRECRPLHWLVSAPEDIAGGNFLAGEGAAAFTQLEGMDVTEMRALWCVLPREFTRDPGGKKKEWRSRFRAQLEGLVRQQDGAVITAGWDPVRGRRATSRMPPLPPHRVRHPAYFYPTFEATRVRVERLQEQRRRLDSRRERLSALDLEMVEAKAEVDSACADARSAELRGRYGADTLRSARDAAKEALSTLVKERKGLVSSIAEAERMLSATYPSLAQLESEADSVAQILNR---------RRQPATDGSPT--------------HDGVGAVVTADAVIRVPGAFSAEPELRRRAAXXXKKLTPEEERALRASEVQRAVSSRDALSGPAAAAPASDETIEHSGDAGGTSAVSVAVAALSREGRSRGASGEAGGAPSLVVAAAEGPVLASAAGTSRTGPKI-------------------------APPPIKPMSKSLAALVARNNASRMP--GLAG----DGRDARESRKAASPSLGFLDELKARAKRKEAPAFGKGGQGSGSGTAAAPRAGVSFLDELKARTAVVS 2547
            DVESLQEQVALLKAAAGLSDEELTWR+ETAKPEANAYRIA+AALERAE TYERLLWRQGQL+ A ARL GRGVGGDAAT+AFA A ++V      A G  D   R LSRL+SS+E   EVRAAA  MA+LA AV  T+RTGSEVD   V +EV A+A  L   A+   R+L AL RRVE AVGQ+E+WQQR+A APEF AEEAAREEAWS+ NREA  A++   R     A+  GG+FYPSDLCVRL+ECRPLHWLVSAPEDIAG NFLAGEGAAAFTQLEGMD+TEMRA+W VLPREF RD  GKK EWR+RFR QLEGL RQQDGA++TAGWDPVR RRAT+RMPPLP HR R+PAYFYP+ EA   RV RL+EQRRR                           DARS ELR RYGADTLR AR+AAKEA S LV+E++ L++S+AEAE+MLS+ YP L QLE+EA+S+A IL+R          + P+  G                   GV A  T  AV RVPGAFSAEPELRRRA    +KLTPEEER LR  EVQRAVS+RD   G                  GG  A +   A                                                                       P  KPMSK+LAAL+AR  A R P  G AG    DG +    +KA SP LGFL ELKARA          G +  G   AA P  G SFLDELKARTA +S
Sbjct:  649 DVESLQEQVALLKAAAGLSDEELTWRMETAKPEANAYRIAAAALERAETTYERLLWRQGQLETARARLAGRGVGGDAATAAFATAASKVEAASPGALGQEDGGSRVLSRLKSSSEGVLEVRAAARAMAKLATAVLATLRTGSEVDYASVKAEVGAEAQRLRDLADGHGRELAALSRRVEAAVGQMEAWQQRKAGAPEFAAEEAAREEAWSEANREAG-ASVDGGRG----ATRVGGVFYPSDLCVRLKECRPLHWLVSAPEDIAGANFLAGEGAAAFTQLEGMDLTEMRAVWSVLPREFLRDGDGKKAEWRARFRVQLEGLARQQDGAIVTAGWDPVRRRRATARMPPLPAHRARNPAYFYPSVEAMASRVARLREQRRRXXXXXXXXXXXXXXXXXXXXXXXXXXXDARSGELRERYGADTLRGAREAAKEAHSVLVREKRRLLASVAEAEKMLSSAYPPLTQLEAEAESIAGILDRAATADADNNEKTPSKGGEIAATIPDSTSASAPIDRPGVAATATVGAV-RVPGAFSAEPELRRRAVAAARKLTPEEERRLRTGEVQRAVSARDVAGG-----------------VGGGQATTSGAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVAPSAKPMSKTLAALLARR-ADRPPPSGPAGGGGCDGDENEARKKATSPPLGFLGELKARAAXXXXXXXXXGPEREGK--AALPTGG-SFLDELKARTARIS 1395
[Close]
BLAST of mRNA_S-dermatodea_contig8110.16308.1 vs. uniprot
Match: A0A6H5JQI8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQI8_9PHAE)

HSP 1 Score: 287 bits (734), Expect = 9.230e-86
Identity = 181/334 (54.19%), Postives = 208/334 (62.28%), Query Frame = 1 
Query:  589 QGQLQIAHARLTGRGVGGDAATSAFAVAVARVAG------GATD--DRALSRLRSSAE-----------------------------TEVRAAAERMARLAGAVSVTVRTGSEVDRVGVVSEVAADAGALASRAEATDRDLRALRRRVETAVGQVESWQQRRAEAPEFDAEEAAREEAWSKTNREANTAALKEMRALLPEA-----SGD-------------------------GGMFYPSDLCVRLRECRPLHWLVSAPEDIAGGNFLAGEGAAAFTQLEGMDVTEMRALWCVLPREFTRDPGGKKKEWRSRFRAQLEGLVRQQDGAVITAGW 1389
            QGQL+ A ARL GRGVG DA T+AFA A+++V        G  D   R LS L+SS+E                              EVRAAA  MA+LA AV  T+RTGSEVD   V +EVAA+A  L   A+   R+L AL RRVE AVGQ+E+WQQR+AEAPEF AEE               + AL+EMRAL+PEA     +GD                         GG+FYPS+LCVRL+ECRPLHWLVSAPEDIAG NFLAGEGAAAFTQLEGMD+TEMRA+W VLPREF RD  GKK EWR+RFR QLEGL RQQDGAV+TAGW
Sbjct:   28 QGQLETARARLAGRGVGVDAVTAAFATAMSKVVAASPGVLGREDGGSRVLSLLKSSSEGVLEALQEPRAAAGAVAATAAAMPADVAAREVRAAARSMAKLATAVLATLRTGSEVDYASVKAEVAAEAQRLRDLADGHGRELAALSRRVEAAVGQMEAWQQRKAEAPEFAAEEXXXXXXXXXXXXXXXSRALREMRALIPEAVWDMNAGDIQAAAAQAPAQAGVSADGGGGATRVGGVFYPSELCVRLKECRPLHWLVSAPEDIAGANFLAGEGAAAFTQLEGMDLTEMRAVWSVLPREFLRDGDGKKAEWRARFRVQLEGLARQQDGAVVTAGW 361
[Close]
BLAST of mRNA_S-dermatodea_contig8110.16308.1 vs. uniprot
Match: A0A6H5JV39_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV39_9PHAE)

HSP 1 Score: 198 bits (504), Expect = 1.080e-51
Identity = 194/492 (39.43%), Postives = 236/492 (47.97%), Query Frame = 1 
Query: 1423 MPPLPPHRVRHPAYFYPTFEATRVRVERLQEQRRRLDSRRERLSALDLEMVEAKAEVDSACADARSAELRGRYGADTLRSARDAAKEALSTLVKERKGLVSSIAEAERMLSATYPSLAQLESEADSVAQILNRRRQPATDGS---PTHDGVGAVVTADAV-------------------IRVPGAFSAEPELRRRAAXXXKKLTPEEERALRASEVQRAVSSRDA----------LSGPA------------------AAAPASDET---IEHSGDA---------------------------GGTSA-----------VSVAVAALSREGRSRGASGEAGGAPSL-------------------VVAAAEGPVLASAAGTSRTGPKIAPPPIKPMSKSLAALVARNNASRMP-------GLAGDGRDARESRKAASPSLGFLDELKARAKRKEAPAFGKGGQGSGSGTAAAPRAGVSFLDELKARTAVVS 2547
