prot_S-dermatodea_contig8035.16220.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig8035.16220.1
Unique Nameprot_S-dermatodea_contig8035.16220.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length650
Homology
BLAST of mRNA_S-dermatodea_contig8035.16220.1 vs. uniprot
Match: D8LUB2_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LUB2_ECTSI)

HSP 1 Score: 149 bits (375), Expect = 8.590e-34
Identity = 182/504 (36.11%), Postives = 229/504 (45.44%), Query Frame = 0
Query:   92 SAGLAGASLLQLASAAVGDFAAP-------RAAQTPPER-------TWPKDKLSKDSWDPAPASNATPEDEHDGLRPGTEDFGADPPRRRASYAAPSLSSEALSLNAALETSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVPLPL-PSLESLLENAPRSHLKRQRD-GIA--EPYDMDVDQQPXXXXXXXXXXXXPAALEGGGLARPVFRGDEMPGVTENGGDDGAGKTPHQGADCDGSRDTSSSSGAAASGQHRPFAGAKRLFSGPGG------------GQRWGAGEQVWKNTSAP---TTGYVTSRLKPDWRSPGLASVGRAASFDEAREATDRQGLGAGNDGKPRRASAFVTHGSALSPVVTEMGRRDSAIEPRKAPV---RRHHFHDLLSAQTPFRSVTAYGAGAGIDRSRSLAHIPGNPDARIEEGREMDLHDRQAPASGGIPSWNAPAGGEWIPSGSGARGAGAQDSRPSGLTSNLSRKTQFHVMPATAAY 559
            S GLAGASLLQLA  A    ++P        AA +PP          W      +    PA A    P      ++       A+P  RRAS+ AP+++     +   L+T                                  ++P PL PS++SLL++ P   LKRQRD G A  +PYD       XXXXXXXXXXXXP   +  G ARP   G     V+ +  +   G+   +G   +  RD SS +   AS Q R       LFSGP              G+R     +VW    +P   TTGYVTS    +WR  G+A++GRAASFDEAR A  + G+ + +  KPRRASAFVTHGSAL P V EM RRDSA E R  P    R  H+ DLLSA    RSVTA+    G   S +LAH    PDA IEE         +A A            G   PSG G         RP  +  + +    FHVMPATA +
Sbjct:  146 SVGLAGASLLQLAGGAESSASSPAPTGTGQNAANSPPPEGATAGGGPWISGNQMRGGGLPAGADEQQPPAS---VQQKHAPAAAEPRTRRASFNAPAVAPIIQPVLPDLKTQHTRRS----------------------------SMPAPLLPSVQSLLDDIPHGGLKRQRDEGRARQQPYDTXXXXXXXXXXXXXXXXXXPPE-DAAGFARP---GPAHVAVSGSAAEKRGGR---EGRVDESGRDASSVAADGASAQARTPKKTTSLFSGPAXXXXXXXXXXXXDGER-ATRRKVWNPHQSPPSSTTGYVTSSPAMNWRRDGVATLGRAASFDEARLAERKSGMQSEDSSKPRRASAFVTHGSALPPRVIEMHRRDSAYETRTVPAGAGRVAHYSDLLSANASSRSVTAFNGRPGYSPSLTLAH----PDAVIEE---------EAVAGAAAAGQREDGAGAGAPSGGG---------RPP-MPGSRAAARMFHVMPATAVF 587          
BLAST of mRNA_S-dermatodea_contig8035.16220.1 vs. uniprot
Match: A0A6H5JV53_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV53_9PHAE)

HSP 1 Score: 145 bits (365), Expect = 2.000e-32
Identity = 149/357 (41.74%), Postives = 176/357 (49.30%), Query Frame = 0
Query:  228 LPSLESLLENAPRSHLKRQR-DGIA--EPYDMDVDQQPXXXXXXXXXXXXPAALEGGGLARP--VFRGDEMPGVTENGGDDGAGKTPHQGADCDGSRDTSSSSGAAASGQHRPFAGAKRLFSGPGG--------------GQRWGAGEQVWKNTSAP---TTGYVTSRLKPDWRSPGLASVGRAASFDEAREATDRQGLGAGNDGKPRRASAFVTHGSALSPVVTEMGRRDSAIEPRKAPV---RRHHFHDLLSAQTPFRSVTAYGAGAGIDRSRSLAHIPGNPDARIEEGREMDLHDRQAPASGGIPSWNAPAGGEWIPSGSGARGAGAQDSRPSGLTSNLSRKTQFHVMPATAAY 559
            LPS++SLL++ PR  LKRQR +G A  +PYD D D    XXXXXXXXXX P   +  G ARP         PG  + GG +G       G D  G RD SS +   AS Q R       LFSGP                G+R     +VW    +P   TTGYVTS    +WR  G+A++GR ASFDEAR    + G+ + +  KPRRASAFV HGSAL P V EM RRDSA E R  P    R  H+ DLLSA    RSVTA+    G   S  LA     PDA IEE  E       A  S       AP+GG                 RP    S L+ +  FHVMPATA +
Sbjct:  292 LPSVQSLLDDIPRGGLKRQRNEGRARQQPYDTDADSATSXXXXXXXXXXGPPE-DTAGFARPGPAHVAASGPGAEKGGGREG-------GVDESG-RDPSSVAADGASAQARTPNKTSSLFSGPVAAXXXXXXXXXQQQDGER-ATRRKVWNPHQSPPSITTGYVTSSPAMNWRRDGVATLGRVASFDEARMVAIKSGMQSEDSSKPRRASAFVAHGSALPPRVIEMHRRDSAYETRTVPGGAGREPHYSDLLSANASSRSVTAFNGCPGYSPSLMLAQ----PDAVIEE--EAAAGXXXAGQSEDGVGAGAPSGGR----------------RPPVPGSRLAAR-MFHVMPATAVF 615          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig8035.16220.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LUB2_ECTSI8.590e-3436.11EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
A0A6H5JV53_9PHAE2.000e-3241.74Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig8035contigS-dermatodea_contig8035:6614..9128 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig8035.16220.1mRNA_S-dermatodea_contig8035.16220.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig8035 6614..9128 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig8035.16220.1 ID=prot_S-dermatodea_contig8035.16220.1|Name=mRNA_S-dermatodea_contig8035.16220.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=650bp
PLIASQGQRSQFCSAHKQEGQVDVCNRRCQHPGCSKRPCFGLRGQRPCFC
GSHRTPQMVDVISHKCGYPGCSHPTGYEANRVRSKFCEKHKSAGLAGASL
LQLASAAVGDFAAPRAAQTPPERTWPKDKLSKDSWDPAPASNATPEDEHD
GLRPGTEDFGADPPRRRASYAAPSLSSEALSLNAALETSSPRRRASYAAP
SVSGPGSPLTKAVLAAVPQRRSTVPLPLPSLESLLENAPRSHLKRQRDGI
AEPYDMDVDQQPPPPSSTSALAAAPAALEGGGLARPVFRGDEMPGVTENG
GDDGAGKTPHQGADCDGSRDTSSSSGAAASGQHRPFAGAKRLFSGPGGGQ
RWGAGEQVWKNTSAPTTGYVTSRLKPDWRSPGLASVGRAASFDEAREATD
RQGLGAGNDGKPRRASAFVTHGSALSPVVTEMGRRDSAIEPRKAPVRRHH
FHDLLSAQTPFRSVTAYGAGAGIDRSRSLAHIPGNPDARIEEGREMDLHD
RQAPASGGIPSWNAPAGGEWIPSGSGARGAGAQDSRPSGLTSNLSRKTQF
HVMPATAAYLTLGSQPPQDESSSAGVGASAGAESDAPAAGDQQQRRWSVR
DTAPVLSDQDSRQFVPAWGASMEEAKAAEEDGGARDNVGAAVGSGMGPSR
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