prot_S-dermatodea_contig80342.16218.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig80342.16218.1
Unique Nameprot_S-dermatodea_contig80342.16218.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length43
Homology
BLAST of mRNA_S-dermatodea_contig80342.16218.1 vs. uniprot
Match: D7FT61_ECTSI (CULLIN_2 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FT61_ECTSI)

HSP 1 Score: 82.4 bits (202), Expect = 2.980e-17
Identity = 40/42 (95.24%), Postives = 42/42 (100.00%), Query Frame = 0
Query:    1 MLEKVIVIFRYLQDKDVFENFYKTHLSKRLLGGRSVSDEVKK 42
            MLEKVIVIFRYLQDKDVFENFYKTHLSKRLLGGRSVSDE++K
Sbjct:  404 MLEKVIVIFRYLQDKDVFENFYKTHLSKRLLGGRSVSDEMEK 445          
BLAST of mRNA_S-dermatodea_contig80342.16218.1 vs. uniprot
Match: A0A7S2BUF6_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BUF6_9STRA)

HSP 1 Score: 71.2 bits (173), Expect = 2.530e-13
Identity = 32/43 (74.42%), Postives = 40/43 (93.02%), Query Frame = 0
Query:    1 MLEKVIVIFRYLQDKDVFENFYKTHLSKRLLGGRSVSDEVKKT 43
            +LEKVIVIFRYLQDKD+FENFYK HL+KRLL GRSVS++ +++
Sbjct:  297 LLEKVIVIFRYLQDKDIFENFYKQHLAKRLLSGRSVSEDAERS 339          
BLAST of mRNA_S-dermatodea_contig80342.16218.1 vs. uniprot
Match: A0A7S2W0A7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W0A7_9STRA)

HSP 1 Score: 69.7 bits (169), Expect = 8.820e-13
Identity = 32/42 (76.19%), Postives = 39/42 (92.86%), Query Frame = 0
Query:    2 LEKVIVIFRYLQDKDVFENFYKTHLSKRLLGGRSVSDEVKKT 43
            LEKVIVIFRYLQDKD+FENFYK HL+KRLL GRSVS++ +++
Sbjct:  404 LEKVIVIFRYLQDKDIFENFYKQHLAKRLLQGRSVSEDAERS 445          
BLAST of mRNA_S-dermatodea_contig80342.16218.1 vs. uniprot
Match: A0A7S1YM27_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1YM27_9STRA)

HSP 1 Score: 69.3 bits (168), Expect = 1.200e-12
Identity = 31/41 (75.61%), Postives = 37/41 (90.24%), Query Frame = 0
Query:    2 LEKVIVIFRYLQDKDVFENFYKTHLSKRLLGGRSVSDEVKK 42
            L+KVI +FRYL DKDVFENFYK HL+KRLLGGRSVSD+ ++
Sbjct:  410 LQKVITVFRYLSDKDVFENFYKQHLAKRLLGGRSVSDDAER 450          
BLAST of mRNA_S-dermatodea_contig80342.16218.1 vs. uniprot
Match: R1EPB6_EMIHU (CULLIN_2 domain-containing protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1EPB6_EMIHU)

HSP 1 Score: 69.3 bits (168), Expect = 1.210e-12
Identity = 29/43 (67.44%), Postives = 41/43 (95.35%), Query Frame = 0
Query:    1 MLEKVIVIFRYLQDKDVFENFYKTHLSKRLLGGRSVSDEVKKT 43
            ML+KV+++FRYLQ+KDVFE +YK HL+KRLLGGRS+SD+V+++
Sbjct:  405 MLDKVVMLFRYLQEKDVFEKYYKQHLAKRLLGGRSISDDVERS 447          
BLAST of mRNA_S-dermatodea_contig80342.16218.1 vs. uniprot
Match: A0A813LE58_POLGL (Hypothetical protein (Fragment) n=2 Tax=Polarella glacialis TaxID=89957 RepID=A0A813LE58_POLGL)

HSP 1 Score: 67.4 bits (163), Expect = 2.130e-12
Identity = 30/42 (71.43%), Postives = 38/42 (90.48%), Query Frame = 0
Query:    2 LEKVIVIFRYLQDKDVFENFYKTHLSKRLLGGRSVSDEVKKT 43
            LE+V+ +FR+LQDKDVFENFYK HL++RLL GRSVSDE +K+
Sbjct:  144 LEQVVTVFRFLQDKDVFENFYKQHLARRLLTGRSVSDEAEKS 185          
BLAST of mRNA_S-dermatodea_contig80342.16218.1 vs. uniprot
Match: A0A4D9CTV1_9STRA (CULLIN_2 domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CTV1_9STRA)

HSP 1 Score: 68.6 bits (166), Expect = 2.250e-12
Identity = 32/41 (78.05%), Postives = 37/41 (90.24%), Query Frame = 0
Query:    2 LEKVIVIFRYLQDKDVFENFYKTHLSKRLLGGRSVSDEVKK 42
            L K IVIF++LQDKDVFEN+YK HLSKRLLGGRSV+DE +K
Sbjct:  387 LSKFIVIFKFLQDKDVFENYYKQHLSKRLLGGRSVNDEFEK 427          
BLAST of mRNA_S-dermatodea_contig80342.16218.1 vs. uniprot
Match: A0A7S1FCU5_NOCSC (Hypothetical protein n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S1FCU5_NOCSC)

HSP 1 Score: 67.8 bits (164), Expect = 4.200e-12
Identity = 30/42 (71.43%), Postives = 39/42 (92.86%), Query Frame = 0
Query:    2 LEKVIVIFRYLQDKDVFENFYKTHLSKRLLGGRSVSDEVKKT 43
            LE+V+++FR+LQDKDVFENFYK HLS+RLL GRSV+DE +K+
Sbjct:  387 LEQVVMVFRFLQDKDVFENFYKQHLSRRLLTGRSVNDEAEKS 428          
BLAST of mRNA_S-dermatodea_contig80342.16218.1 vs. uniprot
Match: A0A7S4J4U9_9EUKA (Hypothetical protein n=2 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A7S4J4U9_9EUKA)

HSP 1 Score: 67.8 bits (164), Expect = 4.210e-12
Identity = 29/43 (67.44%), Postives = 40/43 (93.02%), Query Frame = 0
Query:    1 MLEKVIVIFRYLQDKDVFENFYKTHLSKRLLGGRSVSDEVKKT 43
            +LEKV+++FRYLQ+KDVFE +YK HL+KRLLGGRSVSD+ +++
Sbjct:  294 VLEKVVMLFRYLQEKDVFEKYYKQHLAKRLLGGRSVSDDAERS 336          
BLAST of mRNA_S-dermatodea_contig80342.16218.1 vs. uniprot
Match: A0A813E896_POLGL (Hypothetical protein (Fragment) n=3 Tax=Polarella glacialis TaxID=89957 RepID=A0A813E896_POLGL)

HSP 1 Score: 67.4 bits (163), Expect = 5.700e-12
Identity = 30/42 (71.43%), Postives = 38/42 (90.48%), Query Frame = 0
Query:    2 LEKVIVIFRYLQDKDVFENFYKTHLSKRLLGGRSVSDEVKKT 43
            LE+V+ +FR+LQDKDVFENFYK HL++RLL GRSVSDE +K+
Sbjct:   62 LEQVVTVFRFLQDKDVFENFYKQHLARRLLTGRSVSDEAEKS 103          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig80342.16218.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FT61_ECTSI2.980e-1795.24CULLIN_2 domain-containing protein n=2 Tax=Ectocar... [more]
A0A7S2BUF6_9STRA2.530e-1374.42Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S2W0A7_9STRA8.820e-1376.19Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S1YM27_9STRA1.200e-1275.61Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
R1EPB6_EMIHU1.210e-1267.44CULLIN_2 domain-containing protein n=2 Tax=Emilian... [more]
A0A813LE58_POLGL2.130e-1271.43Hypothetical protein (Fragment) n=2 Tax=Polarella ... [more]
A0A4D9CTV1_9STRA2.250e-1278.05CULLIN_2 domain-containing protein n=2 Tax=Monodop... [more]
A0A7S1FCU5_NOCSC4.200e-1271.43Hypothetical protein n=1 Tax=Noctiluca scintillans... [more]
A0A7S4J4U9_9EUKA4.210e-1267.44Hypothetical protein n=2 Tax=Prymnesium polylepis ... [more]
A0A813E896_POLGL5.700e-1271.43Hypothetical protein (Fragment) n=3 Tax=Polarella ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.20.1310.10coord: 1..43
e-value: 2.2E-15
score: 58.7
NoneNo IPR availablePANTHERPTHR11932CULLINcoord: 1..42
IPR001373Cullin, N-terminalPFAMPF00888Cullincoord: 2..41
e-value: 1.1E-16
score: 60.6
IPR016158Cullin homology domainPROSITEPS50069CULLIN_2coord: 1..43
score: 13.736
IPR036317Cullin homology domain superfamilySUPERFAMILY75632Cullin homology domaincoord: 2..42

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig80342contigS-dermatodea_contig80342:453..581 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig80342.16218.1mRNA_S-dermatodea_contig80342.16218.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig80342 441..581 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig80342.16218.1 ID=prot_S-dermatodea_contig80342.16218.1|Name=mRNA_S-dermatodea_contig80342.16218.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=43bp
MLEKVIVIFRYLQDKDVFENFYKTHLSKRLLGGRSVSDEVKKT
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001373Cullin_N
IPR016158Cullin_homology
IPR036317Cullin_homology_sf