            MPPLP HR R+PAYFYP+ EA   RV RL+EQRRRLD                         DARS ELR RYGAD LR AR+AAKEA S LV+E++ L++S+AEAE+MLS+TYPSL QLE+EA+++A IL+R    A D +   P  DG  AV   D+                    +RVPGAFSAEPELRRRA    +KLTPEEER +R+ EVQRAV+SRD           ++GPA                  AAAP+ D     +E SG A                           GG  +           V+ AV AL  +  S  A+  AG   SL                     A +E P     +  +R    +AP   KPMSK+LAAL+AR      P       G  GD  +AR+  KA  P LGFL ELKARA                 G AA P  G SFLDELKA+TA +S
Sbjct:    1 MPPLPAHRARNPAYFYPSSEAMASRVARLREQRRRLDXXXXXXXXXXXXXXXXXXXXXXXXXDARSGELRERYGADILRGAREAAKEAHSALVREKRCLLASVAEAEKMLSSTYPSLTQLEAEAEAIAGILDRAATAAADNNGKTPPKDGEIAVTIQDSTSASDQTDRPGVAATAEVGAVRVPGAFSAEPELRRRAVAAARKLTPEEERRIRSGEVQRAVASRDVAGGVGGGQATITGPAVAEPSPATGSGGVAGTGAAAAPSLDPVAAAVERSGPAACCPELGAQANACEPAARKMGSSLELAGGCDSHAPPPPRRPVKVAPAVLALLTKQHSARATAAAGARESLEARPKGKGSAAPXXFXXXXXAAGSECPSAEIPSAGARAAVPVAPS-AKPMSKTLAALLARRADRPTPSGPAAGGGFDGDENEARK--KATCPPLGFLGELKARAXXXXXXXXXXXXP-EREGKAALPTGG-SFLDELKAKTARIS 487
[Close]
BLAST of mRNA_S-dermatodea_contig8110.16308.1 vs. uniprot
Match: A0A067C5X9_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067C5X9_SAPPC)

HSP 1 Score: 177 bits (449), Expect = 4.240e-42
Identity = 132/391 (33.76%), Postives = 197/391 (50.38%), Query Frame = 1 
Query:  892 RDLRALRRRVETAVGQVESWQQRRAEAPEFDAEEAAREEAWSKTNREANTAALKEMRALLPE------------ASGDGGMFYPSDLCVRLRECRPLHWLVSAPEDIAGGNFLAGEGAAAFTQLEGMDVTEMRALWCVLPREFTRDPGGKKKEWRSRFRAQLEGLVRQQDGAVITAGWDPVRGRRATSRMPPLPPHRVRHPAYFYPTFEATRVRVERLQEQRRRLDSRRERLSAL-DLEMVEAKAEVDSACADARSAELRGRYGADTLRSARDAAKEALSTLVKERKGLVSSIAEAERMLSATYPSLAQLESEADSVAQILNRRRQPATDGSPTHDGVGAVVTADAVIRVPGAFSAEPELRRRAAXXXKKLTPEEERALRASEVQRAVSSR 2025
            R+L+   R++   + Q+E W+ RR  A E+  E    EEAW   +   N   L+ + +L+P+            A+   G+ Y  DL   L++ + L W+V+   D A  NF++G+ A  FT LE  D+TEMRA++  LP  F  D  G+K EWR  F A L+ LV+Q  G  + AGWDPV+G RA  ++ PL   ++ +P Y YPT +  + R+ + + Q +RL  ++ RL AL + E+  AK E  +   D RS +L   +G  TL   RD AK+   +L KER GL S I  AER +    P+  Q     D +A I  R   P         GV           + G F+  P+++ +     KKL+ EEE   R  E+  A++ R
Sbjct:  449 RELQIKDRQINATLKQMEIWRSRRENAKEYSGEMKRLEEAWRANHSADNQVCLERLCSLIPDSIAAMSVDQLLDAAKQAGVLYTRDLVNYLKQNKLLQWVVTHEVDKARDNFISGDTAQCFTNLELYDITEMRAIYLALPDAFEFDKEGRKAEWRVGFIAHLKVLVQQYHGETVKAGWDPVKGARAEVKLKPLSDKQLLNPVYRYPTEDEIKQRLVKFETQAKRLAQKKARLQALVEHEIPLAKKEYHAVSDDCRSDDLIKSFGKPTLIRLRDEAKKIFQSLCKERDGLKSEIIIAERAIQVACPTHEQY---LDEIAAI--RLLPP-----DIRHGV-----------IRGPFAPTPDIKPKERAVHKKLSAEEEALARKHELSNAIAER 818
[Close]
BLAST of mRNA_S-dermatodea_contig8110.16308.1 vs. uniprot
Match: D7FIN4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIN4_ECTSI)

HSP 1 Score: 177 bits (448), Expect = 9.820e-42
Identity = 142/440 (32.27%), Postives = 210/440 (47.73%), Query Frame = 1 
Query:  895 DLRALRRRVETAVGQVESWQQRRAEAPEFDA--EEAAREEAWSKTNREANTAALKEMRALLP------------EASGDGGMFYPSDLCVRLRECRPLHWLVSAPEDIAGGNFLAGEGAAAFTQLEGMDVTEMRALWCVLPREFTRDPGGKKKEWRSRFRAQLEGLVRQQDGAVITAGWDPVRGRRATSRMPPLPPHRVRHPAYFYPTFEATRVRVERLQEQRRRLDSRRERLSALDLEMV-EAKAEVDSACADARSAELRGRYGADTLRSARDAAKEALSTLVKERKGLVSSIAEAERMLSATYPSLAQLESEADSVAQILNRRRQP----------------ATD--------------GSPTHDGVG----AVVTA----------DAVIRVPGAFSAEPELRRRAAXXXKKL---TPEEERALRASEVQRAVSSRD 2028
            DLR  R   + A+ ++E W++R+   PE+    E A +E+AW +  REAN  AL+  R L+P            + + D G  YP +L +R++E R LHW+V+ P+DIA  NFL G+ A  FT L+  D+ E+RA+   LP +F  D  G+K  WR  F  + + LV Q+ G  ++ GWDP  G R   ++P L P + R   YFYPT      RV++LQE           L+ +  E++ EAK E  +   D R    +  +  + LR ARD AK  +  L KE + L   ++ A+R L  +  ++  L +EAD+  ++L+ R +                 AT+              GS   D V     AVVTA          +  + V GAF   PELR R A     L   T +EE  +R  E+    + RD
