mRNA_S-dermatodea_contig809.16282.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig809.16282.1 vs. uniprot
Match: D8LMQ6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMQ6_ECTSI) HSP 1 Score: 181 bits (458), Expect = 8.490e-56 Identity = 86/125 (68.80%), Postives = 104/125 (83.20%), Query Frame = 3
Query: 51 MSQAANGINDVLETLGNQLKLLEEEIKIDEAGKQEFERLLAQLEEKKRDVENRIKVNEQWAASFDTDLGPFEELYRAKTREIASIYGDAKTRHKEGIKVLVDGFGYHPEFFRPQDYFHASPFVPK 425
M++ A+GI VLETL N+LK EEEIK DEAGK EFER L+QL EKKR++E+RI N +W ASFD DLGPF ++Y+AKT+EIASIY DAK RH+EG+KVLV+ F YHPEFFRP+D FHA+PFVPK
Sbjct: 1 MNRCASGIKGVLETLANKLKQQEEEIKADEAGKLEFERRLSQLREKKREIESRIDANMRWTASFDQDLGPFAKMYKAKTKEIASIYDDAKARHREGVKVLVNEFNYHPEFFRPKDGFHATPFVPK 125
BLAST of mRNA_S-dermatodea_contig809.16282.1 vs. uniprot
Match: K3WTT7_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WTT7_GLOUD) HSP 1 Score: 113 bits (282), Expect = 8.340e-26 Identity = 54/133 (40.60%), Postives = 84/133 (63.16%), Query Frame = 3
Query: 27 VTIKHFRGMSQAANGINDVLETLGNQLKLLEEEIKIDEAGKQEFERLLAQLEEKKRDVENRIKVNEQWAASFDTDLGPFEELYRAKTREIASIYGDAKTRHKEGIKVLVDGFGYHPEFFRPQDYFHASPFVPK 425
++ K M++A +GI VL+ L ++ +L+ EIK DE GKQ+++ L +L +++ D+E +++ ++ W A F++ + P E Y T + S Y DAK RH +GI+VL+D F YHPEF R D F A PF PK
Sbjct: 1143 MSAKDVSKMNRATSGIGGVLDNLQTKIDMLDREIKADEKGKQDYDDQLFRLRKRREDLEAKLRESQNWIALFESKIAPLEGKYAETTENMQSQYEDAKLRHAQGIRVLMDNFEYHPEFKRFSDTFSAVPFKPK 1275
BLAST of mRNA_S-dermatodea_contig809.16282.1 vs. uniprot
Match: A0A5D6XS68_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XS68_9STRA) HSP 1 Score: 110 bits (275), Expect = 7.310e-25 Identity = 53/125 (42.40%), Postives = 81/125 (64.80%), Query Frame = 3
Query: 51 MSQAANGINDVLETLGNQLKLLEEEIKIDEAGKQEFERLLAQLEEKKRDVENRIKVNEQWAASFDTDLGPFEELYRAKTREIASIYGDAKTRHKEGIKVLVDGFGYHPEFFRPQDYFHASPFVPK 425
M++A++G+ VLETL ++ LE EI+ DE GKQ+++ L +L +++ D++ +++ ++ W A FD + P E Y T + + Y DAK RH +G++VLVD F YHPEF R D F A PF PK
Sbjct: 1246 MNRASSGLGGVLETLELRIDTLEREIRADEKGKQDYDDQLFRLGQRRADLDAKLRESQDWIALFDRSIKPLEGKYSETTGHMQAQYEDAKLRHAQGVRVLVDNFDYHPEFKRFSDTFSAVPFKPK 1370
BLAST of mRNA_S-dermatodea_contig809.16282.1 vs. uniprot
Match: A0A662WQL8_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WQL8_9STRA) HSP 1 Score: 101 bits (252), Expect = 3.140e-24 Identity = 51/130 (39.23%), Postives = 76/130 (58.46%), Query Frame = 3
Query: 36 KHFRGMSQAANGINDVLETLGNQLKLLEEEIKIDEAGKQEFERLLAQLEEKKRDVENRIKVNEQWAASFDTDLGPFEELYRAKTREIASIYGDAKTRHKEGIKVLVDGFGYHPEFFRPQDYFHASPFVPK 425
K R M++ +GI LE + + L EIK DE GKQ+++ L +L ++++D+E ++ +W+A F++ + P Y T + Y DAK RH +GIKVL++ F YHPEF R D F A PF PK
Sbjct: 26 KDARKMNRVTSGIGGALEGVQMTINQLNREIKADEKGKQDYDDQLFRLNQRRKDMEAKLLECREWSALFESKIKPLAGKYTETTDNMQGQYEDAKLRHAQGIKVLIENFDYHPEFKRFSDTFSAVPFKPK 155
BLAST of mRNA_S-dermatodea_contig809.16282.1 vs. uniprot
Match: D0MXB1_PHYIT (Uncharacterized protein n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0MXB1_PHYIT) HSP 1 Score: 97.4 bits (241), Expect = 1.430e-22 Identity = 48/125 (38.40%), Postives = 75/125 (60.00%), Query Frame = 3
Query: 51 MSQAANGINDVLETLGNQLKLLEEEIKIDEAGKQEFERLLAQLEEKKRDVENRIKVNEQWAASFDTDLGPFEELYRAKTREIASIYGDAKTRHKEGIKVLVDGFGYHPEFFRPQDYFHASPFVPK 425
M++ +GI LE + +++ L EIK DE GK++++ L +L E+++D+E ++K +W+A F++ + P Y T + Y +AK RH +GI VL+ F YHPEF R D F A PF PK
Sbjct: 32 MNRVTSGIGGALEGVQMRIETLTREIKADEKGKKDYDEQLFRLNERRKDLEAKLKECREWSALFESKIKPLAGKYTETTDSMQGQYDEAKQRHAQGIIVLMQNFDYHPEFKRFSDTFTAVPFKPK 156
BLAST of mRNA_S-dermatodea_contig809.16282.1 vs. uniprot
Match: A0A3R7NIL5_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7NIL5_9STRA) HSP 1 Score: 99.4 bits (246), Expect = 2.410e-22 Identity = 48/125 (38.40%), Postives = 76/125 (60.80%), Query Frame = 3
Query: 51 MSQAANGINDVLETLGNQLKLLEEEIKIDEAGKQEFERLLAQLEEKKRDVENRIKVNEQWAASFDTDLGPFEELYRAKTREIASIYGDAKTRHKEGIKVLVDGFGYHPEFFRPQDYFHASPFVPK 425
M++ +GI +E++ ++ +L EIK DE GKQE++ L +L +++ D+E +++ +W+A F++ + P Y T + Y DAK RH +GI VL++ F YHPEF R D F A PF PK
Sbjct: 128 MNRVTSGIGGAVESVQMKIGMLGREIKADEKGKQEYDEQLFRLNQRRSDLEAKLREAREWSALFESKIKPLAGKYAETTDGMQDQYNDAKLRHAQGIAVLMENFDYHPEFKRFSDTFSAVPFRPK 252
BLAST of mRNA_S-dermatodea_contig809.16282.1 vs. uniprot
Match: H3GTU1_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GTU1_PHYRM) HSP 1 Score: 101 bits (251), Expect = 1.190e-21 Identity = 47/125 (37.60%), Postives = 78/125 (62.40%), Query Frame = 3
Query: 51 MSQAANGINDVLETLGNQLKLLEEEIKIDEAGKQEFERLLAQLEEKKRDVENRIKVNEQWAASFDTDLGPFEELYRAKTREIASIYGDAKTRHKEGIKVLVDGFGYHPEFFRPQDYFHASPFVPK 425
M++ +GI L+++ ++++L EIK DE GK++++ LL +L E++RD++ +++ +W+ F++ + P Y T + Y DAK RH +GI VL++ F YHPEF R D F A PF PK
Sbjct: 1039 MNRVTSGIGGALDSVQMRIEMLTREIKADEKGKKDYDELLFRLNERRRDLDAKLRECREWSTLFESKIKPLAGKYAETTDGMQGQYNDAKLRHAQGITVLMENFDYHPEFKRFSDTFSAVPFKPK 1163
BLAST of mRNA_S-dermatodea_contig809.16282.1 vs. uniprot
Match: A0A662WW89_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WW89_9STRA) HSP 1 Score: 101 bits (251), Expect = 1.200e-21 Identity = 51/130 (39.23%), Postives = 76/130 (58.46%), Query Frame = 3
Query: 36 KHFRGMSQAANGINDVLETLGNQLKLLEEEIKIDEAGKQEFERLLAQLEEKKRDVENRIKVNEQWAASFDTDLGPFEELYRAKTREIASIYGDAKTRHKEGIKVLVDGFGYHPEFFRPQDYFHASPFVPK 425
K R M++ +GI LE + + L EIK DE GKQ+++ L +L ++++D+E ++ +W+A F++ + P Y T + Y DAK RH +GIKVL++ F YHPEF R D F A PF PK
Sbjct: 1101 KDARKMNRVTSGIGGALEGVQMTINQLSREIKADEKGKQDYDDQLFRLNQRRQDMEAKLLECREWSALFESKIKPLAGKYAETTDSMQGQYEDAKLRHAQGIKVLIENFDYHPEFKRFSDTFSAVPFKPK 1230
BLAST of mRNA_S-dermatodea_contig809.16282.1 vs. uniprot
Match: A0A3F2RXA1_9STRA (Uncharacterized protein n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RXA1_9STRA) HSP 1 Score: 99.4 bits (246), Expect = 5.570e-21 Identity = 48/125 (38.40%), Postives = 76/125 (60.80%), Query Frame = 3
Query: 51 MSQAANGINDVLETLGNQLKLLEEEIKIDEAGKQEFERLLAQLEEKKRDVENRIKVNEQWAASFDTDLGPFEELYRAKTREIASIYGDAKTRHKEGIKVLVDGFGYHPEFFRPQDYFHASPFVPK 425
M++ +GI +E++ ++ +L EIK DE GKQE++ L +L +++ D+E +++ +W+A F++ + P Y T + Y DAK RH +GI VL++ F YHPEF R D F A PF PK
Sbjct: 1013 MNRVTSGIGGAVESVQMKIGMLGREIKADEKGKQEYDEQLFRLNQRRSDLEAKLREAREWSALFESKIKPLAGKYAETTDGMQDQYNDAKLRHAQGIAVLMENFDYHPEFKRFSDTFSAVPFRPK 1137
BLAST of mRNA_S-dermatodea_contig809.16282.1 vs. uniprot
Match: L1I9C8_GUITC (Uncharacterized protein (Fragment) n=2 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1I9C8_GUITC) HSP 1 Score: 88.2 bits (217), Expect = 1.390e-19 Identity = 40/100 (40.00%), Postives = 65/100 (65.00%), Query Frame = 3
Query: 123 EIKIDEAGKQEFERLLAQLEEKKRDVENRIKVNEQWAASFDTDLGPFEELYRAKTREIASIYGDAKTRHKEGIKVLVDGFGYHPEFFRPQDYFHASPFVP 422
EIK DE G +++E + +L+++K ++ RI N++WAA +D + GPF Y +++ +Y +AK +H +G+K+L++ F YHPEF R D F A PF P
Sbjct: 4 EIKADEKGIEDYEGEILRLKQRKEFLKKRIVQNQEWAAHYDKEFGPFVAKYDEFMKQMDVLYKNAKVKHADGLKLLMEHFDYHPEFKRWSDTFSAVPFKP 103 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig809.16282.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig809.16282.1 >prot_S-dermatodea_contig809.16282.1 ID=prot_S-dermatodea_contig809.16282.1|Name=mRNA_S-dermatodea_contig809.16282.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=137bp MAPVTIKHFRGMSQAANGINDVLETLGNQLKLLEEEIKIDEAGKQEFERLback to top mRNA from alignment at S-dermatodea_contig809:12667..14680+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig809.16282.1 ID=mRNA_S-dermatodea_contig809.16282.1|Name=mRNA_S-dermatodea_contig809.16282.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=2014bp|location=Sequence derived from alignment at S-dermatodea_contig809:12667..14680+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig809:12667..14680+ >mRNA_S-dermatodea_contig809.16282.1 ID=mRNA_S-dermatodea_contig809.16282.1|Name=mRNA_S-dermatodea_contig809.16282.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=822bp|location=Sequence derived from alignment at S-dermatodea_contig809:12667..14680+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |