mRNA_S-dermatodea_contig8057.16241.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig8057.16241.1 vs. uniprot
Match: D8LSZ5_ECTSI (Glycosyltransferase, family GT64 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LSZ5_ECTSI) HSP 1 Score: 400 bits (1028), Expect = 1.140e-134 Identity = 205/322 (63.66%), Postives = 235/322 (72.98%), Query Frame = 1
Query: 1 RRLAVWACYAACFL-LACMFTLAWLRTIAMAKVVSEATMEGLAKASEEGASFTVLLNTFKRPRQLEGALHHYARCDGVESVRVAWSEPSPPPDPADSPQLFDFPRPVRFHPYPTTSINNRFIPPQNLLTEAVFVVDDDIAVPCDHLLAAFGTWRRHPDTLVGFFPRSHAHR-----------GDGVWEYLYFWRVLWNMEYSMVLTKAAFVHAKYLELYSG-----------VTGEGEQGADGGGSDWDPTMVEAMAQTRDYVDSHRNCEDIAMQMAVTSVSGLPPVAAFAPVVDIGLFGGISTGEGSGKWWQAPHAMKRSR 897
RR + AC C L + F W R +AMA+V S A+ A +G FT+++NTF+RPRQ+E A+ HYA+C VESVRVAWSEPSPPPD SP LFD PRPV+ H YPTTSINNRF+PP +L+TEAVFVVDDDIAVPC+HLL+AF TW++HPDTLVGFFPRSH+++ G+G WEYLYFWRVLW+MEYS++LTKAAFVHAKYLELYS GS W V AM +TR YVDSHRNCEDIAMQMAVTSVSGLPPVAAFAPVVD+GLFGGIS GEGSGKWWQAPHA KRSR
Sbjct: 73 RRAVLAACGGWCLLSIGGAFLFIWFRAVAMARVASSASSS--AAVDRQGGMFTIVVNTFERPRQMEEAVRHYAKCPSVESVRVAWSEPSPPPDATTSPLLFDHPRPVKIHAYPTTSINNRFMPPSDLMTEAVFVVDDDIAVPCEHLLSAFNTWQQHPDTLVGFFPRSHSYQPPTAAGVKEDGGNGNWEYLYFWRVLWSMEYSIILTKAAFVHAKYLELYSSGXXXXXXXXXXXXXXXXXXXXSAGSAWSEATVRAMVKTRAYVDSHRNCEDIAMQMAVTSVSGLPPVAAFAPVVDVGLFGGISIGEGSGKWWQAPHAKKRSR 392
BLAST of mRNA_S-dermatodea_contig8057.16241.1 vs. uniprot
Match: A0A7S2UU95_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UU95_9STRA) HSP 1 Score: 180 bits (456), Expect = 5.410e-50 Identity = 98/251 (39.04%), Postives = 137/251 (54.58%), Query Frame = 1
Query: 151 FTVLLNTFKRPRQLEGALHHYARCDGVESVRVAWSEPSPPPDPADSPQLFDFPRPVRFHPYPTTSINNRFIPPQNLLTEAVFVVDDDIAVPCDHLLAAFGTWRRHPDTLVGFFPRSHAHRGDGV---WEYLYFWRVLWNMEYSMVLTKAAFVHAKYLELYSGVTGEGEQGADGGGSDWDPTMVEAMAQTRDYVDSHRNCEDIAMQMAVTSVSGLPPVAAFAPVVDIGLFGGISTGEGSGKWWQAPHAMKRS 894
+TV++NT++RP L A+ HY RC +S+RV WSE PP P ++ V +H +P S+N+RF P + L TE++F VDDD+ V CD L AF WR P TLVGF PR+H G W Y +W+V W+ EYS+++TKAAF+H +L+LY+ + + RDYVD NCEDIAMQ V + +GLPP + D+G F G+S + W + H R+
Sbjct: 97 YTVVVNTYRRPDMLARAIDHYGRCRRTDSIRVIWSESEFPPVPEVDADMYSPFTEVIYHIHPENSLNDRFEPLEGLRTESIFSVDDDMMVSCDDLDFAFEVWRNQPRTLVGFMPRTHTLVDGGFFKQWVYNCWWKVWWDGEYSIIITKAAFLHRDFLDLYT---------------------FKMPQEIRDYVDDKMNCEDIAMQFLVANETGLPPTYVRGALADLGAFNGLS----AKSWNKGGHMAARN 322
BLAST of mRNA_S-dermatodea_contig8057.16241.1 vs. uniprot
Match: C1MT97_MICPC (Glycosyltransferase family 64 protein n=1 Tax=Micromonas pusilla (strain CCMP1545) TaxID=564608 RepID=C1MT97_MICPC) HSP 1 Score: 174 bits (440), Expect = 1.400e-48 Identity = 106/247 (42.91%), Postives = 135/247 (54.66%), Query Frame = 1
Query: 130 ASEEGASFTVLLNTFKRPRQLEGALHHYARCDGVESVRVAWSEPSPPPDPAD-SPQLF---DFPRPVRFHPYPTTSINNRFIPPQ----------NLLTEAVFVVDDDIAVPCDHLLAAFGTWRRHPDTLVGFFPRSHAH--RGDG---VWEYLYFWRVLWNMEYSMVLTKAAFVHAKYLELYS-GVTGEGEQGADGGGSDWDPTMVEAMAQTRDYVDSHRNCEDIAMQMAVTSVSGLPPVAAFAPV 810
A E+ FT+LLNTFKR L+ A+ HY CD V +RV WSEP PPPDP D +L+ D + VR+ +PTTSI NRF PP L AVF VD+D+ +PC L F WR + + LVGF+PR+H RG G W L WR E+S++LTKAAF+HAKYL YS G+ E R+Y+D +NCEDIAMQ+ VT +G+PPV P+
Sbjct: 44 AGEDDRQFTLLLNTFKRRDLLKRAIKHYLSCDDVGEIRVVWSEPDPPPDPTDRDARLYYGDDPSKEVRYQRHPTTSIQNRFEPPSAGVDGDATSGKLKHTAVFNVDEDVRLPCKALTRGFDAWRANREQLVGFYPRNHVRSDRGCGYRYAWNDLELWR---GGEFSIILTKAAFMHAKYLNTYSKGLPRE----------------------AREYIDRRKNCEDIAMQILVTKTTGIPPVYKALPM 265
BLAST of mRNA_S-dermatodea_contig8057.16241.1 vs. uniprot
Match: A0A7R9TU34_MICPS (Hypothetical protein (Fragment) n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7R9TU34_MICPS) HSP 1 Score: 174 bits (440), Expect = 2.200e-48 Identity = 106/247 (42.91%), Postives = 135/247 (54.66%), Query Frame = 1
Query: 130 ASEEGASFTVLLNTFKRPRQLEGALHHYARCDGVESVRVAWSEPSPPPDPAD-SPQLF---DFPRPVRFHPYPTTSINNRFIPPQ----------NLLTEAVFVVDDDIAVPCDHLLAAFGTWRRHPDTLVGFFPRSHAH--RGDG---VWEYLYFWRVLWNMEYSMVLTKAAFVHAKYLELYS-GVTGEGEQGADGGGSDWDPTMVEAMAQTRDYVDSHRNCEDIAMQMAVTSVSGLPPVAAFAPV 810
A E+ FT+LLNTFKR L+ A+ HY CD V +RV WSEP PPPDP D +L+ D + VR+ +PTTSI NRF PP L AVF VD+D+ +PC L F WR + + LVGF+PR+H RG G W L WR E+S++LTKAAF+HAKYL YS G+ E R+Y+D +NCEDIAMQ+ VT +G+PPV P+
Sbjct: 113 AGEDDRQFTLLLNTFKRRDLLKRAIKHYLSCDDVGEIRVVWSEPDPPPDPTDRDARLYYGDDPSKEVRYQRHPTTSIQNRFEPPSAGVDGDATSGKLKHTAVFNVDEDVRLPCKALTRGFDAWRANREQLVGFYPRNHVRSDRGCGYRYAWNDLELWR---GGEFSIILTKAAFMHAKYLNTYSKGLPRE----------------------AREYIDRRKNCEDIAMQILVTKTTGIPPVYKALPM 334
BLAST of mRNA_S-dermatodea_contig8057.16241.1 vs. uniprot
Match: A0A7S3XLL0_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XLL0_HETAK) HSP 1 Score: 172 bits (437), Expect = 7.640e-48 Identity = 100/252 (39.68%), Postives = 138/252 (54.76%), Query Frame = 1
Query: 151 FTVLLNTFKRPRQLEGALHHYARCDGVESVRVAWSEPSP-PPDPADSPQLFDFPRPVRFHPYPTTSINNRFIPPQNLLTEAVFVVDDDIAVPCDHLLAAFGTWRRHPDTLVGFFPRSHAHRG-DGVWEYLY--FWRVLWNMEYSMVLTKAAFVHAKYLELYSGVTGEGEQGADGGGSDWDPTMVEAMAQTRDYVDSHRNCEDIAMQMAVTSVSGLPPVAAFAPVVDIGLFGGISTGEGSGKWWQAPHAMKRS 894
+T+++NTF+RP L + HY C ES+RV WS+ PP P PQLF + V + T S+NNRF P +L T AVF VDDDI VPC L AF W+ P ++VGF PR+H D V +Y Y +W+V W+ YSM+LTKAAF+H Y++LY+ +G + +VD+ +NCEDIAM V + + LPP+ + D G+F GIST S W H ++R+
Sbjct: 47 YTIVVNTFRRPDMLAKFIKHYQTCPRAESIRVVWSDQQNYPPVPESDPQLFSRFKKVVYQIQETDSLNNRFRPIDDLKTNAVFHVDDDIKVPCSDLDFAFEVWQNSPKSMVGFMPRTHTPIFVDSVLQYTYNCWWKVWWDGSYSMILTKAAFLHKDYMDLYTNHMPQG---------------------IKKFVDAGKNCEDIAMSFMVANETNLPPIYVRGSLQDHGVFNGIST---SKSWTSGGHMVERN 274
BLAST of mRNA_S-dermatodea_contig8057.16241.1 vs. uniprot
Match: A0A3B6SQS7_WHEAT (Glyco_transf_64 domain-containing protein n=6 Tax=Triticeae TaxID=147389 RepID=A0A3B6SQS7_WHEAT) HSP 1 Score: 163 bits (412), Expect = 2.240e-44 Identity = 113/297 (38.05%), Postives = 152/297 (51.18%), Query Frame = 1
Query: 25 YAACFLLACMFTLAWLRTIAMAKVVSEATMEGLAKASEEGASFTVLLNTFKRPRQLEGALHHYARCDGVESVRVAWSEPSPPPDPADSPQLFDFPRPVR--FHPYPTTSINNRFIPPQNLLTEAVFVVDDDIAVPCDHLLAAFGTWRRHPDTLVGFFPRSH--AHRGDGVWEYLY--FWRVLWNMEYSMVLTKAAFVHAKYLELYSGVTGEGEQGADGGGSDWDPTMVEAMAQTRDYVDSHRNCEDIAMQMAVTSVSGLPPVAAFAPVVDIGLFGGISTGEGSGKWWQAPHAMKRSR 897
+AACFL AC+ LA + + + + A AS G+ + V++NT+KR L+ A+ HY+ C GV++V V WSEP PP+ L V F S+NNRF P Q L T+AVF VDDD+ VPC L AFG W+ P +VGF PR H A EY Y +W V YSMVL+KA+F+H +YL LY+ + RDYV +RNCEDIAM V +V+G PP+ + +IG GIS+ +G H ++RSR
Sbjct: 43 FAACFL-ACLLALAAGAILMLCITLHRPEPDASAAASPRGSGYAVVINTWKRYHLLKRAVAHYSVCAGVDAVHVVWSEPQEPPEALRRSVLNCSHAAVNVGFVMNRGNSLNNRFRPIQGLRTDAVFSVDDDLVVPCSTLRFAFGVWQSAPSAMVGFVPRMHWPADPRGNTEEYRYGSWWSVWRTGTYSMVLSKASFLHKRYLNLYTN---------------------RMLPSIRDYVTENRNCEDIAMSFLVANVTGAPPIWVQGRIFEIGS-SGISSLKG--------HDLRRSR 308
BLAST of mRNA_S-dermatodea_contig8057.16241.1 vs. uniprot
Match: A0A7S0RKN5_9CHLO (Hypothetical protein n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0RKN5_9CHLO) HSP 1 Score: 163 bits (413), Expect = 2.340e-44 Identity = 98/236 (41.53%), Postives = 130/236 (55.08%), Query Frame = 1
Query: 148 SFTVLLNTFKRPRQLEGALHHYARCDGVESVRVAWSEPSPPP---DPADSPQLFDFPR-PVRFHPYPTTSINNRFIPPQNLLTEAVFVVDDDIAVPCDHLLAAFGTWRRHPDTLVGFFPRSHAHRGDGVWEYLYFWRVLWNMEYSMVLTKAAFVHAKYLELYSGVTGEGEQGADGGGSDWDPTMVEAMAQTRDYVDSHRNCEDIAMQMAVTSVSGLPPVAAFAPVVDIGLFGGIST 843
++TVL+NTFKRP L+ ++ HYA C V+++RV WS+ P + DS F P VR+ +P+TS+NNRF P L TEAVF VDDD+ V C L A W++ P+ LVGF PR+ G + Y +W VL YS++LTKA F+H YLELY+ T+ A+ D++D RNCEDIAMQ AV + +G PV D G GIST
Sbjct: 83 AYTVLVNTFKRPDLLKKSIRHYASCPNVDAIRVVWSDQDNAPPIIEGGDSDAQFFSPCVDVRYDQHPSTSLNNRFKPLAGLRTEAVFNVDDDVNVDCSSLDFAHQAWQQTPEALVGFIPRTSRQTAPGKYLYRRWWTVLMEGAYSIILTKACFMHRDYLELYT------------------RTVPPAIT---DFIDRGRNCEDIAMQFAVANATGKAPVWVSGRYTDSGWMDGIST 297
BLAST of mRNA_S-dermatodea_contig8057.16241.1 vs. uniprot
Match: C1E8N5_MICCC (Glycosyltransferase family 64 protein (Fragment) n=2 Tax=Micromonas TaxID=38832 RepID=C1E8N5_MICCC) HSP 1 Score: 157 bits (398), Expect = 2.150e-43 Identity = 94/229 (41.05%), Postives = 125/229 (54.59%), Query Frame = 1
Query: 151 FTVLLNTFKRPRQLEGALHHYARCDGVESVRVAWSEPSPPPDPADSPQLFDFPRP--VRFHPYPTTSINNRFIPPQN---LLTEAVFVVDDDIAVPCDHLLAAFGTWRRHPDTLVGFFPRSHAHRGDGV-WEYLYFWRVLWNM-EYSMVLTKAAFVHAKYLELYSGVTGEGEQGADGGGSDWDPTMVEAMAQT-RDYVDSHRNCEDIAMQMAVTSVSGLPPVAAFAPVV 813
FTVLLNTFKR L+ A+ HYA C V +RV WSE PPP + + P+P V + +PTTSI NRF PP + T AVF VDDD+ +PC L F WR + D LVG++PR+H G W Y++ LW ++S+VLTKAAF+ Y+ LYS E + Q+ R Y+D ++NCEDIAMQ+ ++G PPV P +
Sbjct: 1 FTVLLNTFKRRDLLKKAVAHYATCADVAEIRVVWSEQVPPPTRGEENGAYFGPKPSMVTYDTHPTTSIQNRFDPPSGSNAISTRAVFNVDDDVRMPCAALTRGFDAWRANEDVLVGYYPRTHKPDDAGCGWRYVWDDFSLWRHGDFSIVLTKAAFMRTGYMSLYS----------------------EGLPQSARRYIDEYKNCEDIAMQILTAKITGKPPVYVPVPTM 207
BLAST of mRNA_S-dermatodea_contig8057.16241.1 vs. uniprot
Match: A0A7C9DE75_OPUST (Glyco_transf_64 domain-containing protein n=1 Tax=Opuntia streptacantha TaxID=393608 RepID=A0A7C9DE75_OPUST) HSP 1 Score: 159 bits (403), Expect = 7.130e-43 Identity = 101/271 (37.27%), Postives = 137/271 (50.55%), Query Frame = 1
Query: 133 SEEGASFTVLLNTFKRPRQLEGALHHYARCDGVESVRVAWSEPSPPPDP------------ADSPQLFDFPRPVRFHPYPTTSINNRFIPPQNLLTEAVFVVDDDIAVPCDHLLAAFGTWRRHPDTLVGFFPRSH----AHRGDGVWEYLYFWRVLWNMEYSMVLTKAAFVHAKYLELYSGVTGEGEQGADGGGSDWDPTMVEAMAQTRDYVDSHRNCEDIAMQMAVTSVSGLPPVAAFAPVVDIGLFGGISTGEGSGKWWQAPHAMKRSR 897
S G +TVL+NT+KR L+ ++ HYA C G +++ V WSE PP D +++ +F +F ++NNRF P Q L T A+F VDDD+ VPCD L AF W+ P T+VGF PR H G +EY +W V W YSMVL+KAAF H+KYL++YS E A DYV RNCEDIAM + V + +G PP+ + +IG GIS+ +G H+ KR +
Sbjct: 89 SPSGGGYTVLVNTWKRNSLLKKSVAHYASCRGTDAIHVVWSESDPPSDSLKAYLNNIVMSKSETAHKPNF----KFDINKEDNLNNRFKPIQGLRTRAIFSVDDDVIVPCDSLDFAFTVWQTAPSTMVGFVPRMHWLGEKKNGRTFYEYGGWWSVWWMGTYSMVLSKAAFFHSKYLDIYSN---------------------EMSASIHDYVARERNCEDIAMSLLVANATGAPPIWVKGKIYEIGS-SGISSLKG--------HSTKRQK 325
BLAST of mRNA_S-dermatodea_contig8057.16241.1 vs. uniprot
Match: A0A059BIC3_EUCGR (Glyco_transf_64 domain-containing protein n=4 Tax=Myrtoideae TaxID=1699513 RepID=A0A059BIC3_EUCGR) HSP 1 Score: 159 bits (401), Expect = 7.970e-43 Identity = 97/251 (38.65%), Postives = 134/251 (53.39%), Query Frame = 1
Query: 151 FTVLLNTFKRPRQLEGALHHYARCDGVESVRVAWSEPSPPPDPADSPQLF-----------DFPRPVRFHPYPTTSINNRFIPPQNLLTEAVFVVDDDIAVPCDHLLAAFGTWRRHPDTLVGFFPRSHAHRGDG-VWEYLY--FWRVLWNMEYSMVLTKAAFVHAKYLELYSGVTGEGEQGADGGGSDWDPTMVEAMAQTRDYVDSHRNCEDIAMQMAVTSVSGLPPVAAFAPVVDIGLFGGISTGEGSGK 861
+ +L+NT+KR L+ ++ HY RC ++S+ + WSEP PP ++S + F D+ ++F S+NNRF P +L T+AVF +DDDI PC + AF WR PDT+VGF PR H +G V Y+Y +W V W YSMVL+KAAF H KYL++Y+ + A RDYV +RNCEDIAM V +V+G PP+ + +IG G S G S K
Sbjct: 72 YALLINTWKRNDLLKQSISHYTRCSSLDSIHIVWSEPDPP---SESLKKFLNHVIQLNSRSDWRIELKFDINKEDSLNNRFKPIGDLKTDAVFSIDDDIIFPCSSVEFAFDVWRSAPDTMVGFVPRIHWIDQEGSVDRYVYSGWWSVWWTGRYSMVLSKAAFFHKKYLDIYTN---------------------QMPASIRDYVTRNRNCEDIAMSFLVANVTGAPPIWVKGKIFEIGSTGISSVGGHSEK 298 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig8057.16241.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig8057.16241.1 >prot_S-dermatodea_contig8057.16241.1 ID=prot_S-dermatodea_contig8057.16241.1|Name=mRNA_S-dermatodea_contig8057.16241.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=299bp RRLAVWACYAACFLLACMFTLAWLRTIAMAKVVSEATMEGLAKASEEGASback to top mRNA from alignment at S-dermatodea_contig8057:997..9045+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig8057.16241.1 ID=mRNA_S-dermatodea_contig8057.16241.1|Name=mRNA_S-dermatodea_contig8057.16241.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=8049bp|location=Sequence derived from alignment at S-dermatodea_contig8057:997..9045+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig8057:997..9045+ >mRNA_S-dermatodea_contig8057.16241.1 ID=mRNA_S-dermatodea_contig8057.16241.1|Name=mRNA_S-dermatodea_contig8057.16241.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1794bp|location=Sequence derived from alignment at S-dermatodea_contig8057:997..9045+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |