prot_S-dermatodea_contig80580.16244.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig80580.16244.1
Unique Nameprot_S-dermatodea_contig80580.16244.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length40
Homology
BLAST of mRNA_S-dermatodea_contig80580.16244.1 vs. uniprot
Match: D8LTB9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTB9_ECTSI)

HSP 1 Score: 78.2 bits (191), Expect = 1.210e-16
Identity = 35/38 (92.11%), Postives = 37/38 (97.37%), Query Frame = 0
Query:    1 AFSCILCCFETHLKAVAKTIAANFGFLYNAKGRAIFLV 38
            AFSCILCCFETHLK VAKTIAANFGFLYNAKGRA+FL+
Sbjct:   95 AFSCILCCFETHLKVVAKTIAANFGFLYNAKGRAVFLI 132          
BLAST of mRNA_S-dermatodea_contig80580.16244.1 vs. uniprot
Match: A0A836CFZ2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFZ2_9STRA)

HSP 1 Score: 64.7 bits (156), Expect = 6.940e-12
Identity = 27/38 (71.05%), Postives = 33/38 (86.84%), Query Frame = 0
Query:    1 AFSCILCCFETHLKAVAKTIAANFGFLYNAKGRAIFLV 38
            AF+CILCCFETH+  +A   A+NFGFLYNAKGRA+FL+
Sbjct:   41 AFACILCCFETHISFIASLAASNFGFLYNAKGRALFLL 78          
BLAST of mRNA_S-dermatodea_contig80580.16244.1 vs. uniprot
Match: A0A482T2R9_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482T2R9_9ARCH)

HSP 1 Score: 63.2 bits (152), Expect = 3.860e-11
Identity = 25/37 (67.57%), Postives = 33/37 (89.19%), Query Frame = 0
Query:    2 FSCILCCFETHLKAVAKTIAANFGFLYNAKGRAIFLV 38
            FSC+LCCFETHLK V+K IA NFGF+Y+AK R++F++
Sbjct:   27 FSCLLCCFETHLKQVSKIIAMNFGFMYSAKSRSLFMI 63          
BLAST of mRNA_S-dermatodea_contig80580.16244.1 vs. uniprot
Match: A0A7S2WC07_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WC07_9STRA)

HSP 1 Score: 62.4 bits (150), Expect = 2.140e-10
Identity = 26/38 (68.42%), Postives = 32/38 (84.21%), Query Frame = 0
Query:    2 FSCILCCFETHLKAVAKTIAANFGFLYNAKGRAIFLVL 39
            F C++CCFETHLK V+  IA NFGF+YNAKGR IF++L
Sbjct:  132 FGCLVCCFETHLKQVSIIIADNFGFMYNAKGRFIFMIL 169          
BLAST of mRNA_S-dermatodea_contig80580.16244.1 vs. uniprot
Match: W7TT71_9STRA (Golgi apparatus membrane protein TVP15 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TT71_9STRA)

HSP 1 Score: 60.5 bits (145), Expect = 1.010e-9
Identity = 27/38 (71.05%), Postives = 32/38 (84.21%), Query Frame = 0
Query:    1 AFSCILCCFETHLKAVAKTIAANFGFLYNAKGRAIFLV 38
            AFSC+LCCFE +L+ VAK IA NFGFLY+AK RA FL+
Sbjct:  124 AFSCLLCCFEVNLRRVAKHIANNFGFLYDAKSRATFLI 161          
BLAST of mRNA_S-dermatodea_contig80580.16244.1 vs. uniprot
Match: A0A7S2MMX0_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2MMX0_9STRA)

HSP 1 Score: 58.5 bits (140), Expect = 5.290e-9
Identity = 24/38 (63.16%), Postives = 30/38 (78.95%), Query Frame = 0
Query:    2 FSCILCCFETHLKAVAKTIAANFGFLYNAKGRAIFLVL 39
            F C+ CC+ETHLK V+  IA NFGFLYNAK R +F++L
Sbjct:  131 FGCLFCCYETHLKQVSVFIADNFGFLYNAKARCLFMML 168          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig80580.16244.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D8LTB9_ECTSI1.210e-1692.11Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CFZ2_9STRA6.940e-1271.05Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A482T2R9_9ARCH3.860e-1167.57Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
A0A7S2WC07_9STRA2.140e-1068.42Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
W7TT71_9STRA1.010e-971.05Golgi apparatus membrane protein TVP15 n=1 Tax=Nan... [more]
A0A7S2MMX0_9STRA5.290e-963.16Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR38894FAMILY NOT NAMEDcoord: 2..39

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig80580contigS-dermatodea_contig80580:120..239 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig80580.16244.1mRNA_S-dermatodea_contig80580.16244.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig80580 120..239 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig80580.16244.1 ID=prot_S-dermatodea_contig80580.16244.1|Name=mRNA_S-dermatodea_contig80580.16244.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=40bp
AFSCILCCFETHLKAVAKTIAANFGFLYNAKGRAIFLVL*
back to top