Sbjct:  972 DLRKTRSGSQAALARMEKWRERKEALPEYGQGNEVADQEKAWFEREREANDLALQRTRKLIPVGVTRLTVAELEQHALDAGSLYPRELTLRIKENRLLHWVVTHPDDIARSNFLRGDHAHFFTNLDKYDLVELRAIMACLPAKFEVDADGRKAAWRELFLQRAQSLVAQERGDTVSGGWDPEIGARREVQLPQLTPEQTRRKEYFYPTAAEVEDRVQKLQEXXXXXXXXXXXLAHVKDELLPEAKEEYANVLEDTRHPANKEAFRPEDLRRARDEAKSEVDRLAKEARRLEGDVSSAKRALRESPYTVDSLRAEADATRRLLSERARKQRLLAKRKEKAAAEAAATEXXXXXXXXXXXXXAGSEPGDEVAIALAAVVTAVVEKAEDEEVEEGLEVEGAFDPTPELRSRFADKSSSLRFVTADEEARMRKEELASVFAVRD 1411
[Close]
BLAST of mRNA_S-dermatodea_contig8110.16308.1 vs. uniprot
Match: A0A1V9ZGN9_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZGN9_9STRA)

HSP 1 Score: 165 bits (417), Expect = 3.890e-38
Identity = 129/401 (32.17%), Postives = 197/401 (49.13%), Query Frame = 1 
Query:  892 RDLRALRRRVETAVGQVESWQQRRAEAPEFDAEEAAREEAWSKTNREANTAALKEMRALLPE------------ASGDGGMFYPSDLCVRLRECRPLHWLVSAPEDIAGGNFLAGEGAAAFTQLEGMDVTEMRALWCVLPREFTRDPGGKKKEWRSRFRAQLEGLVRQQDGAVITAG----------WDPVRGRRATSRMPPLPPHRVRHPAYFYPTFEATRVRVERLQEQRRRLDSRRERLSAL-DLEMVEAKAEVDSACADARSAELRGRYGADTLRSARDAAKEALSTLVKERKGLVSSIAEAERMLSATYPSLAQLESEADSVAQILNRRRQPATDGSPTHDGVGAVVTADAVIRVPGAFSAEPELRRRAAXXXKKLTPEEERALRASEVQRAVSSR 2025
            ++L+   R +   + Q+E W+ RR  + E+ AE    E AW   +   N   L+ + +L+P+            A+   G+ Y  DL   L++ + L W+V+  +D A  NF++G+ A  FT LE  D+TEMR ++  LP  F  D  G+K EWR+ F A L+ LV+Q DG  + AG          +    G RA  ++ PL   ++ +P Y YPT +  + R+ + + Q +RL  ++ RL  L D E+  AK E  +   D RS +L   +G  TL   RD AK+   +L KER GL S +A AER +    P+  Q   E  ++ Q+    R                   +AVI  PG F+  P L+ +     KKL+ EEE A R SE+  A++ R
Sbjct:  461 KELQRKERHINATLKQLEVWRARRETSKEYPAEMRRLEAAWCAKHLPDNQVCLERLCSLIPDSIAAMPIETLLDAARAAGVLYTRDLANYLKQNKLLQWVVTHEKDKARDNFISGDTAQCFTNLEMYDITEMRGIYLALPESFEFDKEGRKAEWRADFIAHLKILVQQYDGDTVKAGHATAVQGGPAYAHCAGARAEVKLKPLSDKQLLNPVYRYPTEDEIQQRLVKFETQAKRLAQKKTRLQTLSDHEIPLAKKEYHAVSDDCRSEDLIKSFGKATLIRLRDEAKKIYQSLCKERDGLKSEVAVAERAIQTACPTHEQYLEEIAAIRQLPPDVR-------------------NAVI--PGPFAKTPALKPKERAMHKKLSAEEEAAARKSELSNAIAER 840
[Close]
BLAST of mRNA_S-dermatodea_contig8110.16308.1 vs. uniprot
Match: A0A1V9ZQ70_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZQ70_9STRA)

HSP 1 Score: 154 bits (389), Expect = 9.870e-35
Identity = 123/391 (31.46%), Postives = 191/391 (48.85%), Query Frame = 1 
Query:  892 RDLRALRRRVETAVGQVESWQQRRAEAPEFDAEEAAREEAWSKTNREANTAALKEMRALLPE------------ASGDGGMFYPSDLCVRLRECRPLHWLVSAPEDIAGGNFLAGEGAAAFTQLEGMDVTEMRALWCVLPREFTRDPGGKKKEWRSRFRAQLEGLVRQQDGAVITAGWDPVRGRRATSRMPPLPPHRVRHPAYFYPTFEATRVRVERLQEQRRRLDSRRERLSAL-DLEMVEAKAEVDSACADARSAELRGRYGADTLRSARDAAKEALSTLVKERKGLVSSIAEAERMLSATYPSLAQLESEADSVAQILNRRRQPATDGSPTHDGVGAVVTADAVIRVPGAFSAEPELRRRAAXXXKKLTPEEERALRASEVQRAVSSR 2025
            ++L    R+V + + ++E W+ RR  A E+ AE    E  W   +   N   L+ + +L+PE            A+   G+ Y  DL   L++ + L W+V+  +D A  NF+ G+ A  FT +E  D+TE+RA++  LP  F  D  G+K EWR  F + L+ LV+QQ+G  +TA    +   RA  ++ PL   ++ +P Y YPT +  + R+ + + Q +RL  ++ RL AL D E+  AK E  +   D RS  L   +G  TL   RD AK+   +L +ER  L   +A AER +    P+  Q   E  ++ Q+    R             GAV+        PG F   P L+ +     KKL+ EEE   R  E+  A++ R
Sbjct:  444 KELAIKERKVNSTLKKMEIWRTRRENAKEYPAELRKVEAEWRAKHLLDNQICLERLCSLIPESIAAMSIEMLLDATKAMGVLYTRDLANYLKQNKLLQWVVTHEKDKARENFITGDTAQCFTNIEMYDITELRAIYLALPENFEFDKEGRKSEWRQNFVSHLKVLVQQQNGDSVTAN---LVKTRAEVKLKPLNDKQLLNPVYRYPTEDEIKQRLLKFETQAKRLAQKKSRLQALNDNEIPLAKKEYHAVSDDCRSENLIKSFGKATLIRLRDEAKKIFQSLCQERDSLKGEVAAAERTIQQACPTHEQYLEEIAAIRQLPPEVR-------------GAVI--------PGPFPPRPILKPKERAMHKKLSAEEEALARKHELSSAIAKR 810
[Close]
BLAST of mRNA_S-dermatodea_contig8110.16308.1 vs. uniprot
Match: A0A418B5V4_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A418B5V4_9STRA)

HSP 1 Score: 149 bits (376), Expect = 2.370e-33
Identity = 162/566 (28.62%), Postives = 245/566 (43.29%), Query Frame = 1 
Query:  421 VESLQEQVALLKAAAGLSDEELTWRIETAKPEANAYRIASAALERAEATYERLLWRQGQL------------------------QIAHARLTGRGVGGDAATSAFAVAVARVAGGATDDRALSRLRSSAETEVRAAAERMARLAGAVSVTVRTGSEVDRVGVVSEVAADAGALASRAEATDRDLRALRRRVETAV-GQVESWQQRRAEAPEFDAEEAA------REEAWSKTNREANTAALKEMRALLPE------------ASGDGGMFYPSDLCVRLRECRPLHWLVSAPEDIAGGNFLAGEGAAAFTQLEGMDVTEMRALWCVLPREFTRDPGGKKKEWRSRFRAQLEGLVRQQDGAVITAGWDPVRGRRATSRMPPLPPHRVRHPAYFYPTFEATRVRVERLQEQRRRLDSRRERLSALDLEMVEAKAEVDSACADARSAELRGRYGADTLRSARDAAKEALSTLVKERKGLVSSIAEAERMLSATYPSLAQLESEADSVAQILNRRRQPATDGSPTHDGVGAVVTADAVIRVPGAFSAEPELRRRAAXXXKKLTPEEERAL 1989
