prot_S-dermatodea_contig8033.16217.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig8033.16217.1
Unique Nameprot_S-dermatodea_contig8033.16217.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length701
Homology
BLAST of mRNA_S-dermatodea_contig8033.16217.1 vs. uniprot
Match: D7FHX5_ECTSI (WW domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHX5_ECTSI)

HSP 1 Score: 224 bits (572), Expect = 2.100e-59
Identity = 246/836 (29.43%), Postives = 332/836 (39.71%), Query Frame = 0
Query:    1 MHTAAGTGAIESIELLISAGLSPKTKDIGGRTPLHHAA---ANGSAKCTSFLCAVARSTALSRDRVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAL---GDDAVLWALRGGAGWQCHGTTSTRCVGQRYGGGR----PRSGLDGGVNIERIMAVWERFFENAAMACLGPE---PVVVNIDRDSDGRDRRASPIETIEMDTEGGVESYPEP------------QENCRTAHAGVVKTSR-----EAEGRRGDRGSDGHGS----RVDNECLEKGENIEVPHLEKKTNGLTIHCGAWGL--------GSFDHLLNETAGGDRPRPEPAAWTDVTSVEQCGGYDTPL----------------SDNLSIFGIPESINGYSDWAHSDVVFPPEGEESDATSTPTGLPSGE--AWMACWDGASEAVYYWNFSSGDVSWDAP---NICDGGGDLQ---RRVWDPRQEAFFTFDESGDSHWILDN---------FVER---TDSAGNDAGVAV----------------------SAIAVGEGKAG-SQVYVPCPPQEHAVRSSPSDCDDYLYAAGGEGSLSCGGKPSTNRWGTGELYPMQHTAARVEPSAEAQQSHDEVSGFFNAQER----------SMKG--------PFWAEARTSEHELNATNAEAEEP--RESPEAAAGRNVEETL--------DGLDFFDARACQDEQLESHNTRNVGWDQASATDGASIPGTESALAP--------LPAWVLWCPQA------SETLSYFVDQETGESSWVLPPAVVVPSKGWLRAWSEEHGTWFYANHWTGTVTWEL 693
            MHTAAG GA+ESIELL+SAGLSP+T+D  GRTPLHHA     +G+A+C SFLC VA ST LSRDR A                                            A    GDD ++ AL  G           R    R  GG+     R+   G V+ +RIMAVWERFFENAA A LG +   P V++    + GR       + +  D   GV    E             Q   R  H   V TS        E + GDR     G       D+             L   ++  T    A G         G  +H+  + A    P     A  D+      G   T L                 D +    +PE I+G  D +  +   P   + + A       P     AW+ACWD ASE++YYW+ +SG++SW+AP      + G  L      VWDP++EAFFT D+ G SHW++D+          VE    TD A  D    V                        +A+G      S   V       A+ ++ +  D+ L     +G     G P +      +           E S +    +D++ GFF+AQE           S  G        P   +AR     L+  + E ++   R +  A    + + T         DG D FD         +SH  ++   +   A +G +    ESA+A         LP WV WC  +      +    YFV++ETGESSWVLPP  V  S+GWLRAWSEEH   F+AN WTG VTW+L
Sbjct:    1 MHTAAGVGAVESIELLLSAGLSPRTRDHSGRTPLHHACLFPGSGAARCVSFLCVVAGSTVLSRDRTAGDTPLHFAVRARHGVCVEVLLSFAEGTSDILREANAKGETPLDLAAALSGDDGIVLALLDG---------DRRRHQPRSNGGKLSYLGRNVEGGTVDFQRIMAVWERFFENAARADLGGKKSSPDVISA-VGTVGRGGYGGVEQLVNTDETRGVGKLAEDGRWLGRGQPRATQTFDRDRH--FVTTSELGGGGVGESQTGDRNGRWDGGWCVDTADSRTFRSRRTWRPSGLADTSSIATAQDLARGTPPQHLERDGEDEHV--DVAPLQSPHRRQGAKEDLGVQVGVGESGTTLLSSDDADLHLFHTPRGGDGVEAVRLPERIHGNID-STLEPSTPASKDTNAAAEAAADNPYRRHGAWIACWDAASESIYYWDSNSGELSWNAPAPSTAIERGERLNGFPSPVWDPQREAFFTIDKDGASHWLVDSPSSPTWTTPVVEHRAATDGADGDIASLVVQDYTYDRTSASEESTTFSSWQQGLAIGAAAPEWSSSEVERDRDRDALNNTVNQVDEVLAW---DGQQLLAGLPYSFPMLDRQAVQQLPNTCGDEYSKDDINGNDDLHGFFDAQEEHATRRSAPSFSQAGAGQECAVEPIDGDARADGRVLHLASGEEQQRCLRANAAAVVSESTQNTTTAGKGNQPDGNDVFDTEEQPSYLRDSH--QDTDQNGLGAVEGGTRSHDESAVAEAYDPALTRLPLWVQWCSYSPHDGDDTNNQPYFVNEETGESSWVLPPDAVAESRGWLRAWSEEHQAHFFANQWTGNVTWDL 816          
BLAST of mRNA_S-dermatodea_contig8033.16217.1 vs. uniprot
Match: A0A6H5KHS3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHS3_9PHAE)

HSP 1 Score: 207 bits (526), Expect = 4.350e-53
Identity = 249/838 (29.71%), Postives = 335/838 (39.98%), Query Frame = 0
Query:    1 MHTAAGTGAIESIELLISAGLSPKTKDIGGRTPLHHAA---ANGSAKCTSFLCAVARSTALSRDRVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAL---GDDAVLWALRGGAGWQCHGTTSTRCVGQRYGGGRPRSG--LDGG-VNIERIMAVWERFFENAAMACLG-----PEPV----------------VVNIDRD-------SDGR-------------DRRASPIETIEMDTEGGVESYPEPQENCRTAHAGVVKTSREAEGRRGDRGSDGHGSRVDNECLEKGENIEVPHLEKKTNGLTIHCGAWGLGSFDHLLNETAGGDRPRPEPAAWTDVTSVEQCGG----YDTPLS-DNLSIFGIPESINGYSDWAHSDVVFPPEGEESDATSTPTGLPSGE--AWMACWDGASEAVYYWNFSSGDVSWDAPN---ICDGGGDLQ---RRVWDPRQEAFFTFDESGDSHWILDNFVERTDSAGNDAGVAVSAIAVGEGKAGSQVYVPCPPQEHAVRSSPSDCDDYLYAAGGEGSLSCGGKP---STNRWGTGELYPMQHTAARVE--PSAEAQQ-----SH-----------------------DEVSG------FFNAQER----------SMKG--------PFWAEARTSEHELNATNAEAEEP--RESPEAAAGRNVEETL--------DGLDFFDARACQDEQLESHNTRNVGWDQ--ASATDGAS--------IPGTESALAPLPAWVLWCPQASE-----TLSYFVDQETGESSWVLPPAVVVPSKGWLRAWSEEHGTWFYANHWTGTVTWEL 693
            MHTAAG GA+ESIELL+SAGLSP+T+D  GRTPLHHA     + +A+C SFLCAVA ST LSRDR A                                            A    GDD +L AL    G         R   +  GG     G  ++G  V+ +RIMAVWERFFENAA A LG     P+ +                +VN D          DGR             DR  S + T E+   GG ES    + N R      V T+     R     S    S      L +G   +  HLE+  +G   H     L     +  +    D         +  T +         + TP   D +    +PE I+G  D +  +   PP    + A       P      W+ACWD ASE+VYYW+ +SG++SW+AP      + G  L      +WDP++EAFFT DE G SHW++      T +        V   A  +G  G    +    QE+    +    +   Y +  +GS      P   S+      +   +  TA +VE  P+ + QQ     SH                       D+V+G      FF+AQE           S  G        P   +A      ++  +   ++   R +  A      + T         DG+D  D     DEQ  S    +   DQ    A +G +        +   + A+  LP WV WC  +        LSYFV++ETGESSWVLPP  V  S+GWL AWSEEH   F+AN WTG VTW+L
Sbjct:   37 MHTAAGVGAVESIELLLSAGLSPRTRDHSGRTPLHHACLFPGSAAARCVSFLCAVAGSTVLSRDRTAGDTPLHFAVRARQGVCVEVLLSFAAGTNDILREANANGETPLDLAAALSGDDVILLALLEADG--------RRRQPRSNGGNLSYLGRNVEGDTVDFQRIMAVWERFFENAARADLGRKKSSPDVISAVGTVGRGEYGGVEQLVNTDETRAAGKLAKDGRWLGRGQPRATQTLDRDISFVTTSELGGGGGGESQSGDR-NGRWDGGWCVDTADSRNLR-----SRSTSSVATARDLARGPPPQ--HLER--DGEDAHVDVAPLLPVGPMRRQGVKDDLSVQVGVGESGTTLLSSDDADLHLFHTPRGGDGVEAVRLPERIHGNID-STLEPSTPPIKATNAAAEAAADNPYRRHGTWIACWDAASESVYYWDSNSGELSWNAPGPSTAIERGNRLNGIPSPLWDPQREAFFTIDEDGASHWLVGYPSSPTWTT-----PVVEHRAAMDGADGDTASLV---QEYNPDRTTVSKESTTYTSWQQGSAVAAAAPEPSSSEVECDRDRGILGTTANQVEEDPAWDRQQPLAGFSHSLRMVDRQSIQTLPNTCGEKYTEDDVNGNDDLHEFFDAQEEHAARCSTPSSSHAGAGQECAVEPIDGDAGADNRVVHLASGPEQQRCLRANAAAVVSEYTQNTTTAGKGNQSDGIDLSDT----DEQPSSGRDSHQDTDQNGLGAVEGGTRFHDESSVVEADDLAMIRLPLWVQWCSYSPHDDDDTNLSYFVNEETGESSWVLPPDAVAESRGWLLAWSEEHQAHFFANQWTGNVTWDL 843          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig8033.16217.