mRNA_S-dermatodea_contig8109.16304.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
|
Overview
Homology
BLAST of mRNA_S-dermatodea_contig8109.16304.1 vs. uniprot
Match: A0A6H5K7W3_9PHAE (PUM-HD domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7W3_9PHAE) HSP 1 Score: 677 bits (1748), Expect = 4.130e-232 Identity = 398/635 (62.68%), Postives = 464/635 (73.07%), Query Frame = 1
Query: 1 QERLSLFSEMEEHIVELSQLTYSHHIVQRLFKDIKGAEGQKRLAKTFRGHTVRLATHAIGAEVVQTALSSLPTASATLIKSEFYGKEFALFDDGGQPHSLKAVLESRPDRRGVVMEHVHGVIVKLVAKSLMKFQFAHELLWEYFQEASPVQMQELVPQLVESYMILLSTRPGSMAAAMCAAHGGAKERKRMMRSFKGVVADALLHRDSYLAVMRLVESVDDTITCQKTILAELLKPLQVAPED--AKGSVPKPAKGSSAEEWVPRGTTGPKGNPEDGVPAGGEGDXXVSGMEXXXXXXXXXXK--------------------------------------EPEAVAEGAVPAPPS----MLAVMKSRTGCKILLRLLAPEHTGYLHPEELDILKPTMVPAPA----------------PKIAGAADGAAKEGA-APLVPSSKKEASVRRRELLAFLREPLREVCASHAGDLMRSKFAGDLVLQEAIRAIGTLQVVQAVAEAACAKPLEMQLPMYEDPAGHLFMKQLLKREAEAQQAAATGDDSGATASTSWFADALLQHADGALATWAGSNRGAFVVSALEQVPSTSAGVRKAFEAKAARAKLVKDAKAGSTMGVKVLAEQLGFGDFGAKEAAA 1722
+ERLS+ +E+E HI +LSQLTY+H IV RLFK+IKGAE QKR+AKTFRG TV+LATHAIGA VVQTAL SLP ASA LIKSEFYGKE+ALF D QPHSLKAVL++RPDRR VVM HV+GVI KL++K LMKF+FAH+LLWEY QEA+PVQMQELVPQLV+SY++LLSTRPGSMAAAMCAAHGGAKERKRMMR+ KG VA +L+HRD+Y+AV+RLVESVDDT+TCQK ILAELLKP +V P+ A SVPK KG+SAEEWVPRGTT PKGN + GV A G+G V+GM+ XXXXX E +A+ A S ++ VM + GCK+LLRLLAP+HTGYLHPEEL++LKPTMVP+PA PK G EG PLVPSS+KEASVRRRELLAFLREPLRE CA+HA LMRSK AG +VL EAIRAIGT QVV AV +AAC KP +LPM+EDP+ HLFMKQLL+REAEAQ+A D + T+ T FADALL+ A G L+ W +NRGAFVV+AL +VPST A VR+ KAARA+LV +A G+ MG KVLAE+LGFGDFGAKEAAA
Sbjct: 209 EERLSILTEIEGHIAQLSQLTYAHFIVLRLFKEIKGAEEQKRVAKTFRGQTVKLATHAIGARVVQTALDSLPVASAALIKSEFYGKEYALFTDDNQPHSLKAVLKARPDRRAVVMAHVNGVIAKLLSKGLMKFEFAHDLLWEYMQEATPVQMQELVPQLVDSYILLLSTRPGSMAAAMCAAHGGAKERKRMMRALKGYVAASLMHRDAYIAVIRLVESVDDTVTCQKAILAELLKPKEVTPKTTPAGNSVPKAGKGTSAEEWVPRGTTAPKGNSDGGVAAAGDG---VTGMDVEGEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEGDAMEXXXXXAAASPRLPLVGVMCHKNGCKLLLRLLAPDHTGYLHPEELELLKPTMVPSPAAXXXXXXXXXXXXXXXPKAGG-------EGTEVPLVPSSRKEASVRRRELLAFLREPLREACATHAPMLMRSKCAGSVVLLEAIRAIGTPQVVAAVVKAACGKPRVGKLPMHEDPSAHLFMKQLLEREAEAQKAKDGADSAADTSDTLSFADALLEKAGGQLSAWISTNRGAFVVTALAEVPSTGAAVREELGTKAARARLVMEATEGNNMGTKVLAERLGFGDFGAKEAAA 833
BLAST of mRNA_S-dermatodea_contig8109.16304.1 vs. uniprot
Match: D7FHP3_ECTSI (PUM-HD domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHP3_ECTSI) HSP 1 Score: 603 bits (1556), Expect = 1.150e-203 Identity = 360/610 (59.02%), Postives = 426/610 (69.84%), Query Frame = 1
Query: 1 QERLSLFSEMEEHIVELSQLTYSHHIVQRLFKDIKGAEGQKRLAKTFRGHTVRLATHAIGAEVVQTALSSLPTASATLIKSEFYGKEFALFDDGGQPHSLKAVLESRPDRRGVVMEHVHGVIVKLVAKSLMKFQFAHELLWEYFQEASPVQMQELVPQLVESYMILLSTRPGSMAAAMCAAHGGAKERKRMMRSFKGVVADALLHRDSYLAVMRLVESVDDTITCQKTILAELLKPLQVAPEDAKGSVPKPAKGSSAEEWVPRGTTGPKGNPEDGVPAGGEGDXXVSGMEXXXXXXXXXXKEPEAVAEGAVPA-------------------PPSM--LAVMKSRTGCKILLRLLAPEHTGY-----LHPEELDILKPTMVPAPAPKIAGA-------------ADGAAKEGAAPLVPSSKKEASVRRRELLAFLREPLREVCASHAGDLMRSKFAGDLVLQEAIRAIGTLQVVQAVAEAACAKPLEMQLPMYEDPAGHLFMKQLLKREAEAQQAAATGDDSGATASTSWFADALLQHADGALATWAGSNRGAFVVSALEQVPSTSAGVRKAFEAKAARAKLVKDAKAGSTMGVKVLAEQLGFGDFGAKE 1713
+ERLS+ +E+E HI +LSQLTY+H IV RLFK+IKGAE QKR+AKTFRG TV+LATHAIGA VVQTAL SLP ASA LIKSEFYGKE+ALF D QPHSLKAVL++RPDRR VVM HV+GVI KL++K LMKF+FAH+LLWEY QEA+PVQMQELVPQLV+SYM+LLSTRPGSMAAAMCAAHGGAKERKRMMR+ KG VA +L H D +V+ D + + T + VPK KG+SAEEWVPRGTT PKGNPE GV A G+G V+GM+ XXX PP + + VM GCK+LLRLLAP+ TGY LHPEEL++LKPTMVP+PA A G E PLVPSS+KEASVRRRELLA+LREPLRE CA++A LMRSK AG +VL EAIRAIGT ++V AV EAACAK +LPM+EDP+ HLFMKQLL+REAEAQ+A D + AT+ T FADALL+ A G L++W+ +NRG FVV+AL +VPST A VR+ K ARA+LVK+A G+ MG KVLAE+LGFGDFGA++
Sbjct: 210 EERLSILTEIEGHIAQLSQLTYAHFIVLRLFKEIKGAEEQKRVAKTFRGQTVKLATHAIGARVVQTALDSLPVASAALIKSEFYGKEYALFTDDNQPHSLKAVLKARPDRRAVVMAHVNGVITKLLSKGLMKFEFAHDLLWEYMQEATPVQMQELVPQLVDSYMLLLSTRPGSMAAAMCAAHGGAKERKRMMRALKGYVAASLTHSD-------VVKQADHLVAPKTTAAGNI--------------VPKAGKGTSAEEWVPRGTTAPKGNPERGVAAAGDG---VTGMDVEGEEKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPGLPLVYVMGHTNGCKLLLRLLAPDRTGYAFFRYLHPEELELLKPTMVPSPAAAXXXXXXXXXXXXXXXTKAGGQGTE--VPLVPSSRKEASVRRRELLAYLREPLREACATYAPMLMRSKCAGSVVLLEAIRAIGTPEIVAAVVEAACAKSHVGKLPMHEDPSAHLFMKQLLEREAEAQKAKGGADSAAATSDTPSFADALLEKAGGQLSSWSSTNRGGFVVTALAEVPSTGAAVREELGTKTARARLVKEATEGNNMGTKVLAERLGFGDFGARK 793
BLAST of mRNA_S-dermatodea_contig8109.16304.1 vs. uniprot
Match: A0A835Z7T9_9STRA (Armadillo-type protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7T9_9STRA) HSP 1 Score: 395 bits (1014), Expect = 7.480e-122 Identity = 277/610 (45.41%), Postives = 347/610 (56.89%), Query Frame = 1
Query: 16 LFSEMEEHIVELSQLTYSHHIVQRLFKDIKGAEGQKRLAKTFRGHTVRLATHAIGAEVVQTALSSLPTASATLIKSEFYGKEFALFDDGG---QPHSLKAVLESRPDRRGVVMEHVHGVIVKLVAKSLMKFQFAHELLWEYFQEASP-----VQMQELVPQLVESYMILLSTRPGSMAAAMCAAHGGAKERKRMMRSFKGVVADALLHRDSYLAVMRLVESVDDTITCQKTILAELLKPLQ------VAPEDAKGSVPKPAKGSSAEEWVPRGTTGPKGNPEDGVPA---GGEGDXXVSGMEXXXXXXXXXXK------------------------EPEAVAE----GAVPAP------------------------------PSMLAVMKSRTGCKILLRLLAPEHTGYLHPEELDILKPTMVPAPAPKIAGAADGAAKEGAAP-LVPSSKKEASVRRRELLAFLREPLREVCASHAGDLMRSKFAGDLVLQEAIRAIGTLQVVQAVAEAACAKPLEMQLPMYEDPAGHLFMKQLLKREAEAQQAAATGDDSGATASTSWFADALLQHAD----GALATWAGSNRGAFVVSALEQVPSTSAGVRKAFE 1605
+ +E+E H+VELSQL Y+H IV +L + +GAE Q+R+ K RGH +LATH+IGA V+Q A+ LP+A A +++E YG E ALF D P +LK V+ RPDRR +V+E V + K+ K L+ F FAH LLWEY E + + ++VP +++ YM LLSTR GS AAA+CAA+G AK+RKRMM+ FKG V +L+HRD+YLAV+RLV SVDDT+TCQK++LAELL PL V A G+ KP +G +AE WVP+G G E V GGE D + XXXXXXXXX E EA AE AV A P++L V R GCK+LL L AP+ T YL PEE +L+P MVP A G EG AP LV +SKK+ VRR+ELLAFL+ PL+ +C H +LMRSKFAG VL E + + T +V A+A AA A P E L M EDPAGHLFMKQLL E E Q +G WFADALL+ G L WAGSNRGAFV++AL VPS A VRKA +
Sbjct: 230 ILTELEGHLVELSQLQYAHFIVLKLLQRARGAEEQRRVTKDLRGHVAKLATHSIGARVIQQAMDMLPSARAAQLRAELYGPEHALFADMAFDKAPRNLKQVIALRPDRRAIVLEGVKRTLGKIAQKGLLSFAFAHSLLWEYMSEVNVNSDGGAAIADMVPTVIDGYMALLSTRDGSRAAALCAAYGSAKDRKRMMKGFKGFVGTSLMHRDAYLAVLRLVASVDDTVTCQKSVLAELLVPLPRPVAAAVTGVTASGAAVKPGEGVTAEAWVPKGVARSSGTGEAVVEDDEDGGEFDGMTDEFDGXXXXXXXXXXXXXXXXXXXXXQQDEAEESDIEAGEDEAAAEEETTDAVGAQGDADTSAQAALXXXXXXXXXXXXXXXXXXAPALLPVSLHRNGCKLLLYLAAPDATKYLDPEERHLLEPAMVPV--------AQG---EGEAPVLVCASKKDPEVRRQELLAFLKAPLQSLCQEHTAELMRSKFAGANVLLEVTKNLRTPDLVAAIAAAAVAVPEEGHLAMQEDPAGHLFMKQLLLWEGE-QXXXXXXXXAG------WFADALLKRLQAGDGGGLRGWAGSNRGAFVLAALAGVPSAGAAVRKALK 821
BLAST of mRNA_S-dermatodea_contig8109.16304.1 vs. uniprot
Match: A0A7S2FGZ7_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FGZ7_9STRA) HSP 1 Score: 199 bits (505), Expect = 5.240e-51 Identity = 177/554 (31.95%), Postives = 269/554 (48.56%), Query Frame = 1
Query: 4 ERLSLFSEMEEHIVELSQLTYSHHIVQRLFKDIKGAEG--QKRLAKTFRGHTVRLATHAIGAEVVQTALSSLPTASATLIKSEFYGKEFALFDDG-----------GQPHSL-KAVLESRPDRRGVVMEHVHGVIVKLVAKSLMKFQFAHELLWEYFQEASPVQMQELVPQLVESYMILLSTRPGSMAAAMCAAHGGAKERKRMMRSFKGVVADALLHRDSYLAVMRLVESVDDTITCQKTILAELLKPLQVAPEDAKGSVPKPAK---GSSAEEWVPRGTTGPKGNPEDGVPAGGEGDXXVSGMEXXXXXXXXXXKEPEAVAEGAVPAPPSMLAVMKSRTGCKILLRLLAPEHTGYLHPEELDILKPTMVPAPAPKIAGAADGAAKEGAAPLVPSSKKEASVRRRELLAFLREPLREVCASHAGDLMRSKFAGDLVLQEAIRAI--GTLQVVQAVAEAACAKPLEM-QLPMYEDPAGHLFMKQLLKREAEAQQAAATGDDSGATAST--SWFADALLQHADGALATWAG-SNRGAFVVSALEQVPSTSAGVRK 1596
+RL + E+ +VELS+ TY+H +V +L D+ + Q++L K RG+ +AT A+ A +V+ AL +L +A ++ E YGKE+ +F D GQ +S+ A+L +P + ++E + + K V K L+ F++ HELL E+ QM EL+P ++ + ++LLSTRPG+ AK+R++ +++ KG L HRD+YLAV+R+V+ +DDT+ Q+++LAEL A D K S G +A + +GT + +D GD S A P P +L V G K+LLRLLAP YL P ++ L G A+G +SKK RR ELLA+L+ PL +C + L+ S G +L E ++ + AVA+ C+K + P+++ LF+K+ L+ E Q D G T S A AL++ A G L+ W SNRGAFVV AL +VP+ SA VRK
Sbjct: 142 QRLDIMGEVAPRLVELSRSTYAHFVVVKLL-DLADRDPKLQQQLHKALRGNIRMMATSAVAARIVELALGNLK--NAFTLRLELYGKEYGVFTDEALSKTPAYDAKGQRNSIVAAILALKPQSKPGLLEGLAVLCGKFVKKGLLAFEYVHELLDEFVGHCDEAQMAELLPSILNNALVLLSTRPGTRVVVAALGLSIAKDRRKFLKALKGHGVQLLTHRDAYLAVLRIVDVMDDTVALQRSLLAELTTR---ATSDGKISANPSLDADGGKAALASMGKGTQPNTDDVDDDDSCPAAGDTTAS----------------------AGPMP--LLDVALHTNGSKMLLRLLAPTKEKYLDPWDITALS-----------GGVAEG-----------TSKKAPETRRGELLAYLQAPLLALCEENPATLITS-IPGSNILLEIFASMPDDVATLAAAVAKCVCSKAEDGGTAPLFDQKVVQLFLKRALQLEIGGQSVEGRADGEGERHDTHPSSLARALVETASGELSDWCTQSNRGAFVVEALLKVPAVSAAVRK 642
BLAST of mRNA_S-dermatodea_contig8109.16304.1 vs. uniprot
Match: A0A7S1TQU4_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TQU4_9STRA) HSP 1 Score: 181 bits (460), Expect = 1.570e-46 Identity = 153/487 (31.42%), Postives = 239/487 (49.08%), Query Frame = 1
Query: 205 SSLPTASATLIKSEFYGKEFALF----------DDGGQPHSLKAVLESRPDRRGVVMEHVHGVIVKLVAKSLMKFQFAHELLWEYFQEASPVQMQELVPQLVESYMILLSTRPGSMAAAMCAAHGGAKERKRMMRSFKGVVADALLHRDSYLAVMRLVESVDDTITCQKTILAELLKPLQVAPEDAKGSVPKPAKGSSAEEWVPRGTTGPKGNPEDGVPAGGEGDXXVSGMEXXXXXXXXXXKEPEAVAEGAVPAPPSMLAVMKSRTGCKILLRLLAPEHTGYLHPEELD-ILKPTMVPAP-APKIAGAADGAAKEGAAPLVPSSKKEASVRRRELLAFLREPLREVCASHAGDLMRSKFAGDLVLQEAIR---AIGTLQVVQ--------AVAEAACAKPLEMQLPMYEDPAGHLFMKQLLKREAEAQQAAATGDDSGATASTSWFADALLQHADGALATWAGSNRGAFVVSALEQVPSTSAGVRK 1596
+ LP A + ++ E +G+E L D+G H+L+ +L RPDRR V++ + ++ K+V K L +F + ELL EY + A P Q+ + P L E ++LL++R G+ AAA+ AA+GGA+ERKRM ++ KG V L HRD+Y+A+++LV+ DDT++ +K IL E+ +VA + ++ EE TT EA+A A A + L LLAP++ Y H ++ ++ P+ +P P A +I + D + + +A V +SKKE RRRELL++LR+PL ++CA HA ++R + L+ + A R A ++V+ A E + + LP++EDP GHL +K L EA+ +D +S AD D L + G NRG FV+ AL +VP+ AGV K
Sbjct: 1 AELPKADSRALRQELFGREHVLATASTGERKRGDEGA--HTLRGLLTLRPDRREVILTKLWALLQKMVDKQLCQFVYVQELLCEYLECAGPAQVAKAAPALAEHAIMLLTSREGARAAALVAAYGGARERKRMTKALKGHVKATLHHRDAYIALLKLVDVTDDTVSTKKNILPEIF---EVAEQQYT---------ATGEENAAEFTT-------------------------------------EALATSAPTA--------------QFFLWLLAPDNKRYFHEMDMKALMAPSQLPPPGAEEIPLSVDPDSVDTSA-WVSTSKKEPEQRRRELLSYLRQPLIDLCAEHAAVMLRRPYGSKLLFEVARRWRPAAVHARIVEELTKEPEGAAEEDEGEEEAKPTLPLWEDPKGHLTVKWLFISEAK------DDEDGEGEEGSSLAADFTADLNDELLLKYMGCNRGCFVIEALVKVPAVRAGVIK 415
BLAST of mRNA_S-dermatodea_contig8109.16304.1 vs. uniprot
Match: K0QZQ0_THAOC (CPL domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0QZQ0_THAOC) HSP 1 Score: 184 bits (467), Expect = 2.620e-46 Identity = 167/555 (30.09%), Postives = 256/555 (46.13%), Query Frame = 1
Query: 31 EEHIVELSQLTYSHHIVQRLFKD-IKGAEGQKRLAKTFRGHTVRLATHAIGAEVVQTALSSLPTASATLIKSEFYGKEFALF-----DDGGQPHSLK---AVLESRPDRRGVVMEHVHGVIVKLVAKSLMKFQFAHELLWEYFQEASPVQMQE-LVPQLVESYMILLSTRPGSMAAAMCAAHGGAKERKRMMRSFKGVVADALLHRDSYLAVMRLVESVDDTITCQKTILAELLKPLQVAPEDAKGSVPKPAKGSSAEEWVPRGTTGPKGNPEDGVPAGGEGDXXVSGMEXXXXXXXXXXKEPEAVAEGAVPAPPSMLAVMKSRTGCKILLRLL---------------APEHTGYLHPEELDIL--KPTMVPAPAPKIAGAADGAAKEGAAPLVPSSKKEASVRRRELLAFLREPLREVCASHAGDLMRSKFAGDLVLQEAIRAIGTLQVVQAVAEAACAKP--LEMQLPMYEDPAGHLFMKQLLKREAEAQQAAATGDDSGATASTSWFADALLQHADGALATWAGSNRGAFVVSALEQVPSTSAGVRKAFEA 1608
++++ EL ++ Y+H +V ++ K + AE K + + + +LA H++G+ VV+ ++ P S +K E YG ++ALF G +SL A +E P ++G +EH+ ++ K + KSL F + H LL +Y A P ++ L P L E + LLSTR G+ C A+ K+RK+M++ KG +LLHRD+YLAV+R+V+ +DDT+ KT+LAEL + +DA V G + P +L +++S TG K+ L LL +P+ YL P E+ +L PT+ +E P VP+SKKE RR ELL ++R+ L EVC HA +MR+K+ G VL E + ++ AV A + L MYEDP GHL +K L E E DD + + +FA+ + A+AT +NRGAFV+SAL + A V+KA +A
Sbjct: 118 QQNLGELCKIQYAHFVVLKIIKYCFRDAECVKMVVRALKKQMTKLAVHSVGSRVVELLFATFPAKSIAPLKLELYGPQYALFATSVPSGNGASNSLPSLAAFVEENPTKQGATLEHLQLLLQKGLDKSLTGFGYFHNLLLDYTSIAKPNDIRSFLTPALAEHSLHLLSTRAGTKVVCECFAYATVKDRKKMIKCLKGYARSSLLHRDAYLAVLRMVDVMDDTVLLNKTLLAELHRNPDAEKDDAGDEV---------------------GREDQDSP---------------------------------------ILDLVQSDTGHKLFLLLLVSKNAKSTDNKSKKSSPKWMKYLDPYEVAVLHRSPTV----------------EENGEP-VPTSKKEDETRRSELLVYVRDLLSEVCTKHAQTMMRNKY-GSKVLLEVCENCPSEELFAAVVTACKQNDGNADDSLAMYEDPVGHLALKNLFLNECERDV-----DDDEPSIARLFFAE--FKEDMQAIAT---TNRGAFVLSALAKT-GVGADVKKALKA 583
BLAST of mRNA_S-dermatodea_contig8109.16304.1 vs. uniprot
Match: B5YP90_THAPS (RNA-binding protein of the pumilio family n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B5YP90_THAPS) HSP 1 Score: 184 bits (467), Expect = 6.840e-46 Identity = 172/586 (29.35%), Postives = 261/586 (44.54%), Query Frame = 1
