prot_S-dermatodea_contig80798.16270.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig80798.16270.1
Unique Nameprot_S-dermatodea_contig80798.16270.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length136
Homology
BLAST of mRNA_S-dermatodea_contig80798.16270.1 vs. uniprot
Match: D7G854_ECTSI (Cysteine--tRNA ligase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G854_ECTSI)

HSP 1 Score: 236 bits (602), Expect = 5.760e-72
Identity = 110/132 (83.33%), Postives = 115/132 (87.12%), Query Frame = 0
Query:    7 WESPFGPGRPGWHIECSAMTHALFGKHLDLHSGGVDLKFPHHTNEIAQCEAHNCGG-GVNALALAPSGAGAA-KPWVRHWIHTGHLNIEGLKMSKSLKNFVTVREYLEGHSAGRVAAAEDFRMFCLMHKYSS 136
            WESPFG GRPGWHIECSAMTH+LFG +LD+HSGGVDLKFPHHTNEIAQCEAH CGG    A A    G G   KPWVRHWIHTGHLNIEGLKMSKSLKNFVT+REYLEGHSAG+ AAAEDFRMFCLMHKYSS
Sbjct:  243 WESPFGRGRPGWHIECSAMTHSLFGPNLDVHSGGVDLKFPHHTNEIAQCEAHACGGVAATAAATGDGGVGGERKPWVRHWIHTGHLNIEGLKMSKSLKNFVTIREYLEGHSAGQEAAAEDFRMFCLMHKYSS 374          
BLAST of mRNA_S-dermatodea_contig80798.16270.1 vs. uniprot
Match: A0A836CJU0_9STRA (Cysteine--tRNA ligase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJU0_9STRA)

HSP 1 Score: 194 bits (492), Expect = 2.060e-55
Identity = 91/160 (56.88%), Postives = 111/160 (69.38%), Query Frame = 0
Query:    1 RNGTSRWESPFGPGRPGWHIECSAMTHALFGKHLDLHSGGVDLKFPHHTNEIAQCEAHNCGGGVNALALAPSGAG-AAKP-----------------------WVRHWIHTGHLNIEGLKMSKSLKNFVTVREYLEGHSAGRVAAAEDFRMFCLMHKYSS 136
            + G   W+SPFG GRPGWHIECSAMTHALFG  LD+H+GG+DLKFPHHTNEIAQC+AH   G   A   +P   G AA+P                       W RHW+HTGH++IEGLKMSKSLKNF+TV+EY+E H  G V A++DFR+FCLMH+Y++
Sbjct:  324 KEGEPSWDSPFGRGRPGWHIECSAMTHALFGSDLDVHTGGIDLKFPHHTNEIAQCDAHASRGLCCAPPPSPPHTGTAAEPPNTRGIIGAPNPDARSGGQQGGEWCRHWLHTGHVHIEGLKMSKSLKNFITVKEYIEAHGGGAVQASQDFRIFCLMHRYTA 483          
BLAST of mRNA_S-dermatodea_contig80798.16270.1 vs. uniprot
Match: A0A7S1UEW0_9STRA (Hypothetical protein (Fragment) n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UEW0_9STRA)

HSP 1 Score: 170 bits (430), Expect = 1.240e-49
Identity = 81/138 (58.70%), Postives = 95/138 (68.84%), Query Frame = 0
Query:    1 RNGTSRWESPFGPGRPGWHIECSAMTHALFGKHLDLHSGGVDLKFPHHTNEIAQCEAHNCGGGVNALALAPSGAGAAKPWVRHWIHTGHLNIEGLKMSKSLKNFVTVREYLEGHSAGRVA--AAEDFRMFCLMHKYSS 136
            + G   W+SP+GPGRPGWHIECSAMTHA+FG  LD+HSGGVDL FPHH NEIAQCEAHN                A+  WV+HW+H GHL+IEG KMSKSLKNFV+V +      AG     AA+DFR+FCL  +Y S
Sbjct:  113 KGGEISWDSPWGPGRPGWHIECSAMTHAIFGPELDIHSGGVDLCFPHHCNEIAQCEAHN----------------ASDAWVKHWVHAGHLHIEGRKMSKSLKNFVSVEDLFGKIYAGADPRDAADDFRLFCLSQRYRS 234          
BLAST of mRNA_S-dermatodea_contig80798.16270.1 vs. uniprot
Match: K3W8N7_GLOUD (Cysteine--tRNA ligase n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W8N7_GLOUD)

HSP 1 Score: 171 bits (434), Expect = 9.710e-48
Identity = 79/134 (58.96%), Postives = 97/134 (72.39%), Query Frame = 0
Query:    3 GTSRWESPFGPGRPGWHIECSAMTHALFGKHLDLHSGGVDLKFPHHTNEIAQCEAHNCGGGVNALALAPSGAGAAKPWVRHWIHTGHLNIEGLKMSKSLKNFVTVREYLEGHSAGRVAAAEDFRMFCLMHKYSS 136
            G   W+SP+GPGRPGWHIECSAMTH + G  LDLHSGG+DL+FPHH NEIAQCEAHNCG  V+     P        W +H++H GHL I+GLKMSKSLKNF++++E+LE H+A      + FR+FCL  KY S
Sbjct:  197 GEPSWDSPWGPGRPGWHIECSAMTHHVLGDKLDLHSGGIDLRFPHHNNEIAQCEAHNCG--VDHYHHHPE-------WCKHFVHFGHLYIQGLKMSKSLKNFISIKEFLEDHTA------DQFRLFCLQFKYRS 315          
BLAST of mRNA_S-dermatodea_contig80798.16270.1 vs. uniprot
Match: A0A7R9Y8Y4_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9Y8Y4_9STRA)

HSP 1 Score: 165 bits (417), Expect = 2.970e-46
Identity = 80/136 (58.82%), Postives = 94/136 (69.12%), Query Frame = 0
Query:    3 GTSRWESPFGPGRPGWHIECSAMTHALFGKHLDLHSGGVDLKFPHHTNEIAQCEAHNCGGGVNALALAPSGAGAAKPWVRHWIHTGHLNIEGLKMSKSLKNFVTVREYLEGHSAGR--VAAAEDFRMFCLMHKYSS 136
            G   WES +GPGRPGWHIECSAMT++LFG+ LD+HSGGVDL FPHH NEIAQCEAH   G               K WV+ W+H GHL+I+G KMSKSLKNF+TVRE  +    G+   AAA+DFR FCL  +Y S
Sbjct:  128 GEISWESKWGPGRPGWHIECSAMTYSLFGEQLDIHSGGVDLCFPHHCNEIAQCEAHFLNG---------------KEWVKLWLHAGHLHIDGRKMSKSLKNFITVRELFDEMYTGQPTAAAADDFRFFCLGQRYRS 248          
BLAST of mRNA_S-dermatodea_contig80798.16270.1 vs. uniprot
Match: A0A8K1CC06_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CC06_PYTOL)

HSP 1 Score: 165 bits (418), Expect = 2.650e-45
Identity = 76/128 (59.38%), Postives = 91/128 (71.09%), Query Frame = 0
Query:    7 WESPFGPGRPGWHIECSAMTHALFGKHLDLHSGGVDLKFPHHTNEIAQCEAHNCGGGVNALALAPSGAGAAKPWVRHWIHTGHLNIEGLKMSKSLKNFVTVREYLEGHSAGRVAAAEDFRMFCLMHKY 134
            W SP+GPGRPGWHIECSAMTH + G  LD+HSGG+DLKFPHH NEIAQCEAHNC    +A             W RH++H GHL I GLKMSKSLKNF++++E+L  HSA      + FR+FCL +KY
Sbjct:  244 WPSPWGPGRPGWHIECSAMTHRVLGDRLDVHSGGIDLKFPHHNNEIAQCEAHNCSHLHDA------------EWCRHFVHFGHLYIRGLKMSKSLKNFISIKEFLATHSA------DHFRLFCLQYKY 353          
BLAST of mRNA_S-dermatodea_contig80798.16270.1 vs. uniprot
Match: A0A5D6Y496_9STRA (Cysteine--tRNA ligase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y496_9STRA)

HSP 1 Score: 163 bits (413), Expect = 1.680e-44
Identity = 76/130 (58.46%), Postives = 96/130 (73.85%), Query Frame = 0
Query:    7 WESPFGPGRPGWHIECSAMTHALFGKHLDLHSGGVDLKFPHHTNEIAQCEAHNCGGGVNALALAPSGAGAAKPWVRHWIHTGHLNIEGLKMSKSLKNFVTVREYLEGHSAGRVAAAEDFRMFCLMHKYSS 136
            W+SP+G GRPGWHIECSAMTH + G  LD+H+GG+DLKFPHH NEIAQCEAH+C    + L  A S AG    W +H++H GHL I+GLKMSKSLKNF++++++L  HSA      + FR+FCL  KY S
Sbjct:  241 WDSPWGRGRPGWHIECSAMTHYVLGAKLDVHTGGIDLKFPHHNNEIAQCEAHSC---CSPLP-AGSAAGNDDDWCKHFVHFGHLYIQGLKMSKSLKNFISIQDFLATHSA------DHFRLFCLQFKYRS 360          
BLAST of mRNA_S-dermatodea_contig80798.16270.1 vs. uniprot
Match: A0A2D4BU96_PYTIN (Cysteine-tRNA ligase (Fragment) n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BU96_PYTIN)

HSP 1 Score: 161 bits (407), Expect = 4.010e-44
Identity = 78/131 (59.54%), Postives = 94/131 (71.76%), Query Frame = 0
Query:    7 WESPFGPGRPGWHIECSAMTHALFGKHLDLHSGGVDLKFPHHTNEIAQCEAHNC---GGGVNALALAPSGAGAAKPWVRHWIHTGHLNIEGLKMSKSLKNFVTVREYLEGHSAGRVAAAEDFRMFCLMHKY 134
            W SP+G GRPGWHIECSAMTH + G  LD+H+GG+DLKFPHH NEIAQCEAHN      G +A AL    +G  + W RH+IH GHL I GLKMSKSLKNF++V+++LE HSA      + FR+F   HKY
Sbjct:  101 WPSPWGAGRPGWHIECSAMTHRVLGAKLDVHTGGIDLKFPHHNNEIAQCEAHNGLVPSAGAHACALHHPHSGEDE-WCRHFIHFGHLYIRGLKMSKSLKNFISVQDFLETHSA------DQFRVFXXQHKY 224          
BLAST of mRNA_S-dermatodea_contig80798.16270.1 vs. uniprot
Match: A0A0H5QTY7_9EUKA (tRNA-synt_1e domain-containing protein n=2 Tax=Spongospora subterranea TaxID=70186 RepID=A0A0H5QTY7_9EUKA)

HSP 1 Score: 156 bits (394), Expect = 2.550e-43
Identity = 69/130 (53.08%), Postives = 91/130 (70.00%), Query Frame = 0
Query:    7 WESPFGPGRPGWHIECSAMTHALFGKHLDLHSGGVDLKFPHHTNEIAQCEAHNCGGGVNALALAPSGAGAAKPWVRHWIHTGHLNIEGLKMSKSLKNFVTVREYLEGHSAGRVAAAEDFRMFCLMHKYSS 136
            WESP+GPGRPGWHIECSAM+ ++FG+HLD+H GG+DLKFPHH NE+AQCEA                  ++  W   ++HTGHL+I+G+KMSKSLKNF++V ++L  H        + FRMFCL+H+Y S
Sbjct:  124 WESPWGPGRPGWHIECSAMSSSVFGRHLDIHGGGIDLKFPHHNNEVAQCEA----------------CFSSNSWATQFLHTGHLHIDGVKMSKSLKNFLSVDDFLADHEP------DSFRMFCLLHRYRS 231          
BLAST of mRNA_S-dermatodea_contig80798.16270.1 vs. uniprot
Match: A0A024G9T2_9STRA (Cysteine--tRNA ligase n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024G9T2_9STRA)

HSP 1 Score: 159 bits (401), Expect = 6.280e-43
Identity = 73/130 (56.15%), Postives = 93/130 (71.54%), Query Frame = 0
Query:    7 WESPFGPGRPGWHIECSAMTHALFGKHLDLHSGGVDLKFPHHTNEIAQCEAHNCGGGVNALALAPSGAGAAKPWVRHWIHTGHLNIEGLKMSKSLKNFVTVREYLEGHSAGRVAAAEDFRMFCLMHKYSS 136
            WESP+GPGRPGWHIECSAM H + GK +DLH+GG+DL+FPHH NEIAQ EA+N        +L  +     KPW RH++H GHL I+G KMSKSLKNF T+  +LE ++A      ++FR+FCL +KY S
Sbjct:  236 WESPWGPGRPGWHIECSAMIHHVLGKTIDLHTGGIDLRFPHHNNEIAQSEAYNHSHSETCCSLQVN-----KPWCRHFLHFGHLYIQGQKMSKSLKNFTTIEAFLEKNTA------DEFRVFCLQYKYRS 354          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig80798.16270.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G854_ECTSI5.760e-7283.33Cysteine--tRNA ligase n=2 Tax=Ectocarpus TaxID=287... [more]
A0A836CJU0_9STRA2.060e-5556.88Cysteine--tRNA ligase n=1 Tax=Tribonema minus TaxI... [more]
A0A7S1UEW0_9STRA1.240e-4958.70Hypothetical protein (Fragment) n=2 Tax=Phaeomonas... [more]
K3W8N7_GLOUD9.710e-4858.96Cysteine--tRNA ligase n=1 Tax=Globisporangium ulti... [more]
A0A7R9Y8Y4_9STRA2.970e-4658.82Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A8K1CC06_PYTOL2.650e-4559.38Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A5D6Y496_9STRA1.680e-4458.46Cysteine--tRNA ligase n=1 Tax=Pythium brassicum Ta... [more]
A0A2D4BU96_PYTIN4.010e-4459.54Cysteine-tRNA ligase (Fragment) n=1 Tax=Pythium in... [more]
A0A0H5QTY7_9EUKA2.550e-4353.08tRNA-synt_1e domain-containing protein n=2 Tax=Spo... [more]
A0A024G9T2_9STRA6.280e-4356.15Cysteine--tRNA ligase n=1 Tax=Albugo candida TaxID... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR024909Cysteinyl-tRNA synthetase/mycothiol ligasePRINTSPR00983TRNASYNTHCYScoord: 4..22
score: 66.27
coord: 35..56
score: 66.53
IPR024909Cysteinyl-tRNA synthetase/mycothiol ligasePANTHERPTHR10890CYSTEINYL-TRNA SYNTHETASEcoord: 3..135
IPR014729Rossmann-like alpha/beta/alpha sandwich foldGENE3D3.40.50.620coord: 1..136
e-value: 1.9E-52
score: 180.1
IPR032678tRNA synthetases class I, catalytic domainPFAMPF01406tRNA-synt_1ecoord: 2..118
e-value: 2.6E-39
score: 135.4
NoneNo IPR availablePANTHERPTHR10890:SF3CYSTEINE--TRNA LIGASE, CYTOPLASMICcoord: 3..135
NoneNo IPR availableSUPERFAMILY52374Nucleotidylyl transferasecoord: 5..134

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig80798contigS-dermatodea_contig80798:242..649 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig80798.16270.1mRNA_S-dermatodea_contig80798.16270.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig80798 242..649 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig80798.16270.1 ID=prot_S-dermatodea_contig80798.16270.1|Name=mRNA_S-dermatodea_contig80798.16270.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=136bp
RNGTSRWESPFGPGRPGWHIECSAMTHALFGKHLDLHSGGVDLKFPHHTN
EIAQCEAHNCGGGVNALALAPSGAGAAKPWVRHWIHTGHLNIEGLKMSKS
LKNFVTVREYLEGHSAGRVAAAEDFRMFCLMHKYSS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR024909Cys-tRNA/MSH_ligase
IPR014729Rossmann-like_a/b/a_fold
IPR032678tRNA-synt_1_cat_dom