prot_S-dermatodea_contig807.16254.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig807.16254.1
Unique Nameprot_S-dermatodea_contig807.16254.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length603
Homology
BLAST of mRNA_S-dermatodea_contig807.16254.1 vs. uniprot
Match: A0A6H5JIM1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIM1_9PHAE)

HSP 1 Score: 318 bits (816), Expect = 5.870e-96
Identity = 304/710 (42.82%), Postives = 372/710 (52.39%), Query Frame = 0
Query:   32 RKHDSKPCAPPSHPAATAEVGQLLDLGLALGHQRFELVSLAGRDDAGMVAAHAWAEAKKDHTRAS------NRVEDIRSSIPRPPL---GRPLPQGGDDVRSAGRRQELHVEVEWLRERVDNLSKELVLARRDSARLAQQLKQEEGVGREQRRKADDAVGEARALREELGRLKEARTVHGEASRAALADAHDRSVRMAERRRRQQAESLMQAYKGLYEDQLQAQHASAESYRCLARGYGRLSATSKPLRQET-------------------------------VASAAAPLTAPACALTQTDAQPYEEG---AAYDILAKSRRAEIVSEGVAGFSTTSAPLVRPIND-------CDAPLPRATAAESAAAXXXXXXXXXXXXXXXXVH-------------------AADSEHAPSH------EPAGRAKG----FGC--------------ARKSGASPTDSDSTAETLTCSP-SDDAQALVVTDRGGGSGVDGTAPAGRGE-GRGKRSADPPAAGITVGQERAP-----IAKYDDRGDGKSCTSAEAFAFPW-TGR----CLAPSEPQDR--------ARDNK--------------NE----KPDDFS---AMASSLAAIAIPPVDPAPRWRGRSVGPRRGLASASSWPEA--VDAPKRSSSPTQSGHRTWGVC--GGGGRGLGGGYSAENGCTRIEPS-RARPHSI 602
            R+H+     PPSHPAAT EVGQLLDLGLALGH+RFELVSL GR++ GMVAAHAWAE +    R S      +    IR + P        R    GGD    AGR + L  EVEWLRERV+NLS+ELVLAR+DS RLA+QLKQEEG+GRE RRKADDAV EA+ALR+EL R+K+ R   G ASR AL+DAH RSVRMAERRRR+QAESLMQAYKGLYEDQLQ QHASAESYR L RGY R+SA ++ LR+E                                 ++ ++PL      +++ +    +EG      D+      A       A  ++T      P+ +        +     + AAESAA XXXXXXXXXXXXXXXX                     AA S  APSH      +   RA+      GC              A ++ A+ TD  ST ETL C P SD A+    T     + V  TA  G+ E G    S   P A  +V    A           ++  G    SA+ +AFP  TG       APS  +++        AR+++              NE    + DD     A  +  + +A+PP +PAPRWRGRS  P R LAS++SW EA  VDAPKRS+SPT      WG C   GG  G G      NGCTRIEPS RARPHSI
Sbjct:   27 RRHEMSAPLPPSHPAATTEVGQLLDLGLALGHERFELVSLVGREETGMVAAHAWAECEGSVRRPSGGDPRASTATTIRITQPHDASTTRSRQASHGGDVKVQAGREKLLR-EVEWLRERVENLSRELVLARKDSGRLAKQLKQEEGLGREHRRKADDAVREAKALRQELDRIKQDRAAIGSASRTALSDAHLRSVRMAERRRRRQAESLMQAYKGLYEDQLQTQHASAESYRSLTRGYSRISADNEALRREAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKTSTKSSPLFHVGEEISRDERSARKEGREETRRDVGRGGETAPPPERSRAAITSTCTTTALPVLEKGRGSSVVETASYTSAAAESAAXXXXXXXXXXXXXXXXXXXXTTAAPPPTKDTADIEEGPAAASRIAPSHGRKADHQQKARARSNLGRSGCVVLERCDSRERIEAADRASATNTDRPSTTETLVCFPFSDSAEGPSSTST---TAVASTARTGKKEDGAAADSGWAPPADFSVSWIEAASMSGTTTPSSEKNHGFHRGSAKGYAFPQETGEEERFSAAPSSAREQDAAATXXXARESRGSEGLGSDERGGALNEEGPPRADDKKEEIARPAQRSMVAVPPGEPAPRWRGRSAAPGRLLASSASWAEAAEVDAPKRSTSPTTPRRGRWGGCVTWGGATGKGAAEEDGNGCTRIEPSSRARPHSI 732          
BLAST of mRNA_S-dermatodea_contig807.16254.1 vs. uniprot
Match: D8LTG7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTG7_ECTSI)

HSP 1 Score: 242 bits (617), Expect = 5.250e-68
Identity = 236/626 (37.70%), Postives = 278/626 (44.41%), Query Frame = 0
Query:  118 GGDDVRSAGRRQELHVEVEWLRERVDNLSKELVLARRDSARLAQQLKQEEGVGREQRRKADDAVGEARALREELGRLKEARTVHGEASRAALADAHDRSVRMAERRRRQQAESLMQAYKGLYEDQLQAQHASAESYRCLARGYGRLSATSKPLRQETVA------------------------------------------------------------------SAAAPL-----TAPACALTQTDAQPYEEGAAYDILAKSRRAEIVSEGVAGFS-----------------TTSAPLVRPINDCDAPLPRATAAESAAAXXXXXXXXXXXXXXXXVHAADSEHAPSH---EPAGRAKGFGCARKSGASPTDSDSTAETLTCSP-SDDAQALVVTDRGGGSGVDGTAPAGRGEGRGKRSAD--PPA----AGITVGQERAPIAKYDDRGDGKSCTSAEAFAFPWTGR----------------------------------------CLAPSEPQDRARDNKNEKPDDFSAMASSLAAIAIPPVDPAPRWRGRSVGPRRGLASASSWPEA--VDAPKRSSSPTQSGHRTWGVCGGGGRGLGGGYSAENGCTRIEPS-RARPHSI 602
            GGD    AGR +EL  EVEWLRERV+NL++ELVLAR+D  RLA QLKQEEG+GRE RRKADDAV EA+ALR+EL R+K+ R   G ASR AL+DAH RSVRMAERRRRQQAESLMQAYKGLYEDQL  QHASAESYR L RGY RLSA +K LR+ET A                                                                   A AP       A +   T T     E+G    ++  +      +E  A                    TT AP   P  D  A +   TA  S                     A  +     H   E     +    A ++ A+ TD  ST ETL CSP SD A+    T     + +D TA AG+ EG     +   PPA    +GI    +    A   +   G +  SA+ +AFP   R                                             E   RA D K E     SA  +    +A+PPVDPAPRWRGRSV P R LAS++SW EA  VDAPKRS+SPT      WG C                CTRIEPS RARPHSI
Sbjct:   17 GGDAKMQAGR-EELLREVEWLRERVENLNRELVLARKDCGRLATQLKQEEGLGREHRRKADDAVREAKALRQELDRIKQDRAAKGSASRTALSDAHLRSVRMAERRRRQQAESLMQAYKGLYEDQLHTQHASAESYRSLTRGYSRLSADNKALRRETAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXISRDERSARKEXXXXTRRGVGRQGATAPXXXXXXAANSSTCTTTALPVLEKGRESSVVETASYGSAAAESAAXXXXXXXXXXXXXXXXXXXXTTVAPP--PAKDT-ADIEEGTAGASRTTPSHGRREAAPAGHRQKERARSNLGRSGHVVLERCDSRERMEAADRASATNTDRPSTTETLACSPFSDSAEGPCSTAT---TAIDSTARAGKKEGGAAADSGWAPPADFSVSGIEAASKSGATAPGSEMNRGFNRGSAKGYAFPQETREEESFSAAXXXXXXXXXXXXXXXXXRESRGSHGLRSDKRGGAINEEGPPRADDKKEE-----SARPAQGRMVAVPPVDPAPRWRGRSVAPGRLLASSASWVEAIEVDAPKRSTSPTTPRRGRWGGCVAXXXXXXXXXXXXXXCTRIEPSSRARPHSI 630          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig807.16254.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JIM1_9PHAE5.870e-9642.82Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LTG7_ECTSI5.250e-6837.70Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 177..197
NoneNo IPR availableCOILSCoilCoilcoord: 128..162

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig807contigS-dermatodea_contig807:1546..5595 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig807.16254.1mRNA_S-dermatodea_contig807.16254.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig807 1432..6444 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig807.16254.1 ID=prot_S-dermatodea_contig807.16254.1|Name=mRNA_S-dermatodea_contig807.16254.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=603bp
MRSSYGGRYTHAPENHGGGIVVLSQDSKCQTRKHDSKPCAPPSHPAATAE
VGQLLDLGLALGHQRFELVSLAGRDDAGMVAAHAWAEAKKDHTRASNRVE
DIRSSIPRPPLGRPLPQGGDDVRSAGRRQELHVEVEWLRERVDNLSKELV
LARRDSARLAQQLKQEEGVGREQRRKADDAVGEARALREELGRLKEARTV
HGEASRAALADAHDRSVRMAERRRRQQAESLMQAYKGLYEDQLQAQHASA
ESYRCLARGYGRLSATSKPLRQETVASAAAPLTAPACALTQTDAQPYEEG
AAYDILAKSRRAEIVSEGVAGFSTTSAPLVRPINDCDAPLPRATAAESAA
AVATAAAAVAAAAEALAVHAADSEHAPSHEPAGRAKGFGCARKSGASPTD
SDSTAETLTCSPSDDAQALVVTDRGGGSGVDGTAPAGRGEGRGKRSADPP
AAGITVGQERAPIAKYDDRGDGKSCTSAEAFAFPWTGRCLAPSEPQDRAR
DNKNEKPDDFSAMASSLAAIAIPPVDPAPRWRGRSVGPRRGLASASSWPE
AVDAPKRSSSPTQSGHRTWGVCGGGGRGLGGGYSAENGCTRIEPSRARPH
SI*
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