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FHX5_ECTSI2.100e-5929.43WW domain-containing protein n=1 Tax=Ectocarpus si... [more]
A0A6H5KHS3_9PHAE4.350e-5329.71Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001202WW domainSMARTSM00456ww_5coord: 663..696
e-value: 1.9
score: 14.0
coord: 629..660
e-value: 2.6
score: 12.9
coord: 362..395
e-value: 0.49
score: 19.2
IPR001202WW domainPROSITEPS01159WW_DOMAIN_1coord: 634..658
IPR001202WW domainPROSITEPS50020WW_DOMAIN_2coord: 361..395
score: 8.591
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 64..94
e-value: 0.22
score: 20.6
coord: 29..58
e-value: 1.5
score: 17.9
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 64..87
score: 8.656
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 1..28
score: 8.603
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 1..121
e-value: 2.2E-21
score: 78.1
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 2..119
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 1..89
e-value: 5.3E-12
score: 46.2
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 1..119
score: 22.914
NoneNo IPR availablePANTHERPTHR24178FAMILY NOT NAMEDcoord: 2..115

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig8033contigS-dermatodea_contig8033:2357..4729 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig8033.16217.1mRNA_S-dermatodea_contig8033.16217.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig8033 2357..4729 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig8033.16217.1 ID=prot_S-dermatodea_contig8033.16217.1|Name=mRNA_S-dermatodea_contig8033.16217.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=701bp
MHTAAGTGAIESIELLISAGLSPKTKDIGGRTPLHHAAANGSAKCTSFLC
AVARSTALSRDRVAGDTPLHLAVAARHTLCIQVLLSHTGGSIAHEANARG
DTPLDMARALGDDAVLWALRGGAGWQCHGTTSTRCVGQRYGGGRPRSGLD
GGVNIERIMAVWERFFENAAMACLGPEPVVVNIDRDSDGRDRRASPIETI
EMDTEGGVESYPEPQENCRTAHAGVVKTSREAEGRRGDRGSDGHGSRVDN
ECLEKGENIEVPHLEKKTNGLTIHCGAWGLGSFDHLLNETAGGDRPRPEP
AAWTDVTSVEQCGGYDTPLSDNLSIFGIPESINGYSDWAHSDVVFPPEGE
ESDATSTPTGLPSGEAWMACWDGASEAVYYWNFSSGDVSWDAPNICDGGG
DLQRRVWDPRQEAFFTFDESGDSHWILDNFVERTDSAGNDAGVAVSAIAV
GEGKAGSQVYVPCPPQEHAVRSSPSDCDDYLYAAGGEGSLSCGGKPSTNR
WGTGELYPMQHTAARVEPSAEAQQSHDEVSGFFNAQERSMKGPFWAEART
SEHELNATNAEAEEPRESPEAAAGRNVEETLDGLDFFDARACQDEQLESH
NTRNVGWDQASATDGASIPGTESALAPLPAWVLWCPQASETLSYFVDQET
GESSWVLPPAVVVPSKGWLRAWSEEHGTWFYANHWTGTVTWELNDADLIE
*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001202WW_dom
IPR002110Ankyrin_rpt
IPR036770Ankyrin_rpt-contain_sf
IPR020683Ankyrin_rpt-contain_dom