Query: 40 IVELSQLTYSHHIVQRLFKDI-KGAEGQKRLAKTFRGHTVRLATHAIGAEVVQTALSSLPTASATLIKSEFYGKEFALF-------DDGGQPHSLKAVL-------ESRPDRRGVVMEHVHGVIVKLVAKSLMKFQFAHELLWEYFQEASPVQMQE-LVPQLVESYMILLSTRPGSMAAAMCAAHGGAKERKRMMRSFKGVVADALLHRDSYLAVMRLVESVDDTITCQKTILAELLKPLQVAPEDAKGSVPKPAKGSSAEEWVPRGTTGPKGNPEDGVPAGGEGDXXVSGMEXXXXXXXXXXKEPEAVAEGAVPAPPSMLAVMKSRTGCKILLRLLAPEHTG---------------YLHPEELDIL--KPTMVPAPAPKIAGAADGAAKEGAAPLVPSSKKEASVRRRELLAFLREPLREVCASHAGDLMRSKFAGDLVLQEAIRAIGTLQVVQAVAEAACAKPLEMQ---------LPMYEDPAGHLFMKQLLKREAEAQQAAATGDDSGATASTSWFADALLQHADGALATWAGSNRGAFVVSALEQVPSTSAGVRKAFEAKAARAKLVKDAKAGSTMGVKV 1671
+ EL ++ Y+H +V ++ K + + K + K+ R +LA H++G+ VV+ ++ P+ + +K E YG ++ALF DG S+ L E+ PD+ + H+ ++ K + K L F + H LL++Y ASP +++ L P L E + L+STR G+ CAA+G K+RK+M++ FKG +LLHRD+YLA++R+V+ +DDT+ K +LAEL + S PK XX P+P +L ++ S TG K+ YL P E+++L PT+ +G + VP+SKKE RR+EL+ +L+E L + C H +LMRSK AG VL EA + + ++ AV E CA +E LP+ EDP GHL +K L EA A DD T+ F D + L A +NRGAFV+SAL VPS V+K K ++ + AK G G K+
Sbjct: 155 LAELCKIQYAHFVVLKMIKYCARDEDSVKLIVKSLRKQMTKLAVHSVGSRVVELLFATFPSKATAPLKLELYGPQYALFATSNPTPTDGKSKSSISPTLPTLASFIETNPDKLESTLTHLQTLLQKGLDKHLTGFAYFHSLLFDYVSIASPNDIRDFLTPALAEHSLHLISTRAGTKVVCECAAYGSVKDRKKMLKCFKGYTRSSLLHRDAYLAILRMVDVMDDTVLVNKMLLAEL----------HQNSDPK-----------------------------------------------AXXXXXXXXXXXXXPSP--ILDLVLSDTGSKMFXXXXXXXXXXXXXXXXXXXXSKWQKYLDPYEIEVLHRNPTVTD----------NGES-------VPTSKKEDETRRQELVVYLKELLVDACVKHTEELMRSK-AGSKVLIEACESFPSEELYNAVLE-VCADSMENDSMDEEGGKALPILEDPVGHLTLKHLFLAEARNDSAGVDEDD---TSLARMFYDKFQSN----LGDIASTNRGAFVLSALIAVPSVKEDVKKTL--KGHTKEITQQAKKGGNDGKKL 653
BLAST of mRNA_S-dermatodea_contig8109.16304.1 vs. uniprot
Match: A0A7S2SB37_9STRA (Hypothetical protein (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2SB37_9STRA) HSP 1 Score: 180 bits (456), Expect = 1.920e-45 Identity = 135/448 (30.13%), Postives = 219/448 (48.88%), Query Frame = 1
Query: 4 ERLSLFSEMEEHIVELSQLTYSHHIVQRLFKD-IKGAEGQKRLAKTFRGHTVRLATHAIGAEVVQTALSSLPTASATLIKSEFYGKEFALFDDGGQPHS-------LKAVLESRPDRRGVVMEHVHGVIVKLVAKSLMKFQFAHELLWEYFQEASPVQMQELVPQLVESYMILLSTRPGSMAAAMCAAHGGAKERKRMMRSFKGVVADALLHRDSYLAVMRLVESVDDTITCQKTILAELLKPLQVAPEDAKGSVPKPAKGSSAEEWVPRGTTGPKGNPEDGVPAGGEGDXXVSGMEXXXXXXXXXXKEPEAVAEGAVPAPPSMLAVMKSRTGCKILLRLLAPEHTG---YLHPEELDILKPTMVPAPAPKIAGAADGAAKEGAAPLVPSSKKEASVRRRELLAFLREPLREVCASHAGDLMRSKFAGDLVLQEAIRAIGTLQVVQAV 1314
+RL + E+ I ELS++ Y+H + ++ K ++ + K + K+ +GH +L HA+GA VV+ L++ P +K E YG +FALF G S L+++++ +PD++ V ++++ +I K + KSL F + L EY SP +++ + P + + + LLSTR G+ A CAA+ KERKRMMRS KG +L H D+Y+A++RL++ DDT+T QK +L EL QV P K V S + V + N ++ P K P +L + S TG K+ L LL+ + Y P EL+ILKP P + + +P+SKK AS RR ELL +++ L E+C HA +L+ S+ G +L+E + ++ +++
Sbjct: 121 QRLIIVKELSSSISELSKVQYAHFAILKMIKYCVRNKDAMKIIVKSLKGHINKLCVHAVGARVVELLLATFPAKITAHLKLELYGPQFALFASGDLSASTSTNNPTLQSIIKEQPDKKEVAVQNILNIINKGIEKSLFSFAYFQRLFSEYVLAVSPNEIRAIAPSISDHAIHLLSTRSGARVVAECAAYSTPKERKRMMRSLKGYTRSSLKHADAYIALLRLIDVTDDTVTAQKLLLEEL----QVDPTAGKVKV-------SVDGTV-------EDNGDNNSP-----------------------KSP-------------ILEIALSDTGSKLFLMLLSKDEERRKKYFDPSELEILKPN------PTVLENGEQ---------IPTSKKNASTRRVELLRYMKNLLVELCTLHADELLFSR-PGSKILREVFETFPSKELSESI 498
BLAST of mRNA_S-dermatodea_contig8109.16304.1 vs. uniprot
Match: A0A7S4QEX1_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QEX1_9STRA) HSP 1 Score: 169 bits (428), Expect = 4.060e-41 Identity = 92/240 (38.33%), Postives = 143/240 (59.58%), Query Frame = 1
Query: 4 ERLSLFSEMEEHIVELSQLTYSHHIVQRLFKD-IKGAEGQKRLAKTFRGHTVRLATHAIGAEVVQTALSSLPTASATLIKSEFYGKEFALFDDGG------QPHSLKAVLESR-PDRRGVVMEHVHGVIVKLVAKSLMKFQFAHELLWEYFQEASPVQMQELVPQLVESYMILLSTRPGSMAAAMCAAHGGAKERKRMMRSFKGVVADALLHRDSYLAVMRLVESVDDTITCQKTILAEL 699
+R + E+ I EL++ Y+H +V +L K ++ E + + K+ +GH +LA HA+GA VV+ S+ P S TL+K E YG +F LF DG +L++V ++ P ++ +EHVHG++ K + K L F + L EY A+P ++ + P +V+ + +LSTR G+ A CAA+G K+RK +MRS KG +LLHRD+Y+AV+RL + VDDT+T K +L EL
Sbjct: 105 QRREIAKELGSKISELAKSQYAHFVVLKLIKYCVRDGEAVRLIVKSLKGHISKLAVHAVGARVVELLFSTFPPKSTTLLKQEMYGPQFTLFTDGALSGGTAASPTLQSVFKTATPSQKKSALEHVHGLLQKGIDKGLFGFTYYQSLFCEYVIAATPNDIRSIAPSVVDHSIHMLSTRAGARVVAECAAYGTVKDRKNIMRSLKGYTRSSLLHRDAYIAVLRLADVVDDTVTLDKNVLVEL 344
BLAST of mRNA_S-dermatodea_contig8109.16304.1 vs. uniprot
Match: B7G2A9_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G2A9_PHATC) HSP 1 Score: 168 bits (425), Expect = 1.270e-40 Identity = 171/574 (29.79%), Postives = 257/574 (44.77%), Query Frame = 1
Query: 46 ELSQLTYSHHIVQRLFKDIKGAEGQKRLA-KTFRGHTVRLATHAIGAEVVQTALSSLPTASATLIKSEFYGKEFALF----DDGGQPHSLKAVLESRPDRRGVVMEHVHGVIVKLVAKSLMKFQFAHELLWEYFQEASPVQMQELVPQLVESYMILLSTRPGSMAAAMCAAHGGAKERKRMMRSFKGVVADALLHRDSYLAVMRLVESVDDTITCQKTILAELLKPLQVAPEDAKGSVPKPAKGSSAEEWVPRGTTGPKGNPEDGVPAGGEGDXXVSGMEXXXXXXXXXXKEPEAVAEGAVPAPPSMLAVMKSRTGCKILLRLLA--PEHTG-YLHPEELDIL--KPTMVPAPAPKIAGAADGAAKEGAAPLVPSSKKEASVRRRELLAFLREPLREVCASHAGDLMRSKFAGDLVLQEAIRAIGTLQVVQAVAEAACAKPLEMQLP-----------MYEDPAGHLFMKQLL----KREAEAQQAAATGDDSGATASTSWFADALLQHADGALATWAGSNRGAFVVSALEQVPSTSAGVRKAFEAKAARAKLVK--DAKAGSTMGVKVLAEQL 1686
EL + Y+H + K +L K +GH RLA HA+G+ VVQ+ S++ + ++K EFYG FALF +L + P+++ + V +I K + K+L F + +L EY + A P +++ L ++ + LLS R G+ A ++G AK+RKR+M+S KG LLH D+YLA++RLV+ DDT++ K I ELL P + E+ S P +L + S TG K+LL LL PE + P EL +L PT++ DG V +SKKE +RR+EL+ +LREPL E+CA A +L+RS+ G LVL+E + + VV+A+ C L ++ED GHL +K LL +E+EA+ A+A + F D L++ A SNRGAFV++AL +V + VRK +K +A+L K D K G+T G K L ++
Sbjct: 140 ELCKSQYAHFCALKAIKYCHSDPASVKLINKALKGHMPRLAVHAVGSRVVQSIFSTMTPKQSAVLKQEFYGPHFALFALDLPRNDAVPTLATNIAEAPEKKEATLIFVRNLINKGMEKTLYGFTYFQDLFAEYCEVADPREIRILAGTAADNSIHLLSGRAGTRVVASLISYGTAKDRKRIMKSLKGYTKSGLLHHDAYLAIIRLVQLTDDTVSIHKNIFNELLLPSDKSDEEL--SCP-------------------------------------------------------------------LLELALSDTGSKLLLMLLVADPETLKKFFDPYELSVLFENPTVID----------DGQE-------VLTSKKEPEIRRKELIKYLREPLIEMCAKSANELIRSR-PGALVLREVYHSYRPISVVEAIV-GTCQAALNQDSSKGDEKDVQNYRLFEDRDGHLAVKNLLLADSAKESEAKLASAFFET---------FQDRLMEIAQ--------SNRGAFVITALCKVLA----VRKGAISKLNQAQLKKLADGK-GATAGFKALVNEM 603 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig8109.16304.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig8109.16304.1 >prot_S-dermatodea_contig8109.16304.1 ID=prot_S-dermatodea_contig8109.16304.1|Name=mRNA_S-dermatodea_contig8109.16304.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=583bp MEEHIVELSQLTYSHHIVQRLFKDIKGAEGQKRLAKTFRGHTVRLATHAIback to top mRNA from alignment at S-dermatodea_contig8109:596..9014- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig8109.16304.1 ID=mRNA_S-dermatodea_contig8109.16304.1|Name=mRNA_S-dermatodea_contig8109.16304.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=8419bp|location=Sequence derived from alignment at S-dermatodea_contig8109:596..9014- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig8109:596..9014- >mRNA_S-dermatodea_contig8109.16304.1 ID=mRNA_S-dermatodea_contig8109.16304.1|Name=mRNA_S-dermatodea_contig8109.16304.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=3498bp|location=Sequence derived from alignment at S-dermatodea_contig8109:596..9014- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |