prot_S-dermatodea_contig8037.16222.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig8037.16222.1
Unique Nameprot_S-dermatodea_contig8037.16222.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length251
Homology
BLAST of mRNA_S-dermatodea_contig8037.16222.1 vs. uniprot
Match: D8LBV1_ECTSI (G-patch domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBV1_ECTSI)

HSP 1 Score: 152 bits (385), Expect = 3.270e-41
Identity = 124/293 (42.32%), Postives = 147/293 (50.17%), Query Frame = 0
Query:    1 MMNRMGYRRGEGLGKEKQGIARPVPIRVLPERRALDHLRVD---GGXXXXXPGAGARKHKSKPGAASSLDTHEPQKA--------MFDFLNVTIHASAKGKVGPGNNSLRPVSQARPSLAGRR--PVFD--GASRAGSGXXXXXXXXERKGSAEXXAVGSASAAGNGAAPAKNAA-----------------------DMSRSELRSHVVGAREAEVALAAKVARLEETVERNSERDPRIAAAARQKLEEIRAQGRQVRASRDRAERVLGDRGSSKGKGGG-----KGGLFSF 250
            MMNRMGYRRGEGLGKEKQGI+RPVPIRVLPERR LDHLRVD   GG      G   +                            MF+FLN T+HAS   +   G       S     L G+R  P+FD  GAS + S             S       +A+ AG   A  K+                          MS++ELRSH+VGAREAE  LAAK+ RL+ET+ RN E DPR AA ARQKL+++  Q ++VR SR RAER L +RG   GK        K GLFSF
Sbjct:   41 MMNRMGYRRGEGLGKEKQGISRPVPIRVLPERRTLDHLRVDDVGGGKTARSVGGDGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXMFNFLNKTMHASMSKRKAEGXXXXXXASP----LPGQRIRPLFDAGGASYSSSAAT----------STSIPTATTAAGAGTAHALRKSGVFPDKKRDGGXXXXXXXXXXXXXXRMSQAELRSHLVGAREAEATLAAKIGRLKETISRNEELDPRTAAQARQKLKQVCQQAKEVRDSRGRAERALENRGGGGGKXXXXXXXXKAGLFSF 319          
BLAST of mRNA_S-dermatodea_contig8037.16222.1 vs. uniprot
Match: A0A6H5KPC0_9PHAE (Zinc finger CCCH-type with G patch domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPC0_9PHAE)

HSP 1 Score: 143 bits (361), Expect = 1.180e-35
Identity = 113/265 (42.64%), Postives = 134/265 (50.57%), Query Frame = 0
Query:    1 MMNRMGYRRGEGLGKEKQGIARPVPIRVLPERRALDHLRVD-----------GGXXXXXPGAGARKHKSKPGAASSLDTHEPQKAMFDFLNVTIHASAKGKVGPGNNSLRPV---------------SQARPSLAGRR----PVFDGASRAGSGXXXXXXXXERKGSAEXXAVGSASAAGNGAAPAKNAADMSRSELRSHVVGAREAEVALAAKVARLEETVERNSERDPRIAAAARQKLEEIRAQGRQVRASRDRAERVLGDRG 235
            MMNRMGYRRGEGLGKEKQGI+RPVPIRVLPERR LDHLRVD           GG  XXX                          MF+FLN T+HAS +                              + PS A       P    A+ AG+             + +    G   A   GAA     A MS++ELRSH+VGAREAE  LAAK+ RL+ET+ RN E DPR AA ARQKL+++  Q ++VR SR RAER L +RG
Sbjct:  376 MMNRMGYRRGEGLGKEKQGISRPVPIRVLPERRTLDHLRVDDVGGGKSARSVGGDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMFNFLNKTMHASMRKXXXXXXXXXXXXXXXXXXXXRLLFDAGGDSYPSCASSSSTSIPTATTATGAGTAHPLRKSGVLSDTNRDGGGAGVGRAGVGGAA-----ARMSQAELRSHLVGAREAEATLAAKIGRLKETISRNEELDPRTAAQARQKLKQVCQQAKEVRDSRGRAERALENRG 635          
BLAST of mRNA_S-dermatodea_contig8037.16222.1 vs. uniprot
Match: A0A397GHW4_9GLOM (G-patch domain-containing protein n=1 Tax=Diversispora epigaea TaxID=1348612 RepID=A0A397GHW4_9GLOM)

HSP 1 Score: 56.6 bits (135), Expect = 1.340e-5
Identity = 34/114 (29.82%), Postives = 52/114 (45.61%), Query Frame = 0
Query:    1 MMNRMGYRRGEGLGKEKQGIARPVPIRVLPERRALDHLRVDG---GXXXXXPGAGARKHKSKPGAAS---------------SLDTHEPQKAMFDFLNVTIHASAKGKVGPGNN 96
            MM +MGY+ GEGLGK  +GI +P+ +++  +  +LD++             P +     K K G  S               S+D  E Q  +FDFLN T++   K +    NN
Sbjct:  343 MMKKMGYKMGEGLGKNSEGIVKPIEVKIFSQGVSLDYINEKDKPKSKKRKPPKSRDSHKKGKKGLTSQRPHKRTKFRQPFSNSVDDIESQSDVFDFLNATLNKGKKSETQNVNN 456          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig8037.16222.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LBV1_ECTSI3.270e-4142.32G-patch domain-containing protein n=1 Tax=Ectocarp... [more]
A0A6H5KPC0_9PHAE1.180e-3542.64Zinc finger CCCH-type with G patch domain-containi... [more]
A0A397GHW4_9GLOM1.340e-529.82G-patch domain-containing protein n=1 Tax=Diversis... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000467G-patch domainSMARTSM00443G-patch_5coord: 1..38
e-value: 0.0092
score: 25.2
IPR000467G-patch domainPFAMPF01585G-patchcoord: 1..36
e-value: 2.1E-9
score: 37.1
IPR000467G-patch domainPROSITEPS50174G_PATCHcoord: 1..40
score: 12.168
NoneNo IPR availablePANTHERPTHR46297FAMILY NOT NAMEDcoord: 1..229

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig8037contigS-dermatodea_contig8037:7571..8803 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig8037.16222.1mRNA_S-dermatodea_contig8037.16222.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig8037 7472..9395 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig8037.16222.1 ID=prot_S-dermatodea_contig8037.16222.1|Name=mRNA_S-dermatodea_contig8037.16222.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=251bp
MMNRMGYRRGEGLGKEKQGIARPVPIRVLPERRALDHLRVDGGGGGGAPG
AGARKHKSKPGAASSLDTHEPQKAMFDFLNVTIHASAKGKVGPGNNSLRP
VSQARPSLAGRRPVFDGASRAGSGGGGGGGGGERKGSAEGGAVGSASAAG
NGAAPAKNAADMSRSELRSHVVGAREAEVALAAKVARLEETVERNSERDP
RIAAAARQKLEEIRAQGRQVRASRDRAERVLGDRGSSKGKGGGKGGLFSF
*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000467G_patch_dom