prot_S-dermatodea_contig80939.16285.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig80939.16285.1
Unique Nameprot_S-dermatodea_contig80939.16285.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length78
Homology
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BLAST of mRNA_S-dermatodea_contig80939.16285.1 vs. uniprot
Match: A0A6H5K075_9PHAE (DUF4470 domain-containing protein (Fragment) n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K075_9PHAE)

HSP 1 Score: 123 bits (308), Expect = 6.370e-31
Identity = 60/77 (77.92%), Postives = 68/77 (88.31%), Query Frame = 0 
Query:    2 LINTLHCCFVRVHRGSGSFPPQDLEGEPWYVVKDRLLRVKETKPDDPEAELMVSFLLASKTLVTANAATDVELELRL 78
            LI+TLHCCFVRV+RGSG FP +D EGEPWYV+++RLLRVKET PDDPEAELMVSFLL SKTL+ ANA   +ELELRL
Sbjct:  823 LISTLHCCFVRVNRGSGPFPLEDKEGEPWYVLRERLLRVKETVPDDPEAELMVSFLLGSKTLIPANA-NQIELELRL 898
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig80939.16285.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5K075_9PHAE6.370e-3177.92DUF4470 domain-containing protein (Fragment) n=2 T... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig80939contigS-dermatodea_contig80939:518..751 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig80939.16285.1mRNA_S-dermatodea_contig80939.16285.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig80939 518..763 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig80939.16285.1 ID=prot_S-dermatodea_contig80939.16285.1|Name=mRNA_S-dermatodea_contig80939.16285.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=78bp
MLINTLHCCFVRVHRGSGSFPPQDLEGEPWYVVKDRLLRVKETKPDDPEA
ELMVSFLLASKTLVTANAATDVELELRL
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