mRNA_S-dermatodea_contig805.16233.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig805.16233.1 vs. uniprot
Match: A0A6H5K449_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K449_9PHAE) HSP 1 Score: 87.0 bits (214), Expect = 8.210e-19 Identity = 40/70 (57.14%), Postives = 54/70 (77.14%), Query Frame = 1
Query: 37 EDVGLWGPNGLLATPYVKLFLLLGFVTQYVRIGYQEVYPLWVLSTEDVGGLNWGTKRIGEVLGVSGLLMA 246
+++G+ GP+GLLATP+VK+ LLL + V IG+ EVYPL+ LST DVGGL W T IG+VL ++G+LMA
Sbjct: 42 DELGILGPSGLLATPHVKMVLLLTCIISTVSIGFDEVYPLFALSTPDVGGLGWSTVEIGKVLVMTGVLMA 111
BLAST of mRNA_S-dermatodea_contig805.16233.1 vs. uniprot
Match: D8LJX7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJX7_ECTSI) HSP 1 Score: 88.6 bits (218), Expect = 8.730e-19 Identity = 40/71 (56.34%), Postives = 55/71 (77.46%), Query Frame = 1
Query: 34 EEDVGLWGPNGLLATPYVKLFLLLGFVTQYVRIGYQEVYPLWVLSTEDVGGLNWGTKRIGEVLGVSGLLMA 246
EE++G++G +GLL TP+VK L LG V Q ++IG++E YPL+ LST DVGGL W T +IG+VL ++GL MA
Sbjct: 158 EEEIGIFGRHGLLVTPHVKTLLTLGCVVQALQIGFEEAYPLFALSTPDVGGLGWNTFQIGKVLVMTGLFMA 228
BLAST of mRNA_S-dermatodea_contig805.16233.1 vs. uniprot
Match: D7G0M0_ECTSI (MFS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0M0_ECTSI) HSP 1 Score: 88.6 bits (218), Expect = 1.090e-18 Identity = 41/72 (56.94%), Postives = 54/72 (75.00%), Query Frame = 1
Query: 34 EEDVGLWGPNGLLATPYVKLFLLLGFVTQYVRIGYQEVYPLWVLSTEDVGGLNWGTKRIGEVLGVSGLLMAV 249
+E+ GL+GP GLLA P+VKL L LG + + IG+ EVYPL+ LST VGGL W T +IG+V+ V+GLL+AV
Sbjct: 322 DEEQGLFGPGGLLARPHVKLVLFLGCIIATLAIGFDEVYPLYALSTPSVGGLGWNTVQIGQVMVVAGLLLAV 393
BLAST of mRNA_S-dermatodea_contig805.16233.1 vs. uniprot
Match: A0A6H5K5T8_9PHAE (MFS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5T8_9PHAE) HSP 1 Score: 87.8 bits (216), Expect = 2.060e-18 Identity = 40/71 (56.34%), Postives = 54/71 (76.06%), Query Frame = 1
Query: 34 EEDVGLWGPNGLLATPYVKLFLLLGFVTQYVRIGYQEVYPLWVLSTEDVGGLNWGTKRIGEVLGVSGLLMA 246
EE++G++G +GLLATP+VK L LG V ++IG+ E YPL+ LST DVGGL W T +IG+VL ++GL MA
Sbjct: 326 EEEIGIFGRHGLLATPHVKTLLTLGCVVMALQIGFDEAYPLFALSTPDVGGLGWNTLQIGKVLVMTGLFMA 396
BLAST of mRNA_S-dermatodea_contig805.16233.1 vs. uniprot
Match: D8LJK9_ECTSI (MFS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJK9_ECTSI) HSP 1 Score: 85.1 bits (209), Expect = 1.770e-17 Identity = 44/84 (52.38%), Postives = 54/84 (64.29%), Query Frame = 1
Query: 1 GSHGVSTPVVSE-EDVGLWGPNGLLATPYVKLFLLLGFVTQYVRIGYQEVYPLWVLSTEDVGGLNWGTKRIGEVLGVSGLLMAV 249
G H PV S E+ GL GP GLL+ P VK L L V Q + G++EV+PLW LST VGGL+WGT IG+VL +SG +M V
Sbjct: 252 GLHAREPPVTSNREEQGLCGPGGLLSVPRVKPLLFLVCVVQSLLAGFEEVFPLWALSTVGVGGLDWGTMEIGKVLFLSGCIMVV 335
BLAST of mRNA_S-dermatodea_contig805.16233.1 vs. uniprot
Match: A0A6H5JRQ3_9PHAE (MFS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRQ3_9PHAE) HSP 1 Score: 84.3 bits (207), Expect = 3.410e-17 Identity = 40/67 (59.70%), Postives = 50/67 (74.63%), Query Frame = 1
Query: 46 GLWGPNGLLATPYVKLFLLLGFVTQYVRIGYQEVYPLWVLSTEDVGGLNWGTKRIGEVLGVSGLLMA 246
GL GP+GLLATP+VK+ L L + V IG+ EVYPL+ LST DVGGL W T IG+VL ++G+LMA
Sbjct: 380 GLLGPSGLLATPHVKMVLFLTCIISTVSIGFDEVYPLFALSTPDVGGLGWSTVEIGKVLVMTGVLMA 446
BLAST of mRNA_S-dermatodea_contig805.16233.1 vs. uniprot
Match: A0A6H5JH24_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH24_9PHAE) HSP 1 Score: 80.5 bits (197), Expect = 6.530e-16 Identity = 37/71 (52.11%), Postives = 52/71 (73.24%), Query Frame = 1
Query: 37 EDVGLWGPNGLLATPYVKLFLLLGFVTQYVRIGYQEVYPLWVLSTEDVGGLNWGTKRIGEVLGVSGLLMAV 249
++ L+GP GLLA +VKL L LG ++ + IG+ EVYPL+ LST VGGL W T +IG+VL ++GL++AV
Sbjct: 153 DEQSLFGPGGLLARRHVKLVLFLGCISATLAIGFDEVYPLYALSTPSVGGLGWNTVQIGQVLVMAGLMLAV 223
BLAST of mRNA_S-dermatodea_contig805.16233.1 vs. uniprot
Match: A0A6H5JAX4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAX4_9PHAE) HSP 1 Score: 80.1 bits (196), Expect = 1.040e-15 Identity = 42/77 (54.55%), Postives = 50/77 (64.94%), Query Frame = 1
Query: 22 PVVSE-EDVGLWGPNGLLATPYVKLFLLLGFVTQYVRIGYQEVYPLWVLSTEDVGGLNWGTKRIGEVLGVSGLLMAV 249
PV S E G GP GLL+ P VK L L V Q + G++EV+PLW LST VGGL+WGT IG+VL VSG +M V
Sbjct: 296 PVTSNREQQGHCGPGGLLSVPRVKPLLFLVCVVQSLLAGFEEVFPLWALSTVGVGGLDWGTMEIGKVLFVSGCIMVV 372
BLAST of mRNA_S-dermatodea_contig805.16233.1 vs. uniprot
Match: D8LET0_ECTSI (Major facilitator superfamily n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LET0_ECTSI) HSP 1 Score: 77.4 bits (189), Expect = 3.580e-15 Identity = 38/77 (49.35%), Postives = 51/77 (66.23%), Query Frame = 1
Query: 22 PVV-SEEDVGLWGPNGLLATPYVKLFLLLGFVTQYVRIGYQEVYPLWVLSTEDVGGLNWGTKRIGEVLGVSGLLMAV 249
PV+ + E+ L GP GLL+ P +K L L V Q + G++EV+PLW LST VGGL WGT IG+VL ++G +M V
Sbjct: 23 PVIRNREEQRLCGPGGLLSVPRIKPLLFLVCVVQSLLTGFEEVFPLWALSTVGVGGLGWGTMEIGKVLFMTGCIMVV 99
BLAST of mRNA_S-dermatodea_contig805.16233.1 vs. uniprot
Match: D8LP17_ECTSI (MFS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP17_ECTSI) HSP 1 Score: 65.1 bits (157), Expect = 1.930e-10 Identity = 31/69 (44.93%), Postives = 43/69 (62.32%), Query Frame = 1
Query: 13 VSTPVVSEE-DVGLWGPNGLLATPYVKLFLLLGFVTQYVRIGYQEVYPLWVLSTEDVGGLNWGTKRIGE 216
V P +EE + G+ GLL+TP VK+ + + + Q IG+ EVYPLW +ST DVGGL W +IG+
Sbjct: 338 VPGPSRAEEIEPGMCEAGGLLSTPNVKMVIFIAAMAQMSSIGFDEVYPLWAVSTTDVGGLGWAPVQIGK 406 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig805.16233.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 13
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig805.16233.1 >prot_S-dermatodea_contig805.16233.1 ID=prot_S-dermatodea_contig805.16233.1|Name=mRNA_S-dermatodea_contig805.16233.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=83bp GSHGVSTPVVSEEDVGLWGPNGLLATPYVKLFLLLGFVTQYVRIGYQEVYback to top mRNA from alignment at S-dermatodea_contig805:17339..18205- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig805.16233.1 ID=mRNA_S-dermatodea_contig805.16233.1|Name=mRNA_S-dermatodea_contig805.16233.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=867bp|location=Sequence derived from alignment at S-dermatodea_contig805:17339..18205- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig805:17339..18205- >mRNA_S-dermatodea_contig805.16233.1 ID=mRNA_S-dermatodea_contig805.16233.1|Name=mRNA_S-dermatodea_contig805.16233.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=498bp|location=Sequence derived from alignment at S-dermatodea_contig805:17339..18205- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |