prot_S-dermatodea_contig8049.16231.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig8049.16231.1
Unique Nameprot_S-dermatodea_contig8049.16231.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length381
Homology
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BLAST of mRNA_S-dermatodea_contig8049.16231.1 vs. uniprot
Match: A0A6H5KQB6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KQB6_9PHAE)

HSP 1 Score: 394 bits (1011), Expect = 7.080e-124
Identity = 211/387 (54.52%), Postives = 259/387 (66.93%), Query Frame = 0 
Query:    1 NQDDEDVHLTVTPMGGNPSLYAGMGAVPVCSDSDKSA-------ISDEDFVCRFWTWSCTDGARRTIPISAANPCEVDDQISPFPPPTETPENGNGKDAAAGDDADDDDRVGGDGGSVSHVTVSEDCALSSFGVGMMFLTVAAQDGSGATFTVMASLLGRHTTLVEARPQHAFTSPMIPCGGV-QTNGGDSPCSSRYETSSTMQEALFVFKVAAGSIAAETGFALSLVPECDERLCTGVTCPVGCPERPAKVYVKSCVEGGCLAGDRYPSQGNADAEFQVSSTHSTIFVADALGTAGDGMLCNPTAKGAQTCLYYIGVTAGDADERKMRLTATALTPRGLSVATPCLEEGMLPDGMIVMPASRLPSSGMKIYEVCTKGTIDFEVGVK 379
            +QD+ D+ LTVTPM G+P+LYAGMGA P C+  ++               VC  WTWSCT G RR IPIS  +PC+V D+           ++  G D              G+G   S+V VS+ CA SSFGVGMMF+TV AQ G  A+F+VMASL+G+H TLV   PQHA TSPM+PCG   QT  G  PCS+ YETSS MQEALFVFKV AGS+AA TGF+LSLVPEC    C G TC  GCP RPAKVYVKSC E  CL  DR+PSQG+ D EF+VSS   ++F+AD  G+AGDG+ C P+  G   C+YYI VTAG ADE  M+LTATA  P G+S+  PC+ +  LPDGMIV PA+R+P SGMK+YE+C+KG +DF+V V+
Sbjct:  380 DQDNVDLQLTVTPMRGDPALYAGMGATPSCAAPEEGGEXXXXXXXXXXXXVCSGWTWSCTSGGRRNIPISHLHPCDVLDE-------QHQGDSAEGGDXXXXXXXXXXXXXXGEGVPTSNVEVSDKCAPSSFGVGMMFMTVVAQGGMDASFSVMASLVGKHVTLVTGVPQHAVTSPMVPCGEAKQTEQG--PCSAEYETSSVMQEALFVFKVGAGSVAATTGFSLSLVPECAPGSCGGPTCASGCPRRPAKVYVKSCPEDKCLPEDRFPSQGSRDKEFEVSSADGSVFIADGRGSAGDGVFCVPSKHG--DCVYYIAVTAGGADEPAMQLTATADVPTGVSLVVPCIGDSSLPDGMIVNPANRVPLSGMKLYELCSKGEVDFQVSVE 755
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig8049.16231.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KQB6_9PHAE7.080e-12454.52Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig8049contigS-dermatodea_contig8049:37..6686 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig8049.16231.1mRNA_S-dermatodea_contig8049.16231.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig8049 37..6686 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig8049.16231.1 ID=prot_S-dermatodea_contig8049.16231.1|Name=mRNA_S-dermatodea_contig8049.16231.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=381bp
NQDDEDVHLTVTPMGGNPSLYAGMGAVPVCSDSDKSAISDEDFVCRFWTW
SCTDGARRTIPISAANPCEVDDQISPFPPPTETPENGNGKDAAAGDDADD
DDRVGGDGGSVSHVTVSEDCALSSFGVGMMFLTVAAQDGSGATFTVMASL
LGRHTTLVEARPQHAFTSPMIPCGGVQTNGGDSPCSSRYETSSTMQEALF
VFKVAAGSIAAETGFALSLVPECDERLCTGVTCPVGCPERPAKVYVKSCV
EGGCLAGDRYPSQGNADAEFQVSSTHSTIFVADALGTAGDGMLCNPTAKG
AQTCLYYIGVTAGDADERKMRLTATALTPRGLSVATPCLEEGMLPDGMIV
MPASRLPSSGMKIYEVCTKGTIDFEVGVKI*
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