            V  L EQ+ +LK+  GL+DE+L W++E+AK  +NA+ +A   L  AE  Y+RLL+ Q                            +       + +   A  +A   AV  VA    +    S L +  + E++ A       +     +V T   VD    + +   +   L  + +A      AL+++V  A    V S+    A+A  F   E A       E  W   +   N    + + +L+P+            A+   G+ Y  DL   L++ + L W+V+   D +  NFL G+ A  F   E  DVTEMR L+  LP  F  D  G+K EWRS F A L+ LV+QQ G  + AGWDPV+G RA  ++ P    ++ +P Y YPT    + R+ER + Q+ R+      L   D+ M  AK E  +   DARS +L  ++G   L   RD +K+   +L KE   L   +A  ER      P+  Q   E  ++ Q+    R           GV           + G F A P ++ +     KKL+ EEE AL
Sbjct:   64 VLQLTEQINMLKSTLGLTDEDLQWKVESAK--SNAFMLADKHLATAEEEYDRLLYEQSLWISCPFEDCTKGTKELILLPRLCIHMVTELAPLLKALCVQAKEAAETKAVMLVAQQEVNSTKKSLLDARVDAEMKRARSN----SPPRRESVLTRDCVDYQTALGDQKKELLVLQEKFKAGVLKQDALQKQVVAATEAMVASFG---AQAVSFSTNEMADNARELMEVEWKAQHAAENQTCYERLCSLIPDTITSMSVEQLLDAAKAAGVLYTRDLANYLKQNKFLQWIVTHERDKSRDNFLTGDTAQCFANFEAFDVTEMRGLFVALPDMFEFDKDGRKAEWRSAFVAHLKMLVQQQRGECVKAGWDPVKGARAEVKLKPPTEKQLLNPMYRYPTEVEIKQRLERFETQKARMQV----LITQDIPM--AKKEYHAVAEDARSEDLLRQFGKPALIKLRDESKKVYQSLCKECDTLKGEVAVGERAAQIACPTYEQYVDEIAAIRQLAPEVRA----------GV-----------INGPFDAHPVVKPKERAVHKKLSAEEEVAL 593
[Close]
BLAST of mRNA_S-dermatodea_contig8110.16308.1 vs. uniprot
Match: A0A6H5JVF1_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVF1_9PHAE)

HSP 1 Score: 103 bits (258), Expect = 4.240e-19
Identity = 54/58 (93.10%), Postives = 56/58 (96.55%), Query Frame = 1 
Query:  418 DVESLQEQVALLKAAAGLSDEELTWRIETAKPEANAYRIASAALERAEATYERLLWRQ 591
            DVESLQEQVALLKAAAGLSDEELTWR+ETAKPEANAYRIA+AALERAE  YERLLWRQ
Sbjct:  693 DVESLQEQVALLKAAAGLSDEELTWRMETAKPEANAYRIAAAALERAETAYERLLWRQ 750
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig8110.16308.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
D7FRP3_ECTSI2.240e-19854.52Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JQI8_9PHAE9.230e-8654.19Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JV39_9PHAE1.080e-5139.43Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A067C5X9_SAPPC4.240e-4233.76Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]
D7FIN4_ECTSI9.820e-4232.27Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A1V9ZGN9_9STRA3.890e-3832.17Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]
A0A1V9ZQ70_9STRA9.870e-3531.46Uncharacterized protein n=1 Tax=Thraustotheca clav... [more]
A0A418B5V4_9STRA2.370e-3328.62Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]
A0A6H5JVF1_9PHAE4.240e-1993.10Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig8110contigS-dermatodea_contig8110:3529..9022 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score623.2
Seed ortholog evalue1.7e-175
Seed eggNOG ortholog2880.D7FRP3
EggNOG OGs2C7IG@1,2QWI0@2759
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-00_003320.1
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons11
Model size2550
Cds size2550
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622925321.693519-CDS-S-dermatodea_contig8110:3528..36361622925321.693519-CDS-S-dermatodea_contig8110:3528..3636Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8110 3529..3636 -
1694079853.952577-CDS-S-dermatodea_contig8110:3528..36361694079853.952577-CDS-S-dermatodea_contig8110:3528..3636Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8110 3529..3636 -
1622925321.7073607-CDS-S-dermatodea_contig8110:3723..39991622925321.7073607-CDS-S-dermatodea_contig8110:3723..3999Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8110 3724..3999 -
1694079853.9661725-CDS-S-dermatodea_contig8110:3723..39991694079853.9661725-CDS-S-dermatodea_contig8110:3723..3999Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8110 3724..3999 -
1622925321.7193272-CDS-S-dermatodea_contig8110:4170..45871622925321.7193272-CDS-S-dermatodea_contig8110:4170..4587Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8110 4171..4587 -
1694079853.976568-CDS-S-dermatodea_contig8110:4170..45871694079853.976568-CDS-S-dermatodea_contig8110:4170..4587Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8110 4171..4587 -
1622925321.7335184-CDS-S-dermatodea_contig8110:5614..59781622925321.7335184-CDS-S-dermatodea_contig8110:5614..5978Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8110 5615..5978 -
1694079853.9866233-CDS-S-dermatodea_contig8110:5614..59781694079853.9866233-CDS-S-dermatodea_contig8110:5614..5978Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8110 5615..5978 -
1622925321.7479103-CDS-S-dermatodea_contig8110:6356..66611622925321.7479103-CDS-S-dermatodea_contig8110:6356..6661Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8110 6357..6661 -
1694079853.9989705-CDS-S-dermatodea_contig8110:6356..66611694079853.9989705-CDS-S-dermatodea_contig8110:6356..6661Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8110 6357..6661 -
1622925321.7607572-CDS-S-dermatodea_contig8110:6754..70931622925321.7607572-CDS-S-dermatodea_contig8110:6754..7093Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8110 6755..7093 -
1694079854.0078826-CDS-S-dermatodea_contig8110:6754..70931694079854.0078826-CDS-S-dermatodea_contig8110:6754..7093Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8110 6755..7093 -
1622925321.7739031-CDS-S-dermatodea_contig8110:7189..73391622925321.7739031-CDS-S-dermatodea_contig8110:7189..7339Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8110 7190..7339 -
1694079854.0167134-CDS-S-dermatodea_contig8110:7189..73391694079854.0167134-CDS-S-dermatodea_contig8110:7189..7339Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8110 7190..7339 -
1622925321.7862902-CDS-S-dermatodea_contig8110:7720..78701622925321.7862902-CDS-S-dermatodea_contig8110:7720..7870Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8110 7721..7870 -
1694079854.0255759-CDS-S-dermatodea_contig8110:7720..78701694079854.0255759-CDS-S-dermatodea_contig8110:7720..7870Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8110 7721..7870 -
1622925321.8023005-CDS-S-dermatodea_contig8110:8413..86361622925321.8023005-CDS-S-dermatodea_contig8110:8413..8636Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8110 8414..8636 -
1694079854.0344281-CDS-S-dermatodea_contig8110:8413..86361694079854.0344281-CDS-S-dermatodea_contig8110:8413..8636Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8110 8414..8636 -
1622925321.811243-CDS-S-dermatodea_contig8110:8705..87701622925321.811243-CDS-S-dermatodea_contig8110:8705..8770Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8110 8706..8770 -
1694079854.0432494-CDS-S-dermatodea_contig8110:8705..87701694079854.0432494-CDS-S-dermatodea_contig8110:8705..8770Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8110 8706..8770 -
1622925321.8205051-CDS-S-dermatodea_contig8110:8869..90221622925321.8205051-CDS-S-dermatodea_contig8110:8869..9022Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8110 8870..9022 -
1694079854.0533264-CDS-S-dermatodea_contig8110:8869..90221694079854.0533264-CDS-S-dermatodea_contig8110:8869..9022Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8110 8870..9022 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig8110.16308.1prot_S-dermatodea_contig8110.16308.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig8110 3529..9022 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig8110.16308.1

>prot_S-dermatodea_contig8110.16308.1 ID=prot_S-dermatodea_contig8110.16308.1|Name=mRNA_S-dermatodea_contig8110.16308.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=850bp
KSVAVPTKNTTSTSSTSTSSKKRSSALSPSWIPAALRPPPARPGDIGFRS
GGATALTAAAAAKANSAADPPSWRGGVGGAATQAAGGQRARGGSERGDGG
SEKDPVAAAAAAAIMAKLARGGAARGRGGSGDGGGSGSGDVESLQEQVAL
LKAAAGLSDEELTWRIETAKPEANAYRIASAALERAEATYERLLWRQGQL
QIAHARLTGRGVGGDAATSAFAVAVARVAGGATDDRALSRLRSSAETEVR
AAAERMARLAGAVSVTVRTGSEVDRVGVVSEVAADAGALASRAEATDRDL
RALRRRVETAVGQVESWQQRRAEAPEFDAEEAAREEAWSKTNREANTAAL
KEMRALLPEASGDGGMFYPSDLCVRLRECRPLHWLVSAPEDIAGGNFLAG
EGAAAFTQLEGMDVTEMRALWCVLPREFTRDPGGKKKEWRSRFRAQLEGL
VRQQDGAVITAGWDPVRGRRATSRMPPLPPHRVRHPAYFYPTFEATRVRV
ERLQEQRRRLDSRRERLSALDLEMVEAKAEVDSACADARSAELRGRYGAD
TLRSARDAAKEALSTLVKERKGLVSSIAEAERMLSATYPSLAQLESEADS
VAQILNRRRQPATDGSPTHDGVGAVVTADAVIRVPGAFSAEPELRRRAAA
AAKKLTPEEERALRASEVQRAVSSRDALSGPAAAAPASDETIEHSGDAGG
TSAVSVAVAALSREGRSRGASGEAGGAPSLVVAAAEGPVLASAAGTSRTG
PKIAPPPIKPMSKSLAALVARNNASRMPGLAGDGRDARESRKAASPSLGF
LDELKARAKRKEAPAFGKGGQGSGSGTAAAPRAGVSFLDELKARTAVVS*
back to top

mRNA from alignment at S-dermatodea_contig8110:3529..9022-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig8110.16308.1 ID=mRNA_S-dermatodea_contig8110.16308.1|Name=mRNA_S-dermatodea_contig8110.16308.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=5494bp|location=Sequence derived from alignment at S-dermatodea_contig8110:3529..9022- (Saccorhiza dermatodea SderLu1190fm monoicous)
AAATCTGTCGCGGTCCCCACGAAAAACACGACCTCTACGAGCAGCACCAG
CACCAGTAGCAAAAAGCGCTCCTCCGCTTTGTCGCCGTCGTGGATCCCAG
CGGCGCTGCGCCCACCACCGGCGCGCCCCGGAGACATCGGCTTCCGCAGC
GGGGTCGGCTTCCGCATGCGCCCGCCAACGTCATCGTCATCGCTGCCGCG
CCGACCCGCCCGCACCGCGACTGCCAGCGGCGCCGACGGTGGAGCAGGCA
AGGGAGCGACGGCACTAACGGCCGCCGCGGCCGCGAAAGCGAACTCTGCC
GCGGACCCGCCCTCGTGGTCTGGGCGGCTCCGCTCCGCGCCACCCGCGTT
TATTCCGGGCTCGGCCGGTGGTGGCGGCGGCGCGAGGCGAGGCGGGGTGG
GTGGAGCGGCGACGCAAGCGGCGGGGGGGCAGAGAGCTCGCGGGGGATCG
GAGAGGGGTGACGGTGGGAGTGAGAAGGATCCTGTGGCGGCGGCGGCGGC
GGCGGCGATCATGGCCAAACTTGCGCGGGGCGGCGCCGCGCGAGGGCGTG
GGGGTAGTGGCGACGGCGGCGGTAGCGGTAGCGGGGATGTTGAGAGCTTG
CAGGAGCAGGTGGGTGGGATTATGGGGGCGACGAGGAGAGGGTGTGAGAT
TGGGGGGGTATGGACGTCTCGCTTTCACTCTCTCTGCTTCTCTACCACGG
GCTCTCGAATGTTGTGTCGGATTTGATTTTCTGGGGAGTTTGCGTGGGAG
CTGATTTCCAGTGTGTTTGTTTTTGTTTTTGTTGCGGCGTTCTTCTTGCG
TCACACTCCTGCAGGGCAGATCGTTGAGCTTTTTTTTGTTGCCCATGCTT
GATTTTATATTTTGTGCAGTGGACGGTATGGTTTGTTTTTGGGTCTTGAC
CCCGGCGACATACTCTACACATTCAGTATTCATCATATAGTATAGCCCTA
CAGACTGCTCGTTCGTCACCTTCAATATGCAGTGCGAAGCCAAGAGCGAA
TGCGGCACCAACTCCGATGCTGTTTCGAAGTTCAAAATTCCTCAGTCTGC
CCAGAAATATTAGAGCTAGACTGAAGTATAGAACAAGCGGTGTCTCGTAC
GATAATAAAATTACGGAGCTGCCGTGCTCTCTCGCTCGCTCCATCCTCGC
AGGTCGCGCTGCTAAAAGCTGCCGCAGGCCTTTCTGACGAAGAGCTGACA
TGGCGCATCGAGACCGCCAAGCCCGAGGCCAACGCGTATCGCATCGCTTC
GGCGGCGCTGGAAAGGGCGGAAGCGACGTACGAACGCCTGCTGTGGCGAC
AGGTGAACAAAACAAAGAAACTGCGCGAAACGTTCGTGACAGCAATGCTT
GCAAGTCGCTCCTGCCGTCTGGTATTGGGGTGTCCCTACGTGTGGTTCCT
CTGGCGAGACTAATTGGGGGCTGTGTCACCCCCACCTTGCGACCTTGCCG
ATGCTATTAATAGGCGTGCGAGGAGCCAAGAGGTTGGTACGTTACTCTAG
GACTCTGCTTGCACCACTTGGAATTAGGTGTGGTCAATTTCAAGCTATGA
TTCGAGTACAGGGAACACACCAATCAGATACACAGCAGTGACACTATCAC
TCTTCCACATCTCCTTCTCTCTCAATGTCCTCCCGCACTCATCGACCGTC
ATCGCCCCGCCGCTGCCCCCCCCCCCCCCGCAGGGCCAGCTCCAAATCGC
GCACGCCCGCCTTACCGGGAGGGGTGTCGGCGGCGACGCGGCAACTTCGG
CCTTTGCCGTGGCCGTCGCGCGGGTCGCCGGGGGGGCGACGGACGACCGA
GCGCTGTCCCGCCTCCGGTCCTCCGCCGAAACCGTTCTTGCGGACCTGCA
ACGACCGGCCGCTGCCGCTGCGACACCCCCACCAGGATCTACCGGTGCTG
CTGCGCTGCCGGCGGACGCAGCCGCCGAGGAGGTCAGAGCGGCGGCCGAG
CGCATGGCGAGACTGGCGGGGGCAGTCTCGGTGACGGTCCGTACGGGGTC
CGAGGTCGATCGCGTCGGGGTGGTGTCGGAGGTTGCGGCGGATGCCGGGG
CGCTCGCCAGCCGCGCGGAGGCGACAGATCGGGACCTGCGCGCGCTGCGG
CGAAGGGTTGAGACGGCGGTGGGGCAGGTCGAGTCGTGGCAGCAGCGGCG
GGCGGAAGCGCCAGAGTTCGACGCGGAGGAAGCGGCAAGGGAGGAGGCCT
GGAGCAAGACGAACCGGGAGGCTAACACGGCCGCGCTCAAGGAGATGCGC
GCGCTTCTCCCCGAGGCTGTGTGGGATATGAATGCCGCGGATATTCAGGC
GGCCGCGGCGGCTGCGTCGGAGACGGAAAGCGAGGCGGCGGGGACGGATG
GAGCAAGCGAGAGCGGCGACGGCGGGATGTTTTACCCCTCGGACCTCTGC
GTGCGACTGAGGGAGTGCCGGCCCCTGCACTGGCTTGTGAGCGCCCCGGA
GGATATCGCCGGCGGCAATTTTCTCGCCGGAGAAGGCGCCGCGGCGTTCA
CGCAGCTGGAAGGGATGGATGTGACCGAGATGCGCGCCCTGTGGTGCGTT
CTGCCGAGAGAGTTCACGCGCGATCCCGGCGGGAAGAAGAAGGAGTGGAG
GTCTCGTTTCCGGGCTCAGCTGGAGGGGCTGGTACGGCAACAAGATGGGG
CCGTCATCACCGCCGGGTGAGTAACAGCATTGCTCTGGGGTGTTTATTGC
GGTGCGTAGGCGGCGTTGTTTGAACTCGTAGGGGCGGGGGGGGGGGCAGC
GTTCAATTTTTTGCGTCGTGGAGATGACTTGTTTGGTAAAGAATGGTGGC
GCCTATTCCGCTGCTTCGTAGAGTTAGCTTGCGCTCTCTGTTTTTCAAAT
TTCGCTCCCGTTTCGCTTTGCACGCCTTCCGCTCCAAAAGCGTATGCTTT
TTATGGCCGTTAAAGCTGGACGAGCAGCAGCCGATCCCTAACACGAAATT
TCCGATAAATATTACGTCATCAGGTGTCGTCCTCTGTTCTCAGCCGCTCC
CGCCCGCGCCCCACCCCCCTGACCCACACCCATCTACCGTGCAGCTGGGA
CCCCGTCCGCGGCCGGCGAGCGACGAGCCGTATGCCGCCGCTACCCCCAC
ACCGTGTCCGCCACCCGGCGTATTTCTACCCCACGTTCGAGGCCACCAGG
GTGCGCGTGGAACGGCTACAGGAGCAGCGCCGGCGGCTGGATTCTCGCAG
GGAGCGTTTGTCGGCGCTCGATCTTGAGATGGTCGAGGCTAAGGCCGAGG
TCGACTCCGCGTGCGCGGACGCGCGGTCGGCGGAGCTTCGGGGGCGGTAC
GGGGCGGACACTCTCCGGAGTGCACGGGACGCGGCGAAGGAGGCGCTCTC
GACCCTCGTGAAGGAGCGGAAGGGGCTCGTTTCGAGCATAGCCGAGGCTG
AGCGGATGGTGAGACGGCGCGTGAGGTGTCTGATACGGTGGTTGTGGCGA
GCGCTGGGGTGGTGGCGGTTCTGTTCTGTTGTGTTCAAGGTCGGCCCTAA
CGACGATACACGATACACACTCACACGCCTACAATAGCTATATTTTCGAA
GGACCATACATAGTTAGCGGGTCCAAATTCGTCTCAAATCTCACCTTTAA
AAAAAAACGTGTAGGCCAGAAATGATTGGGTATTCATGGTCGATATTATC
AAATAGGCCAGACCTCGCGTTTTGTTTTCATGAGAAAAACCTTGTTTTTT
GGGGTATCCATGGCCGGAACAACAGGGTATTCACGGTCGTGGCAGTTGGT
GCTGATTACTATTAATAGGTACCTCCGTACAGTAGTAGCTGTTCACCCTA
TACCTACAAGACAGCAGAGAGTTTAGCGCCTCCGTCCAAGATGGCAAACA
AGGAGCGTGGCAAACCGTTAGCCTCGTCCCCGCCACTACCTCCTCTCGGT
ATGAGATTCGCACGTCCTCGTAATTGCGAGAGCTGCTCGGGAACCGGGTT
CGCCGTTCTTATCGCTGAAGTTTTGGTGAAACGAGTCGTTGGCCCGACTC
AGAATTGTCGTCAGTTTTCTAAAACGAGTGGTCGGCTCGACTCCGATTCG
TCGTAATTATTTAGGGAAAATTTCGCGTCGACACAAGTAGATTGAGTGGT
CAGACCGGATCCAAAATAATACTATGATAGCTAAAATAGCCAACTCGACC
GAAGAGTCCCGACTGGGCGTTTCGAAAGCACGGATCCTTTAGCTCGTCTC
AGTTCGTCGTAGGTTCTGCACAGCATGGTATCGCCGTTGACTCGAATCAA
GACTCGCAAAATGTAAGTTTGATGGTGAAACAGGAACGGCTGGATTCGCA
GTATCAAACCGACCCGACGTAAAGATCAGACGCGTGCAGAAAGCTCCCAG
GATATTTGCCACCTCCGCCCCGCGCGTAACAAAACGGTACGTTCGTTGCC
TGCCTGCTACTGTACCCCCGTCGTTTGCGTTCCAGCTCTCCGCGACCTAC
CCGTCTTTGGCCCAGCTCGAATCAGAGGCAGATTCTGTCGCCCAGATCCT
CAACCGTCGCCGCCAACCTGCGACGGATGGCTCGCCGACGCACGACGGGG
TGGGCGCGGTGGTCACCGCCGACGCCGTGATCCGCGTGCCGGGGGCGTTC
AGCGCGGAGCCGGAGCTCCGGCGGAGAGCGGCGGCGGCCGCAAAAAAGCT
CACCCCGGAGGAAGAGCGTGCCCTCCGAGCCAGCGAGGTGCAGCGCGCGG
TGTCCTCAAGGGATGCTCTCTCAGGACCAGCCGCTGCCGCTCCTGCCTCC
GACGAAACGATCGAACACTCGGGCGACGCCGGAGGAACGTCCGCCGTTTC
CGTCGCGGTAGCCGCGCTTTCCCGAGAGGGGAGATCGCGCGGGGCGTCCG
GCGTCGGGCACGAAGACGGATGCTCGCGGAGACGAGTTAAGGCTGCTCCA
GGGGTTCTGGCCTTCCTCACAAAGGAGTACGGTGAAAGGGCGGCGACTGC
GGCACGGGGAGGTACCGGGACGGCGGTAACAGACGCCGGTGCCGCCGGCG
CCGCGTCGGGCTCGGAGACGAAGGAAGCAGGTGGCGCTCCGTCTCTTGTG
GTGGCGGCGGCAGAGGGTCCAGTGTTGGCTAGCGCGGCCGGCACGAGCCG
CACCGGGCCGAAAATCGCCCCTCCCCCGATAAAACCGATGTCGAAGAGCC
TGGCCGCGTTGGTGGCGCGGAATAATGCGAGCAGGATGCCGGGTTTGGCT
GGCGATGGACGCGACGCAAGAGAGAGTCGCAAGGCGGCATCGCCATCGCT
CGGTTTCCTGGACGAGCTAAAGGCACGCGCTAAGCGGAAGGAGGCGCCGG
TAGAGATGGCGGGCGAAAGCGGTGGAGCTGGTGTGAATGGAAGGGTTGGG
GGAGGGGGTGCTCGGGAAGGGGTTTCGACTCGGGAGGCTTTCGGGAAAGG
GGGGCAGGGATCTGGGTCTGGAACGGCTGCGGCACCGAGGGCGGGGGTCT
CTTTTCTGGATGAACTCAAGGCTCGGACCGCTGTTGTTTCTTAA
back to top

Coding sequence (CDS) from alignment at S-dermatodea_contig8110:3529..9022-

>mRNA_S-dermatodea_contig8110.16308.1 ID=mRNA_S-dermatodea_contig8110.16308.1|Name=mRNA_S-dermatodea_contig8110.16308.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=5100bp|location=Sequence derived from alignment at S-dermatodea_contig8110:3529..9022- (Saccorhiza dermatodea SderLu1190fm monoicous)
AAATCTGTCGCGGTCCCCACGAAAAACACGACCTCTACGAGCAGCACCAG
CACCAGTAGCAAAAAGCGCTCCTCCGCTTTGTCGCCGTCGTGGATCCCAG
CGGCGCTGCGCCCACCACCGGCGCGCCCCGGAGACATCGGCTTCCGCAGC
GGGAAATCTGTCGCGGTCCCCACGAAAAACACGACCTCTACGAGCAGCAC
CAGCACCAGTAGCAAAAAGCGCTCCTCCGCTTTGTCGCCGTCGTGGATCC
CAGCGGCGCTGCGCCCACCACCGGCGCGCCCCGGAGACATCGGCTTCCGC
AGCGGGGGAGCGACGGCACTAACGGCCGCCGCGGCCGCGAAAGCGAACTC
TGCCGCGGACCCGCCCTCGTGGGAGCGACGGCACTAACGGCCGCCGCGGC
CGCGAAAGCGAACTCTGCCGCGGACCCGCCCTCGTGGCGAGGCGGGGTGG
GTGGAGCGGCGACGCAAGCGGCGGGGGGGCAGAGAGCTCGCGGGGGATCG
GAGAGGGGTGACGGTGGGAGTGAGAAGGATCCTGTGGCGGCGGCGGCGGC
GGCGGCGATCATGGCCAAACTTGCGCGGGGCGGCGCCGCGCGAGGGCGTG
GGGGTAGTGGCGACGGCGGCGGTAGCGGTAGCGGGGATGTTGAGAGCTTG
CAGGAGCAGGCGAGGCGGGGTGGGTGGAGCGGCGACGCAAGCGGCGGGGG
GGCAGAGAGCTCGCGGGGGATCGGAGAGGGGTGACGGTGGGAGTGAGAAG
GATCCTGTGGCGGCGGCGGCGGCGGCGGCGATCATGGCCAAACTTGCGCG
GGGCGGCGCCGCGCGAGGGCGTGGGGGTAGTGGCGACGGCGGCGGTAGCG
GTAGCGGGGATGTTGAGAGCTTGCAGGAGCAGGTCGCGCTGCTAAAAGCT
GCCGCAGGCCTTTCTGACGAAGAGCTGACATGGCGCATCGAGACCGCCAA
GCCCGAGGCCAACGCGTATCGCATCGCTTCGGCGGCGCTGGAAAGGGCGG
AAGCGACGTACGAACGCCTGCTGTGGCGACAGGTCGCGCTGCTAAAAGCT
GCCGCAGGCCTTTCTGACGAAGAGCTGACATGGCGCATCGAGACCGCCAA
GCCCGAGGCCAACGCGTATCGCATCGCTTCGGCGGCGCTGGAAAGGGCGG
AAGCGACGTACGAACGCCTGCTGTGGCGACAGGGCCAGCTCCAAATCGCG
CACGCCCGCCTTACCGGGAGGGGTGTCGGCGGCGACGCGGCAACTTCGGC
CTTTGCCGTGGCCGTCGCGCGGGTCGCCGGGGGGGCGACGGACGACCGAG
CGCTGTCCCGCCTCCGGTCCTCCGCCGAAACCGGCCAGCTCCAAATCGCG
CACGCCCGCCTTACCGGGAGGGGTGTCGGCGGCGACGCGGCAACTTCGGC
CTTTGCCGTGGCCGTCGCGCGGGTCGCCGGGGGGGCGACGGACGACCGAG
CGCTGTCCCGCCTCCGGTCCTCCGCCGAAACCGAGGTCAGAGCGGCGGCC
GAGCGCATGGCGAGACTGGCGGGGGCAGTCTCGGTGACGGTCCGTACGGG
GTCCGAGGTCGATCGCGTCGGGGTGGTGTCGGAGGTTGCGGCGGATGCCG
GGGCGCTCGCCAGCCGCGCGGAGGCGACAGATCGGGACCTGCGCGCGCTG
CGGCGAAGGGTTGAGACGGCGGTGGGGCAGGTCGAGTCGTGGCAGCAGCG
GCGGGCGGAAGCGCCAGAGTTCGACGCGGAGGAAGCGGCAAGGGAGGAGG
CCTGGAGCAAGACGAACCGGGAGGCTAACACGGCCGCGCTCAAGGAGATG
CGCGCGCTTCTCCCCGAGGCTGAGGTCAGAGCGGCGGCCGAGCGCATGGC
GAGACTGGCGGGGGCAGTCTCGGTGACGGTCCGTACGGGGTCCGAGGTCG
ATCGCGTCGGGGTGGTGTCGGAGGTTGCGGCGGATGCCGGGGCGCTCGCC
AGCCGCGCGGAGGCGACAGATCGGGACCTGCGCGCGCTGCGGCGAAGGGT
TGAGACGGCGGTGGGGCAGGTCGAGTCGTGGCAGCAGCGGCGGGCGGAAG
CGCCAGAGTTCGACGCGGAGGAAGCGGCAAGGGAGGAGGCCTGGAGCAAG
ACGAACCGGGAGGCTAACACGGCCGCGCTCAAGGAGATGCGCGCGCTTCT
CCCCGAGGCTAGCGGCGACGGCGGGATGTTTTACCCCTCGGACCTCTGCG
TGCGACTGAGGGAGTGCCGGCCCCTGCACTGGCTTGTGAGCGCCCCGGAG
GATATCGCCGGCGGCAATTTTCTCGCCGGAGAAGGCGCCGCGGCGTTCAC
GCAGCTGGAAGGGATGGATGTGACCGAGATGCGCGCCCTGTGGTGCGTTC
TGCCGAGAGAGTTCACGCGCGATCCCGGCGGGAAGAAGAAGGAGTGGAGG
TCTCGTTTCCGGGCTCAGCTGGAGGGGCTGGTACGGCAACAAGATGGGGC
CGTCATCACCGCCGGAGCGGCGACGGCGGGATGTTTTACCCCTCGGACCT
CTGCGTGCGACTGAGGGAGTGCCGGCCCCTGCACTGGCTTGTGAGCGCCC
CGGAGGATATCGCCGGCGGCAATTTTCTCGCCGGAGAAGGCGCCGCGGCG
TTCACGCAGCTGGAAGGGATGGATGTGACCGAGATGCGCGCCCTGTGGTG
CGTTCTGCCGAGAGAGTTCACGCGCGATCCCGGCGGGAAGAAGAAGGAGT
GGAGGTCTCGTTTCCGGGCTCAGCTGGAGGGGCTGGTACGGCAACAAGAT
GGGGCCGTCATCACCGCCGGCTGGGACCCCGTCCGCGGCCGGCGAGCGAC
GAGCCGTATGCCGCCGCTACCCCCACACCGTGTCCGCCACCCGGCGTATT
TCTACCCCACGTTCGAGGCCACCAGGGTGCGCGTGGAACGGCTACAGGAG
CAGCGCCGGCGGCTGGATTCTCGCAGGGAGCGTTTGTCGGCGCTCGATCT
TGAGATGGTCGAGGCTAAGGCCGAGGTCGACTCCGCGTGCGCGGACGCGC
GGTCGGCGGAGCTTCGGGGGCGGTACGGGGCGGACACTCTCCGGAGTGCA
CGGGACGCGGCGAAGGAGGCGCTCTCGACCCTCGTGAAGGAGCGGAAGGG
GCTCGTTTCGAGCATAGCCGAGGCTGAGCGGATGCTGGGACCCCGTCCGC
GGCCGGCGAGCGACGAGCCGTATGCCGCCGCTACCCCCACACCGTGTCCG
CCACCCGGCGTATTTCTACCCCACGTTCGAGGCCACCAGGGTGCGCGTGG
AACGGCTACAGGAGCAGCGCCGGCGGCTGGATTCTCGCAGGGAGCGTTTG
TCGGCGCTCGATCTTGAGATGGTCGAGGCTAAGGCCGAGGTCGACTCCGC
GTGCGCGGACGCGCGGTCGGCGGAGCTTCGGGGGCGGTACGGGGCGGACA
CTCTCCGGAGTGCACGGGACGCGGCGAAGGAGGCGCTCTCGACCCTCGTG
AAGGAGCGGAAGGGGCTCGTTTCGAGCATAGCCGAGGCTGAGCGGATGCT
CTCCGCGACCTACCCGTCTTTGGCCCAGCTCGAATCAGAGGCAGATTCTG
TCGCCCAGATCCTCAACCGTCGCCGCCAACCTGCGACGGATGGCTCGCCG
ACGCACGACGGGGTGGGCGCGGTGGTCACCGCCGACGCCGTGATCCGCGT
GCCGGGGGCGTTCAGCGCGGAGCCGGAGCTCCGGCGGAGAGCGGCGGCGG
CCGCAAAAAAGCTCACCCCGGAGGAAGAGCGTGCCCTCCGAGCCAGCGAG
GTGCAGCGCGCGGTGTCCTCAAGGGATGCTCTCTCAGGACCAGCCGCTGC
CGCTCCTGCCTCCGACGAAACGATCGAACACTCGGGCGACGCCGGAGGAA
CGTCCGCCGTTTCCGTCGCGGTAGCCGCGCTTTCCCGAGAGGGGAGATCG
CGCGGGGCGTCCGGCCTCTCCGCGACCTACCCGTCTTTGGCCCAGCTCGA
ATCAGAGGCAGATTCTGTCGCCCAGATCCTCAACCGTCGCCGCCAACCTG
CGACGGATGGCTCGCCGACGCACGACGGGGTGGGCGCGGTGGTCACCGCC
GACGCCGTGATCCGCGTGCCGGGGGCGTTCAGCGCGGAGCCGGAGCTCCG
GCGGAGAGCGGCGGCGGCCGCAAAAAAGCTCACCCCGGAGGAAGAGCGTG
CCCTCCGAGCCAGCGAGGTGCAGCGCGCGGTGTCCTCAAGGGATGCTCTC
TCAGGACCAGCCGCTGCCGCTCCTGCCTCCGACGAAACGATCGAACACTC
GGGCGACGCCGGAGGAACGTCCGCCGTTTCCGTCGCGGTAGCCGCGCTTT
CCCGAGAGGGGAGATCGCGCGGGGCGTCCGGCGAAGCAGGTGGCGCTCCG
TCTCTTGTGGTGGCGGCGGCAGAGGGTCCAGTGTTGGCTAGCGCGGCCGG
CACGAGCCGCACCGGGCCGAAAATCGCCCCTCCCCCGATAAAACCGATGT
CGAAGAGCCTGGCCGCGTTGGTGGCGCGGAATAATGCGAGCAGGATGCCG
GGTTTGGCTGGCGATGGACGCGACGCAAGAGAGAGTCGCAAGGCGGCATC
GCCATCGCTCGGTTTCCTGGACGAGCTAAAGGCACGCGCTAAGCGGAAGG
AGGCGCCGGAAGCAGGTGGCGCTCCGTCTCTTGTGGTGGCGGCGGCAGAG
GGTCCAGTGTTGGCTAGCGCGGCCGGCACGAGCCGCACCGGGCCGAAAAT
CGCCCCTCCCCCGATAAAACCGATGTCGAAGAGCCTGGCCGCGTTGGTGG
CGCGGAATAATGCGAGCAGGATGCCGGGTTTGGCTGGCGATGGACGCGAC
GCAAGAGAGAGTCGCAAGGCGGCATCGCCATCGCTCGGTTTCCTGGACGA
GCTAAAGGCACGCGCTAAGCGGAAGGAGGCGCCGGCTTTCGGGAAAGGGG
GGCAGGGATCTGGGTCTGGAACGGCTGCGGCACCGAGGGCGGGGGTCTCT
TTTCTGGATGAACTCAAGGCTCGGACCGCTGTTGTTTCTTAAGCTTTCGG
GAAAGGGGGGCAGGGATCTGGGTCTGGAACGGCTGCGGCACCGAGGGCGG
GGGTCTCTTTTCTGGATGAACTCAAGGCTCGGACCGCTGTTGTTTCTTAA
back to top