mRNA_S-dermatodea_contig808.16272.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_S-dermatodea_contig808.16272.1
Unique Name	mRNA_S-dermatodea_contig808.16272.1
Type	mRNA
Organism	Saccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)

Homology

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BLAST of mRNA_S-dermatodea_contig808.16272.1 vs. uniprot
Match: A0A6H5J9G6_9PHAE (Tup_N domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9G6_9PHAE)

HSP 1 Score: 154 bits (390), Expect = 1.330e-43
Identity = 94/128 (73.44%), Postives = 104/128 (81.25%), Query Frame = 1

Query:    1 MAGSLALA-----QPSKSVAAFRSLELCDRLKLEIGNITAEIGQHQEEREEYEKKFRQQLLEMDRIQHSLKQLQENHMVMKQQYEDEIVRLRHKLDLSQG--DHPEGRGGG--NSTAGVSGGMSMGST 357
            MAG++A A     Q S+SVA FRSLELCD LKLEIGNIT+++GQHQEEREEYEKKFRQQL EMDRIQHSLKQLQE HMVMKQQYEDEIVRLRH+L+ S      P+ R GG  +S  GVSGGMSMGST
Sbjct:    1 MAGTVAAAAGAGAQQSESVAVFRSLELCDLLKLEIGNITSQMGQHQEEREEYEKKFRQQLAEMDRIQHSLKQLQEAHMVMKQQYEDEIVRLRHQLESSHPLKSDPDSRVGGVGSSVQGVSGGMSMGST 128

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BLAST of mRNA_S-dermatodea_contig808.16272.1 vs. uniprot
Match: D8LEC5_ECTSI (Tup_N domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEC5_ECTSI)

HSP 1 Score: 156 bits (395), Expect = 6.260e-42
Identity = 95/128 (74.22%), Postives = 103/128 (80.47%), Query Frame = 1

Query:    1 MAGSLALA-----QPSKSVAAFRSLELCDRLKLEIGNITAEIGQHQEEREEYEKKFRQQLLEMDRIQHSLKQLQENHMVMKQQYEDEIVRLRHKLDLSQG--DHPEGRGGG--NSTAGVSGGMSMGST 357
            MAG++A       Q SKSVA FRSLELCD LKLEIGNIT+E+GQH EEREEYEKKFRQQL EMDRIQHSLKQLQE HMVMKQQYEDEIVRLRH+L+ S      P+ RGGG  +S  GVSGGMSMGST
Sbjct:   53 MAGTVATVAAAGGQQSKSVAVFRSLELCDLLKLEIGNITSEMGQHLEEREEYEKKFRQQLAEMDRIQHSLKQLQEAHMVMKQQYEDEIVRLRHQLESSHPLKSDPDSRGGGAGSSVQGVSGGMSMGST 180

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BLAST of mRNA_S-dermatodea_contig808.16272.1 vs. uniprot
Match: UPI000644E48D (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI000644E48D)

HSP 1 Score: 60.8 bits (146), Expect = 1.610e-8
Identity = 31/78 (39.74%), Postives = 54/78 (69.23%), Query Frame = 1

Query:   52 RSLELCDRLKLEIGNITAEIGQHQEEREEYEKKFRQQLLEMDRIQHSLKQLQENHMVMKQQYEDEIVRLRHKLDLSQG 285
            R +EL D LK E+  +  EI  +++ ++EY++K + Q+ E+  IQ +L++L+  H   KQQYE+EI+RL+ +L+L+ G
Sbjct:   17 RVVELMDSLKNEVETLNHEISMYKQYKDEYDRKLQAQMQEITLIQQTLQELERGHARNKQQYEEEIIRLKKQLELTNG 94

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BLAST of mRNA_S-dermatodea_contig808.16272.1 vs. uniprot
Match: F4PP30_CAVFA (Transcriptional repressor TUP1 n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4PP30_CAVFA)

HSP 1 Score: 61.2 bits (147), Expect = 1.640e-8
Identity = 32/78 (41.03%), Postives = 53/78 (67.95%), Query Frame = 1

Query:   52 RSLELCDRLKLEIGNITAEIGQHQEEREEYEKKFRQQLLEMDRIQHSLKQLQENHMVMKQQYEDEIVRLRHKLDLSQG 285
            R+ EL D LK E  N+T ++   + +R+EY++KF  Q+ E+  +Q +L +L+  H  MKQQYE+EI+RL+  L+++ G
Sbjct:    5 RAPELIDNLKSEFENLTHDLVTLKHQRDEYDRKFAAQIQELQSMQQTLAELERQHQRMKQQYEEEIMRLKRLLEVNGG 82

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BLAST of mRNA_S-dermatodea_contig808.16272.1 vs. uniprot
Match: A0A1Y1YQS8_9FUNG (WD40 repeat-like protein n=2 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1YQS8_9FUNG)

HSP 1 Score: 59.7 bits (143), Expect = 5.830e-8
Identity = 33/82 (40.24%), Postives = 52/82 (63.41%), Query Frame = 1

Query:   61 ELCDRLKLEIGNITAEIGQHQEEREEYEKKFRQQLLEMDRIQHSLKQLQENHMVMKQQYEDEIVRLRHKLDLSQGDHPEGRG 306
            EL D LK+E   +  ++   + +R+E+E K   QL EM   Q +L +L+  H  +KQQYE+EI+RLR +L+ ++G HP+  G
Sbjct:   21 ELLDALKVEFEQVNQDVSMFKMQRDEFEHKISAQLNEMTGFQQNLYELERTHQKIKQQYEEEILRLRRELE-ARGSHPQSGG 101

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BLAST of mRNA_S-dermatodea_contig808.16272.1 vs. uniprot
Match: A0A662WIH0_9STRA (Tup_N domain-containing protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WIH0_9STRA)

HSP 1 Score: 58.9 bits (141), Expect = 1.090e-7
Identity = 33/82 (40.24%), Postives = 54/82 (65.85%), Query Frame = 1

Query:   28 PSKSVAAFRSLELCDRLKLEIGNITAEIGQHQEEREEYEKKFRQQLLEMDRIQHSLKQLQENHMVMKQQYEDEIVRLRHKLD 273
            P  + AA R  E+ D++K E      ++   + E+ E E+K + Q+LEMD+IQ +LK L+ NH  ++QQYED+++RLR +L+
Sbjct:   40 PQLATAASRVGEMLDQVKAEYEAAVQQLSMAKMEQLELERKIQSQVLEMDQIQQALKGLEANHRRLRQQYEDDLLRLRRQLE 121

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BLAST of mRNA_S-dermatodea_contig808.16272.1 vs. uniprot
Match: A0A662XMC3_9STRA (Tup_N domain-containing protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XMC3_9STRA)

HSP 1 Score: 58.9 bits (141), Expect = 1.090e-7
Identity = 33/82 (40.24%), Postives = 54/82 (65.85%), Query Frame = 1

Query:   28 PSKSVAAFRSLELCDRLKLEIGNITAEIGQHQEEREEYEKKFRQQLLEMDRIQHSLKQLQENHMVMKQQYEDEIVRLRHKLD 273
            P  + AA R  E+ D++K E      ++   + E+ E E+K + Q+LEMD+IQ +LK L+ NH  ++QQYED+++RLR +L+
Sbjct:   40 PQLATAASRVGEMLDQVKAEYEAAVQQLSMAKMEQLELERKIQSQVLEMDQIQQALKGLEANHRRLRQQYEDDLLRLRRQLE 121

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BLAST of mRNA_S-dermatodea_contig808.16272.1 vs. uniprot
Match: D3B1H0_POLPP (Transcriptional repressor TUP1 n=1 Tax=Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500) TaxID=670386 RepID=D3B1H0_POLPP)

HSP 1 Score: 58.2 bits (139), Expect = 1.970e-7
Identity = 30/78 (38.46%), Postives = 52/78 (66.67%), Query Frame = 1

Query:   52 RSLELCDRLKLEIGNITAEIGQHQEEREEYEKKFRQQLLEMDRIQHSLKQLQENHMVMKQQYEDEIVRLRHKLDLSQG 285
            R+ EL D L+ EI  +T E+  ++  +E+YE+K + QL E+  +Q +L  L+ +H  +KQQY++EI+RL+ +L+   G
Sbjct:    9 RATELLDSLRAEIDTLTHELNIYKHHKEDYERKLQSQLQEITLVQQTLVDLERSHNKIKQQYDEEIIRLKKQLEQVTG 86

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BLAST of mRNA_S-dermatodea_contig808.16272.1 vs. uniprot
Match: A0A1Y1YE88_9FUNG (WD40 repeat-like protein n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1YE88_9FUNG)

HSP 1 Score: 57.8 bits (138), Expect = 2.750e-7
Identity = 32/82 (39.02%), Postives = 50/82 (60.98%), Query Frame = 1

Query:   61 ELCDRLKLEIGNITAEIGQHQEEREEYEKKFRQQLLEMDRIQHSLKQLQENHMVMKQQYEDEIVRLRHKLDLSQGDHPEGRG 306
            EL D LK E   +  ++   + +R+E+E K   Q+ EM   Q +L +L+  H  +KQQYE+EI+RLR +L+  +G HP+  G
Sbjct:   21 ELLDALKAEFEQVNQDLSMFKMQRDEFEHKISAQISEMSSFQQNLYELERAHQKIKQQYEEEILRLRRELE-GRGGHPQSAG 101

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BLAST of mRNA_S-dermatodea_contig808.16272.1 vs. uniprot
Match: A0A7S0MGB8_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0MGB8_9CRYP)

HSP 1 Score: 55.5 bits (132), Expect = 3.780e-7
Identity = 34/92 (36.96%), Postives = 52/92 (56.52%), Query Frame = 1

Query:   37 SVAAFRSLELCDRLKLEIGNITAEIGQHQEEREEYEKKFRQQLLEMDRIQHSLKQLQENHMVMKQQYEDEIVRLRHKLDLSQGDHPEGRGGG 312
            S  A R  E+ D LK E   ++ E   ++ +R+E E+K   QL E+  +Q SL +L+  H+ +KQ YE+EI+RLR +L+        G G G
Sbjct:   58 SAVASRLPEVLDNLKSEFEQLSHEASVYKAQRDENERKLEAQLTELSLLQQSLGELERTHLKIKQNYEEEIMRLRRQLENGMQVESNGAGAG 149

The following BLAST results are available for this feature:

BLAST of mRNA_S-dermatodea_contig808.16272.1 vs. uniprot

BLAST of mRNA_S-dermatodea_contig808.16272.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5J9G6_9PHAE	1.330e-43	73.44	Tup_N domain-containing protein (Fragment) n=1 Tax...	[more]
D8LEC5_ECTSI	6.260e-42	74.22	Tup_N domain-containing protein n=1 Tax=Ectocarpus...	[more]
UPI000644E48D	1.610e-8	39.74	hypothetical protein n=1 Tax=Acytostelium subglobo...	[more]
F4PP30_CAVFA	1.640e-8	41.03	Transcriptional repressor TUP1 n=1 Tax=Cavenderia ...	[more]
A0A1Y1YQS8_9FUNG	5.830e-8	40.24	WD40 repeat-like protein n=2 Tax=Basidiobolus meri...	[more]
A0A662WIH0_9STRA	1.090e-7	40.24	Tup_N domain-containing protein n=1 Tax=Nothophyto...	[more]
A0A662XMC3_9STRA	1.090e-7	40.24	Tup_N domain-containing protein n=1 Tax=Nothophyto...	[more]
D3B1H0_POLPP	1.970e-7	38.46	Transcriptional repressor TUP1 n=1 Tax=Polysphondy...	[more]
A0A1Y1YE88_9FUNG	2.750e-7	39.02	WD40 repeat-like protein n=1 Tax=Basidiobolus meri...	[more]
A0A7S0MGB8_9CRYP	3.780e-7	36.96	Hypothetical protein (Fragment) n=1 Tax=Cryptomona...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
S-dermatodea_contig808	contig	S-dermatodea_contig808:9232..19461 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous	2021-02-24

Properties


Property Name	Value
Taxonomic scope	Eukaryota
Seed ortholog score	157.9
Seed ortholog evalue	2.9e-36
Seed eggNOG ortholog	2880.D8LEC5
Preferred name	TUP1
KEGG ko	ko:K06666,ko:K14963
KEGG Pathway	ko04011,ko04111,ko04934,map04011,map04111,map04934
GOs	GO:0000003,GO:0000122,GO:0000228,GO:0000429,GO:0000430,GO:0000433,GO:0000785,GO:0000790,GO:0000988,GO:0000989,GO:0001076,GO:0001191,GO:0001196,GO:0001198,GO:0003006,GO:0003674,GO:0005488,GO:0005515,GO:0005543,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005694,GO:0006323,GO:0006325,GO:0006333,GO:0006338,GO:0006342,GO:0006355,GO:0006357,GO:0006950,GO:0006970,GO:0006996,GO:0007154,GO:0007155,GO:0007530,GO:0007531,GO:0007532,GO:0007584,GO:0008150,GO:0008289,GO:0009267,GO:0009372,GO:0009405,GO:0009605,GO:0009607,GO:0009628,GO:0009651,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009987,GO:0009991,GO:0010033,GO:0010035,GO:0010038,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010565,GO:0010570,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0016043,GO:0016458,GO:0016584,GO:0017053,GO:0019216,GO:0019217,GO:0019219,GO:0019222,GO:0019747,GO:0019899,GO:0022414,GO:0022607,GO:0022610,GO:0030154,GO:0030447,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031497,GO:0031667,GO:0031668,GO:0031669,GO:0031670,GO:0031974,GO:0031981,GO:0032502,GO:0032879,GO:0032991,GO:0033554,GO:0033993,GO:0034728,GO:0035091,GO:0035690,GO:0035950,GO:0035952,GO:0035953,GO:0035955,GO:0036033,GO:0036166,GO:0036170,GO:0036171,GO:0036180,GO:0040007,GO:0040008,GO:0040029,GO:0042221,GO:0042304,GO:0042393,GO:0042493,GO:0042594,GO:0042826,GO:0043044,GO:0043156,GO:0043157,GO:0043167,GO:0043168,GO:0043207,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043486,GO:0043933,GO:0044085,GO:0044111,GO:0044114,GO:0044115,GO:0044182,GO:0044403,GO:0044409,GO:0044419,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044446,GO:0044451,GO:0044454,GO:0044464,GO:0044764,GO:0044877,GO:0045013,GO:0045014,GO:0045165,GO:0045814,GO:0045827,GO:0045833,GO:0045892,GO:0045893,GO:0045894,GO:0045926,GO:0045934,GO:0045935,GO:0045944,GO:0045990,GO:0046015,GO:0046677,GO:0046688,GO:0046890,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048869,GO:0050789,GO:0050794,GO:0050896,GO:0051049,GO:0051051,GO:0051171,GO:0051172,GO:0051173,GO:0051252,GO:0051253,GO:0051254,GO:0051276,GO:0051701,GO:0051704,GO:0051707,GO:0051716,GO:0051828,GO:0051832,GO:0051834,GO:0052173,GO:0060255,GO:0060258,GO:0061984,GO:0061985,GO:0061986,GO:0061987,GO:0062012,GO:0065007,GO:0070013,GO:0070784,GO:0070887,GO:0071103,GO:0071214,GO:0071236,GO:0071241,GO:0071248,GO:0071280,GO:0071310,GO:0071396,GO:0071470,GO:0071472,GO:0071473,GO:0071496,GO:0071824,GO:0071840,GO:0072364,GO:0080025,GO:0080090,GO:0080134,GO:0080135,GO:0090087,GO:0090088,GO:0090089,GO:0090568,GO:0097305,GO:0097306,GO:0097307,GO:0097308,GO:0098609,GO:0104004,GO:0140110,GO:1900428,GO:1900429,GO:1901700,GO:1901701,GO:1901981,GO:1902679,GO:1902680,GO:1902936,GO:1903506,GO:1903507,GO:1903508,GO:2000112,GO:2000113,GO:2000217,GO:2000531,GO:2000877,GO:2000879,GO:2001020,GO:2001141
EggNOG free text desc.	WD repeat-containing protein
EggNOG OGs	KOG0266@1,KOG0266@2759
COG Functional cat.	B
Best tax level	Eukaryota
Best eggNOG OG	NA\|NA\|NA
BRITE	ko00000,ko00001,ko03021,ko03036
Hectar predicted targeting category	other localisation
Exons	4
Model size	359
Cds size	357
Stop	0
Start	1

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_S-dermatodea_contig808.16272.1	prot_S-dermatodea_contig808.16272.1	Saccorhiza dermatodea SderLu1190fm monoicous	polypeptide	S-dermatodea_contig808 9232..19461 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622925318.645569-CDS-S-dermatodea_contig808:9231..9344	1622925318.645569-CDS-S-dermatodea_contig808:9231..9344	Saccorhiza dermatodea SderLu1190fm monoicous	CDS	S-dermatodea_contig808 9232..9344 +
1694079851.7334914-CDS-S-dermatodea_contig808:9231..9344	1694079851.7334914-CDS-S-dermatodea_contig808:9231..9344	Saccorhiza dermatodea SderLu1190fm monoicous	CDS	S-dermatodea_contig808 9232..9344 +
1622925318.658925-CDS-S-dermatodea_contig808:15135..15184	1622925318.658925-CDS-S-dermatodea_contig808:15135..15184	Saccorhiza dermatodea SderLu1190fm monoicous	CDS	S-dermatodea_contig808 15136..15184 +
1694079851.747979-CDS-S-dermatodea_contig808:15135..15184	1694079851.747979-CDS-S-dermatodea_contig808:15135..15184	Saccorhiza dermatodea SderLu1190fm monoicous	CDS	S-dermatodea_contig808 15136..15184 +
1622925318.6737535-CDS-S-dermatodea_contig808:18618..18765	1622925318.6737535-CDS-S-dermatodea_contig808:18618..18765	Saccorhiza dermatodea SderLu1190fm monoicous	CDS	S-dermatodea_contig808 18619..18765 +
1694079851.758421-CDS-S-dermatodea_contig808:18618..18765	1694079851.758421-CDS-S-dermatodea_contig808:18618..18765	Saccorhiza dermatodea SderLu1190fm monoicous	CDS	S-dermatodea_contig808 18619..18765 +
1622925318.6855333-CDS-S-dermatodea_contig808:19413..19461	1622925318.6855333-CDS-S-dermatodea_contig808:19413..19461	Saccorhiza dermatodea SderLu1190fm monoicous	CDS	S-dermatodea_contig808 19414..19461 +
1694079851.7667367-CDS-S-dermatodea_contig808:19413..19461	1694079851.7667367-CDS-S-dermatodea_contig808:19413..19461	Saccorhiza dermatodea SderLu1190fm monoicous	CDS	S-dermatodea_contig808 19414..19461 +

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at S-dermatodea_contig808:9232..19461+
coding sequence from alignment at S-dermatodea_contig808:9232..19461+

protein sequence of mRNA_S-dermatodea_contig808.16272.1

>prot_S-dermatodea_contig808.16272.1 ID=prot_S-dermatodea_contig808.16272.1|Name=mRNA_S-dermatodea_contig808.16272.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=119bp
MAGSLALAQPSKSVAAFRSLELCDRLKLEIGNITAEIGQHQEEREEYEKK
FRQQLLEMDRIQHSLKQLQENHMVMKQQYEDEIVRLRHKLDLSQGDHPEG
RGGGNSTAGVSGGMSMGST

mRNA from alignment at S-dermatodea_contig808:9232..19461+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_S-dermatodea_contig808.16272.1 ID=mRNA_S-dermatodea_contig808.16272.1|Name=mRNA_S-dermatodea_contig808.16272.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=10230bp|location=Sequence derived from alignment at S-dermatodea_contig808:9232..19461+ (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGGCAGGGAGTTTGGCCTTGGCGCAGCCTTCCAAGTCGGTGGCCGCGTT
CCGCAGCCTGGAGCTGTGCGACCGCCTCAAGCTGGAGATAGGAAACATCA
CAGCCGAGATAGGGTGAGAACTGAGAACACGAACTTGGCGAAAGTCGGGG
CGCGGGGGCGGTGGGGCGGGGGTGTTTTTTTCTTTTTTGGTCTTCGTTTC
CACCCCCACAATCAACCCCCCCTCCTACGCGCGGGCAGAAGAAAGAAAGA
CGCAGACAGCCTCTCTCTCTTCTGTCTTGCGGAAAAAGCACCAACAACAT
GGCCGGTTTCATTTTTTCCGACTTCCTTTGTTGGTGATGAGGTGGGGACT
TCCCCCCCCCCCCTTTTTTCTTTTTTGCCGAACGACCTCTCTAGTCTTTT
GACTCGGTCTCTCGCCGTCCATGACACACCGCGCCGTTATTTATACTATA
ATTAATAACTCTAGTACTGCTGTACGTAAATGACAAGAGCAGCTAATTAT
TAATAGTTATGCCTTGTGTGTCAATGCTGGAGTATAAGTAGCCCCGCCCC
TCTCTCTACGTATATCATAGCCTCTCTCGTTTCTTCAATAGACTTTAAAG
TAGGGGTGCGCATCTGCTGTGCGTGTGTGTGCGTGTGGTGTTTGTGTTTT
TCTGATATCGGGTCGCTGTTGCCAAAAGTCGTGTTTGCTGGTCTACTTGT
GATTTGTGACATTTCTTCTTCTAATCGGGGGAGGGGGGGGGGGTCGCAAC
ATATATATTTTAACGGAGCGCTATAATTTCTGCTGCTGCTGGTTGTTTGT
CTCTGCTCTCTCTTTTGTCTCTTATTTTTCGGTTGCAAGTGAAATTTCAA
TTTTCGAATTTTGGGGTCGTGCGAGTCGGGGGGTGGGACACACTATTTGA
TTTTTATATACTGCTGTACTGTACTGTACTGTACTGTACTGTATACTGTA
TATACTACATAACAAAGTTTGTATATACTCAAAAAGTTAAAGTTTGCACC
AAATTGTGCATCCGCAGCCCCCCCCCCTCCCCCCTCCCCCCCCGCCCTAC
CGAACTACCAAATTATGAATATCCGCTCCTACGTGCTGCTGTACCCTCAG
CATTCATCGCCGTTGTTGTGACAGCCGTGGCTATATAGATCGATGGCCCG
ACGCTCGATCGATATAAGGCCAAAACTTGCAAGAAGTCGTTGATTGGGTC
TCACAGTGTTCCTCTCTCTCTCTCCCACGCCCCAGCGCCCACGCCCACGC
CCCACACAGTTCCGACGACTATTTTTTCCATGCAGGGTGTAGTAGGGTGT
AATGCTGTGATAGGCAAGAAGAGCAGACAGAGCCAGCCCAGCCCGTGTTG
TTCTTCTTTAAAAATAATATCAATGACTCTTCGCTTCGTCGTCGGCCTTT
TTAAAAGCTTTTTTGGGATGCGTGTCTCGTGTCTCGTGTTTCGTGTCGTG
TCTTTCGTTGTTTTGTCTCTTTTCTGTGTAGACTGCTTGCTGCTGTGTTT
GAATTGCGTCTCTTCTTGTTTTGTTTTGAAATAAACTCTCTCTCTCACCG
ACTGCTGCCTCCCCACCCCTGAACACACACACACGCGCGCGGGTGAGCTC
GCTCCCATGGCCGGGGCGGGTTTTAAGTTTTTATCTGTGTGTTTGTAGTT
TTTTTTTTTTTTTTTTGCGTTTGACTCTTTTTATCATAGTATAGTATTAC
AGAGCACCTCTGATGCGAATGAAGCTCCCCGTGGAACTATTTTGGACTGC
TTTGGATGATGGGCTCGCGCGCGCCTTGCTTATGGGTTTGATCACAGCTA
GCTGTAGTGTATACATGCACAACTGTTAGTAGTACTATTGGACTAATACC
TGTATATATGGGAGAGCGATCTGGTATCATCATAGAATACACACCAGTGT
CAAGTGACACGTCATCTGACATGCATGTCATGTGTATGCATACAGCAAGC
AGTATTGTTGTATATAGCGATACTACAGCTGTACACACTATAAAATGCAT
GCAAGCACATATATTATAATAGGCTCCAAGGATAGCTCTATGCTATATGT
GTATGACGGCCTTGTTGGTACCTGCGTTTTGGGCCGCGTTCTGCAAGCAG
GGCAGAGGGGTGTCGGCGCTCGCCGATGACCCCAGCGAAGTGTTGGTGTG
TGAATTGGTTGTTGTTGGCGCGCGAAGTTTCGTAACTATGACAGCGTACC
TATGAACAGGCGCGCTATGATACAACGCCTTTTCTTATCTTATCCAATCT
TCATATCTCTCTGTCTCGGCAATGCCATCATATCATTGCTGCGCCGGCAC
ATGAGAGTGGAGAGAGCGGGGGAGGGCCGCCAGCAAGAGCCTTCTTGCCT
TTGTCATGTGTCATATCATATCATGCTTATCATTTGCACATGCGTTTTTT
ACAAAACAAACATACCAGTATGATAAGTAAGTACCACATACAAAGTGACT
GCATCTGCGGTGTGTTGACGCGTGGGGGCAAGGTGGGGGAGAGAAAAATG
AAAAATTGTGCTGCGAGCTCTCTCTCTCTCTCTCTCTCTTTTTTGTTTTG
TGGCGATCACAGGAAGAATGAATGGAATGCGTTTGATTTTACATCTGTTT
TGTCTAAATTTTTGCTGGTGTTCATTTAGTGTGTAACCGCGTCGAATGGA
TTGAACTACTGTACTCTTGTAGTTAAGTTAAGTTACAGTATGATATAGAT
ATAGTAATGAGAGGCAATTGGACCGAACGGCCAACGCGCTGAAACGACCG
CCAAGGGACGCATGCTGTTGACTTTTGATGGTCGTGACGACATGAGGACC
AACAGGCTGTGAGGTGCTGGCCAAACTCTGGCGTCTTGTGGAACCCCGGC
GGTTCTTTTTCTTTCGGTTCAAGAGGCAGAATTCAAAGGAAGGCAGGACT
TTTTCCCGGGGGCCGAGGGCATGTTAAATTATATATATCATACAGCAGCG
TTGACACATCATAATGAATGATCTGTGTGTACGAGTATGTAATGATTAAA
TAGTAACCGCAGACTTTGCGTCTGTTTTTTGTTGTTGTTGTTGCTCTTCC
ACGGATGGAGTTGGGGGGGGGGGGGGGGGGGGAAAGAGGGGCCCTTTCGA
AAAAAATCTTTTGGGGGGCCCACCCACCCCCCCTTTTTTTGCCGCCGCCG
CCCCCCGCGGCCCCCCCCCCCCTTTGGTGGGGGGTCAAGAAACAAAAAAA
NNNNNNNNNNCCAAGCAGCCGGGTCCATCTGGACCGGTACCTCCGGCCTG
ATCGCACGCACGGCAGACGGGAGGTAAGGGGGGAGGGGGGGGGGAACAGA
GGAACGGTTTCGAGAAATAACTTTGTGGCTGCACACATCCCACCATCATT
TAGCTGCTGCTGTCCCCAGCGTCGCCCCCCTCACGTTGATGGAGTGCAAT
GAATAAATAAGTAACCAGTGCGAGCGTGGTATGTACCAATAAGTCCAATA
GGTACTTGTCGGGGAACGATGGATGATGCCCCCAGCCGATGCTCTCCGTT
GTTGTCGTATGATATGCATAGCTAGCTCTTTCGTGTGTGTAATCGGTCGT
CAGGACCTACAGCATAGAGCGGATATGCATCCCTAGTGGGTGTGTGATTG
GACCTGGGAAAATCCTCCGGCAACCAGTGCATATGCACACAACCATGCGT
CTTTTCTCTCGCTCGGTATACATGCGAGCAAGTTTTAGTTTTTAGCGTGA
ATGGTGTAGATAAGAGAGCATGACACGAGAAGCGAGTAGGTATGTGCAAG
CAACGCCGCCCCCCGCCAACAGGCGGTCTGCCGTGAAAAACACTAAGGGG
ATGCATTTACACGGTGGCAAAGATTGTGCGTGTGTTTTTGTGTGTGTGTG
TGTGTGTGTGCGCGTGGGTGCGCCAGCAACCTACTTTGGTACACAGACAA
AGAAAGTAGAGGTTTTGCTCGCTTGTTTTTAAGGTCCCCGCGAGCCGCGT
AAGGGCTCTCCCCGACATCATGATGAGCCGTAGGTTAGTGTTGCGAACGC
TATGAATATGATATCATATTCGTCATTGCGCGTCGCTCGCGGGCGGTGCC
GATGTATGTGCTGGGATGTGGGTTTCGACCAGAGAGCGAATGAGAAGAGG
GGATGCAAGAGACAGACAGACAACACACAAGCACCCTTCGCGGCTTCCCA
AAGCCCTTCGCCCCGTCCGTGCCGTAACGGGCTGGAATTGTGCTGAGAGT
CGCCGGTTAGACTGACTCTCTGTGCGATTTCTCTCGATGGGGGGGCAGTG
TGAAAGTATGGAGCTTTTCCTGAAAATATCGGCGAGGCCCCAGGACTGCT
GCGTCAAATGATCCTCCGCCCATCTCCTCTTACAACACAACTTGAACAAG
ACATATATGTACAGCAGTACATACCTACAGCAGTACATATGTGTACTATG
CTGATGCTTTCTAGAATTATGTACAGTATATTAAGGAAGGACGCACCAAC
TGGTTCATGTTTTCAGCGAGGGCATCCCGTCTGGTTCGTCGCAAAGATAC
AAAGCGCCGCCGGGGCTATACCCCTGTTGAATACGTATAACACGCGATTG
CTGCAGCAAGCCAAGCTACTGACTGTAAGTATTGAGTATAATCGTCAATG
GTCATAAATATACTTCGTATATTAACAGAAGGTCACGAGAACACTCCAGC
CCAGCACGCCGCCTTGTTGCTTGGAAAGTGCGCTTTTGTATGCTTGTATG
TGATACTATTAATAACTGGCTGTATAGGCAAGACAGCACGTGGGGATGTA
TGCGTATATATACCGGACATGCGCATGTTGTATAAATGATGTGGTGGGGT
GGGAAAGGCTTGTCCGGGTCTTTTTCTCGACCTCCAACCACCCTGGCGTG
TTGAATCTTGTACAGCAGCACCAGTACAAGCAGTATGCACAGCGTTGCGC
ACCAAAATTGTGGTTGGTCCCTTAATGATAGAACGATCACCTGGCGCGGC
GTCCCTTGAGTTCTCTGGTGCTGTTTTACCCGGATTGTTACTTTGGCCGT
TAGGTTGATACCACACGCCGCTTCGGCAGCAGGGTTGGGCTGGGGCCTAT
TTGGTTTCACTATGCACATATCCCGACGGCGCGCGCTCCTCCTCCCTGCC
GAGCGAATACGGCAACGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
TTTTTTTTTTTTTTTTTTTTTGTCCCCCCACTAACAACCCATCCTTTTTT
GGAATCCCTGCTCCCCTCTTCTCCNNNNNNNNNNTTTGTTTCGCCGGGGT
GTGGTTCCCCTTGTCTGGTCTCACAACCCCCCTGCCGGGGGGGCGGGGGC
CCGCCCCCTCTGCCGCGTCAACCCGCCCCCTTTTTTTTTTTTTTTTTTTT
TTTTTTTTTTGCCTCGGCGTCGTCTTGCTTTTGCGCCCGGCAACGAACGA
CGCATCGTTCGTGGCAATCAGCGCTCCGCTCGTCTCCCCTGGGCTCTGGG
CTCCCTTGCCCCTTAACAAGTACCAGGTGCCTGGTAACGGTTACCACACG
CGCACGCTGCAGTCGCTCCCATCCACCGTCGGGGCAGGTGGGGGTACCGC
CCGAACGCTATTTCCAAACCGCCCAACGTCGACAGAACGCTATTTAGTTG
CGGCACGCCACTTGAATGATTTGTGGCTTGTGTTAGTTAAAACGGTCGTC
AAATGTGCGGCGCTCCTCACGCCGTGGACTCTCCCCCCCCACCCCACCCC
CCCCCCCCTCTCCGCTTCCCTTCCTCCCTGCCCTCCTCCCCTTGCGCGAT
GCTCCACATTATTGTGCCCGCCACTCGACACTGTTTTTTCCGCGTTGTCT
GGCCGCCCCGATTATGATGGGTGTTGGGTTGTGGTGCTGGTGCTGCTGGT
GCTGCCGCTGCCGGGATGTTGTGTGGCTTCAACGGGCGCGGATCGCTTTT
CCAGGCAACATCAGGAGGAGCGGGAAGAGTACGAGAAAAAGTTTCGACAG
CAGGTGAGAGGGGCGAGCGAAAAGCCAAAAAACAAAGCAAAAAGAAAGCA
GAGTCTCTCTCGTTTAGTAAGCTGTAGGTGTTTAGCTGTCTCTAAAAAAG
GCATGCTTGTATTGTATGATACCACTTACATGTATAGGTGACGCCGACGT
GAGCTGCGGGTGTCTAGCTGTCTCTAAAAAAGGCATGTTTGTATTGTATG
ATACTAGGTACATATATAGGTGACGCCGACGAAGCACTCCATCCACGGGG
CCTGTCTGTGATACTATTCATACTATTCAATATAAAAAAAAAACAGCATA
TTATGATAGTAATGTGCAGAACTATATACTGCTGGAAGGCGGATACAGGC
ACGCGCAATCTCTTTTCATAGGGGGGTACTCAGTGCTGCTGTCTTGTATG
ACACGTGACACGACATGTATAATATCTCTCGTTATTTTTCAAAGAATAAC
ATTCGGGCGAGATGCGGGGGGCGGGGGCGGGGGGGATACGACACCATATG
ATATGCATAGCATCATACTTCTATGTAACAAGCGAGCCTCCATAGGTGTG
TGTAGCTTGGACCATCTTCCCTCTTGAAAAGGTGGGATCCACCCTAACGC
TCGCTCGCTCTATGTTTCTGAAATATTTAATTTTTAGGGGGGCGGTTGCC
ATAAACGGCATGTGTGGCGGCGGCGGCGGTCAGCTTTGCGCGCATGTTTT
GTTTGGTCCTGTGGTAAAGACAGACAGTATGATAAAGATCGATGGTATGC
CCGCGAGGTAAAAGTGTATTGCTATTATATTAATTTTTTACTTGGAAGCT
GTTTAGATGATATACTGTACTGGTGTTATCGATCTTGTTTCCAACCCGGT
GGACGCAAACATAATTTTTTTTTCCCGTGGACCAATGCGCTCCGGCCAGA
TGCGTCGGTTGTGCGTGTGCACAAAAGCACAAGCGCGAGAAAGGTTTCAA
AACAGAAATATAAGAAAACAAACCACCAAACCAATCAATAAATTCCCAGC
CAGTATTTTTTTTGTCACGTGTCGCATCTTTGAGGTTGTGCGGCTGGCTG
GCTCTGGCTGTGAGCCGGGTGGCTTTTTTCATGACAAGAAAATTAATTAT
GTTCACCACCATTTTTTTTTTCTTTTTTTTTCTTAAAAAGGCAGGGTATA
CTTTTGTGTCATAAATAGTGCATGCGCACACGCCGCTTTGTATATGCGAT
ACAACATGAGTCTGACTTTTGGACCTGGGGGGAGGGGGGGGGGGGGGGGC
GGGGGGGCCGGAGGCGTCCCCGAGGCGTACGCGGGCACGGTATTTTTTTT
TGTGTGTTGGGCGTGCGAGCGGTTTTTTTTTTTGGCCTTTTTCCCGTGNN
NNNNNNNNTTGTGCTTCCTTTTCTTTGTTTTTTTTTTTTTTTTTTTTTTT
TTTTTTTTTTTTTTTTTGTGTGGGGGGGCGGGCCCCCGTGTGAGCCCGAG
GCGTACCCGAGGCGTACGCGAGCACGATATTTTTTTTCGTGTGTTGCGCG
TGCGAGCGATTTTTCATTTTAGCCCTTTGCCCGTGCTGGCGCTGCTTTGC
TTTGCTTCGCGGCGTGTCTCTGGTCGAATGCAGGTGCTGTACCGTTTTGA
TCTAAACTCCCCCCAACCCCACGCGCGCTTTCGCTGTGGGGGGCAGTGTC
TTTCATGAGGAATCAGCCCTGCGCAGTGGCATCTCTCGTGTCCCCGATCG
ATGCCATAAATAATAGCGATATTATATGCAGACTCAAATATATACCAGGT
ATATTTTTCCGATGTATTTGTGCGTGGTCTTCAAATTAAATCAGTATTGT
ATATACTTATAATGTATCTATAAGTACATGTATGATATCAAAGCTACCGG
TATACTGTAGAGAGAGCTATATTAGTACCAGGTTTTATCGTAAAATTCAT
TGACTATCTGGGGGTGGGCATGTCTGCCGGACCGACGCTCTTTTCGTGCT
TGCTCTTTAGACGGCATTTTTCGACTCTTTAGTGCTATCGCTGTGTACAC
ACAAACACATAACAAGACACAGGTGAAAAGCATCATATATGTCGTTGCGG
GCCCACCCGACCCCGCCGTGTGTGTTTTGTTATGCCTACTGTGTATTGCC
AGTCTCCGCGCCGTGCCCTCTAAGGTCGTCCTGCTCTCAATCTCTCAACC
TGGGCGGTCAAGATACTCGATCGCCCCAAAGGGGGGCGGGGGGGGGTCAG
GGGGGTCAGGGGGTCTTGTCTTGTTATTTTTGTTGCAAAAAGCACCTACC
TCCAAAACAAACCCGTCCTCTCTGTGTACAAGTAATTAGTATCTGTAGAC
CGCGCCTATGCATATACCTCGGACTATGCATATGCACTATAATAAATACT
ATTTATGATCAACAAGAGCGGCATGTCGGTGCTGAATCGTCGCTTTCGAG
CGGCGGCGGGGGCGGGGTCGGGCGGGAAAGCCGGCCAAGCACACAGCTCA
TTCGCATTCGCACTCGCATTCGCATTCGCATTCGGCGGGCGTAATGTGTC
GCCCCGCGGCTTAGCTTTGCCATTGTCTGGCGATTTGATCGACGGGTAGT
GGCATCGCTCATGCCGTTCAACCCCCCCCCCCCCCCCCCCCCCCCCCCCC
CCCCCCGCCCCCCCCCCCCCTCCTCCCCCCCCCCTTGTTCCCCGTCCACG
TCTCGCNNNNNNNNNNATTGGTGCGCCCGCGGGTTGGCTGTTCTCTTGTT
TTGGGTTTTGGTTGCTCGGTGGGAGCGCCGTGCCTGCCCGTCCACCCCCC
CGGCCCCCCCCCCCCCCCCCCGCGCAGTTTTTCTCTGTTCTCGCTTCTCA
CTTGTCAGTTAATTGCACCTGTAAGCGTCTGGTGTAATAAATTATTATAC
TACAGGTACACTGTATTTATTATACTACAGGTACACTGTATTTATCACAA
GGTGGAGTTGATTTTTTTTGCGGTGGCGTCGCCTCGAAAATAGAGGTGGC
GGCGGCGGTAGGCGGCGGCAGCGGCAGCGGCTCACGCCCCCTCTTGATCA
TCCCTCGCGAGCCTCAACCTCTTGCATAGCCAGCCAGCGTTTTGTTCGTG
TTTGTCCTCCGCTACAGCAGCAGCACTACTATATACTACAGTAGTTTTAT
GTATTTTCTTCTTCTTTTTTTTTGCCCCTCGGAGTCCTGCTTTTTTTTTC
TCAGCTCCTCACGGCCGGTCCCCCCCCCCTCCCTCCTTCCCTCCCTGCGC
CTTATGTAACCCTTATGTGACGTTTTCGGCGTCGCTCCTCTCTCTCCCTC
TCTTTTTCCGACTGGCCGTTGTTGTGTTGCTTGTGATCAACCTTCGTTGG
GGCGCCTTTTTTTATTTTAATTTTTTCGATTTTCAACCGCGGGACAAACG
AACGGACGCGGCAACGAACGGGGCTCGGTAAAAATGAAAATAAAACTCAC
ACACACATCCGGTCTTGTGATGGTGATGGCGATGCAGCTTCTGGAGATGG
ACCGGATACAGCACTCCCTCAAGCAGCTGCAGGAGAACCACATGGTGATG
AAGCAGCAGTACGAGGACGAGATCGTCCGGCTTCGACACAAGCTTGACCT
CTCGCAGGGCGACCACCCCGAGGGCCGCGGCGGGGTGAGAGGCAGGGAGA
GAAAGAGAGATCGATAGATAGCACACGAGACTGTTCGTTATTTCAGTTGT
TTTCCCTCTTTCTTGCGATCGATATGTTGGTTGTTATTTTGTCCGTTGCC
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
CCCCCCCCCCCCCCCCCACCGTGTTGTGGTGTTGTCGGCGGTGGTTTTCG
TAGTAAAGGCACGCGCTTGTGTTGCCATCGCAAAGTCGTATGTAGGTGTG
ATTGTATTCATGCTGCTTGAACGAGACAAGCCGTTCTGGCCCCGCCCACG
TCTTCACGCACGAATGCCGACTACTTAAATAGTACTGCTGTAAAATCTGT
TTTTTTTATGTGTGTTTTTAAACTCCTGCCCCCCCCCCCCCCCCCCCCCC
CCCCCCCCCCACCCCCCACCCCCACACCCCCCCCCCCGGAGAAGCCCCCC
GGGGGGGGGAGCGGGGGGGGGAGAGGGNNNNNNNNNNCCCCCCCCCCTCT
TTCCCCACGAAAGCCCACAACTTAAAAAGTATTGCTGTAAAATCTGTTTT
TTTTTTGTTTGTTTTTCACCCCCCCCCCCCCCCCCCCCCCCCCGATCCAA
TCCCCAAACCAACCCAACCTAACCTAACCCAGGGGAACTCCACGGCGGGC
GTAAGCGGTGGTATGAGCATGGGCTCCACG

Coding sequence (CDS) from alignment at S-dermatodea_contig808:9232..19461+

>mRNA_S-dermatodea_contig808.16272.1 ID=mRNA_S-dermatodea_contig808.16272.1|Name=mRNA_S-dermatodea_contig808.16272.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=714bp|location=Sequence derived from alignment at S-dermatodea_contig808:9232..19461+ (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGGCAGGGAGTTTGGCCTTGGCGCAGCCTTCCAAGTCGGTGGCCGCGTT
CCGCAGCCTGGAGCTGTGCGACCGCCTCAAGCTGGAGATAGGAAACATCA
CAGCCGAGATAGGATGGCAGGGAGTTTGGCCTTGGCGCAGCCTTCCAAGT
CGGTGGCCGCGTTCCGCAGCCTGGAGCTGTGCGACCGCCTCAAGCTGGAG
ATAGGAAACATCACAGCCGAGATAGGGCAACATCAGGAGGAGCGGGAAGA
GTACGAGAAAAAGTTTCGACAGCAGGCAACATCAGGAGGAGCGGGAAGAG
TACGAGAAAAAGTTTCGACAGCAGCTTCTGGAGATGGACCGGATACAGCA
CTCCCTCAAGCAGCTGCAGGAGAACCACATGGTGATGAAGCAGCAGTACG
AGGACGAGATCGTCCGGCTTCGACACAAGCTTGACCTCTCGCAGGGCGAC
CACCCCGAGGGCCGCGGCGGGCTTCTGGAGATGGACCGGATACAGCACTC
CCTCAAGCAGCTGCAGGAGAACCACATGGTGATGAAGCAGCAGTACGAGG
ACGAGATCGTCCGGCTTCGACACAAGCTTGACCTCTCGCAGGGCGACCAC
CCCGAGGGCCGCGGCGGGGGGAACTCCACGGCGGGCGTAAGCGGTGGTAT
GAGCATGGGCTCCACGGGGAACTCCACGGCGGGCGTAAGCGGTGGTATGA
GCATGGGCTCCACG