prot_S-dermatodea_contig80695.16251.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig80695.16251.1
Unique Nameprot_S-dermatodea_contig80695.16251.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length44
Homology
BLAST of mRNA_S-dermatodea_contig80695.16251.1 vs. uniprot
Match: D8LD80_ECTSI (KH domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LD80_ECTSI)

HSP 1 Score: 82.8 bits (203), Expect = 3.540e-18
Identity = 42/44 (95.45%), Postives = 43/44 (97.73%), Query Frame = 0
Query:    1 SRAIGRIAGQGGKTRHAIENATRTRIIVAEQKVHILGSFGNIKV 44
            SRAIGRIAGQGGKTRHAIENATRTRIIVA+QKVHILGSF NIKV
Sbjct:  168 SRAIGRIAGQGGKTRHAIENATRTRIIVADQKVHILGSFSNIKV 211          
BLAST of mRNA_S-dermatodea_contig80695.16251.1 vs. uniprot
Match: A0A7S2XZF6_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZF6_9STRA)

HSP 1 Score: 76.6 bits (187), Expect = 6.630e-16
Identity = 36/44 (81.82%), Postives = 42/44 (95.45%), Query Frame = 0
Query:    1 SRAIGRIAGQGGKTRHAIENATRTRIIVAEQKVHILGSFGNIKV 44
            SRAIGRIAGQ GKTRHAIENATRTR++VA+Q++HILGSF NI+V
Sbjct:  156 SRAIGRIAGQDGKTRHAIENATRTRVVVADQRIHILGSFANIRV 199          
BLAST of mRNA_S-dermatodea_contig80695.16251.1 vs. uniprot
Match: A0A7S3PRC7_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3PRC7_9STRA)

HSP 1 Score: 76.3 bits (186), Expect = 9.600e-16
Identity = 37/44 (84.09%), Postives = 42/44 (95.45%), Query Frame = 0
Query:    1 SRAIGRIAGQGGKTRHAIENATRTRIIVAEQKVHILGSFGNIKV 44
            SRAIGRIAGQGGKTR AIENATRTRI++A+QK+HILGSF NIK+
Sbjct:  158 SRAIGRIAGQGGKTRFAIENATRTRIVLADQKIHILGSFQNIKI 201          
BLAST of mRNA_S-dermatodea_contig80695.16251.1 vs. uniprot
Match: A0A2R5GT26_9STRA (Pre-rRNA-processing protein pno1 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GT26_9STRA)

HSP 1 Score: 76.3 bits (186), Expect = 1.020e-15
Identity = 36/44 (81.82%), Postives = 43/44 (97.73%), Query Frame = 0
Query:    1 SRAIGRIAGQGGKTRHAIENATRTRIIVAEQKVHILGSFGNIKV 44
            SRAIGRIAGQGGKT++AIENATRTRI+VA+Q++HILGSF NIK+
Sbjct:  162 SRAIGRIAGQGGKTKYAIENATRTRIVVADQRIHILGSFQNIKI 205          
BLAST of mRNA_S-dermatodea_contig80695.16251.1 vs. uniprot
Match: W7T9Z3_9STRA (Rna-binding protein pno1 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7T9Z3_9STRA)

HSP 1 Score: 73.2 bits (178), Expect = 3.580e-15
Identity = 37/43 (86.05%), Postives = 39/43 (90.70%), Query Frame = 0
Query:    1 SRAIGRIAGQGGKTRHAIENATRTRIIVAEQKVHILGSFGNIK 43
            SRAIGRIAGQ GKTR AIENATRTRI+VA+Q VHILGSF NIK
Sbjct:   82 SRAIGRIAGQAGKTRFAIENATRTRIVVADQHVHILGSFANIK 124          
BLAST of mRNA_S-dermatodea_contig80695.16251.1 vs. uniprot
Match: A0A835ZET5_9STRA (RNA-binding protein PNO1-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZET5_9STRA)

HSP 1 Score: 74.7 bits (182), Expect = 4.000e-15
Identity = 35/44 (79.55%), Postives = 41/44 (93.18%), Query Frame = 0
Query:    1 SRAIGRIAGQGGKTRHAIENATRTRIIVAEQKVHILGSFGNIKV 44
            SRAIGR+AGQ GKTRHAIENATRTR+IVA+ ++HILGSF NI+V
Sbjct:  163 SRAIGRVAGQDGKTRHAIENATRTRVIVADHRIHILGSFANIRV 206          
BLAST of mRNA_S-dermatodea_contig80695.16251.1 vs. uniprot
Match: B8C5R0_THAPS (KH domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C5R0_THAPS)

HSP 1 Score: 72.8 bits (177), Expect = 1.360e-14
Identity = 32/43 (74.42%), Postives = 41/43 (95.35%), Query Frame = 0
Query:    1 SRAIGRIAGQGGKTRHAIENATRTRIIVAEQKVHILGSFGNIK 43
            SRAIGR+AGQ GKTR AIENATRTR+++A+Q++H+LGS+GNIK
Sbjct:  133 SRAIGRVAGQDGKTRFAIENATRTRVVIADQRIHLLGSYGNIK 175          
BLAST of mRNA_S-dermatodea_contig80695.16251.1 vs. uniprot
Match: A0A6T5QRH5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6T5QRH5_HETAK)

HSP 1 Score: 73.2 bits (178), Expect = 1.370e-14
Identity = 34/44 (77.27%), Postives = 42/44 (95.45%), Query Frame = 0
Query:    1 SRAIGRIAGQGGKTRHAIENATRTRIIVAEQKVHILGSFGNIKV 44
            SRAIGR+AGQ GKTR+AIENATRTRI+VA+Q++HILGS+ NI+V
Sbjct:  155 SRAIGRVAGQDGKTRYAIENATRTRIVVADQRIHILGSYANIRV 198          
BLAST of mRNA_S-dermatodea_contig80695.16251.1 vs. uniprot
Match: A0A2D4BJV4_PYTIN (RNA-binding protein PNO1-like protein n=4 Tax=Pythium TaxID=4797 RepID=A0A2D4BJV4_PYTIN)

HSP 1 Score: 73.2 bits (178), Expect = 1.450e-14
Identity = 34/43 (79.07%), Postives = 41/43 (95.35%), Query Frame = 0
Query:    1 SRAIGRIAGQGGKTRHAIENATRTRIIVAEQKVHILGSFGNIK 43
            SRAIGR+AGQ GKT++AIENATRTRI++A+QK+HILGSF NIK
Sbjct:  159 SRAIGRVAGQDGKTKYAIENATRTRIVLADQKIHILGSFANIK 201          
BLAST of mRNA_S-dermatodea_contig80695.16251.1 vs. uniprot
Match: A0A8J9S7D6_PHATR (Hypothetical protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9S7D6_PHATR)

HSP 1 Score: 71.2 bits (173), Expect = 1.590e-14
Identity = 34/44 (77.27%), Postives = 41/44 (93.18%), Query Frame = 0
Query:    1 SRAIGRIAGQGGKTRHAIENATRTRIIVAEQKVHILGSFGNIKV 44
            SRAIGRIAGQ GKTR AIENATRTRI+VA+Q+VH+LGS+ N++V
Sbjct:   71 SRAIGRIAGQDGKTRFAIENATRTRIVVADQRVHLLGSYANLRV 114          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig80695.16251.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LD80_ECTSI3.540e-1895.45KH domain-containing protein n=2 Tax=Ectocarpus Ta... [more]
A0A7S2XZF6_9STRA6.630e-1681.82Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S3PRC7_9STRA9.600e-1684.09Hypothetical protein n=1 Tax=Aplanochytrium stocch... [more]
A0A2R5GT26_9STRA1.020e-1581.82Pre-rRNA-processing protein pno1 n=1 Tax=Hondaea f... [more]
W7T9Z3_9STRA3.580e-1586.05Rna-binding protein pno1 n=2 Tax=Monodopsidaceae T... [more]
A0A835ZET5_9STRA4.000e-1579.55RNA-binding protein PNO1-like protein n=1 Tax=Trib... [more]
B8C5R0_THAPS1.360e-1474.42KH domain-containing protein n=1 Tax=Thalassiosira... [more]
A0A6T5QRH5_HETAK1.370e-1477.27Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A2D4BJV4_PYTIN1.450e-1479.07RNA-binding protein PNO1-like protein n=4 Tax=Pyth... [more]
A0A8J9S7D6_PHATR1.590e-1477.27Hypothetical protein n=2 Tax=Phaeodactylum tricorn... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036612K Homology domain, type 1 superfamilyGENE3D3.30.1370.10coord: 1..44
e-value: 2.7E-12
score: 48.5
IPR036612K Homology domain, type 1 superfamilySUPERFAMILY54791Eukaryotic type KH-domain (KH-domain type I)coord: 2..43
NoneNo IPR availablePANTHERPTHR12826FAMILY NOT NAMEDcoord: 1..44

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig80695contigS-dermatodea_contig80695:512..643 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig80695.16251.1mRNA_S-dermatodea_contig80695.16251.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig80695 512..643 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig80695.16251.1 ID=prot_S-dermatodea_contig80695.16251.1|Name=mRNA_S-dermatodea_contig80695.16251.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=44bp
SRAIGRIAGQGGKTRHAIENATRTRIIVAEQKVHILGSFGNIKV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036612KH_dom_type_1_sf