mRNA_S-dermatodea_contig8029.16212.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig8029.16212.1
Unique NamemRNA_S-dermatodea_contig8029.16212.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
[Close]
BLAST of mRNA_S-dermatodea_contig8029.16212.1 vs. uniprot
Match: D7FLB9_ECTSI (Isocitrate lyase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FLB9_ECTSI)

HSP 1 Score: 642 bits (1656), Expect = 1.110e-226
Identity = 317/372 (85.22%), Postives = 335/372 (90.05%), Query Frame = 1 
Query:  172 PASMYGQQLFGHGTESRDASSHAKMFNRDVEAAKRWWGSPRFRFTNRPFSAEEVVSLRGTLPETYPSNIQARKLWDLLEKKHGHGDFSHTFGALDPVQVIEMAPHLETVYVSGWQCSSTASTSNEPGPDFADYPYDTVPNKVDQLFRAQRLHDRRQNDERCAMSEHEREAFPPTDYLRPIIADGDTGHGGLTAVMKLTKMFIEKGAAGIHFEDQKPGTKKCGHMGGKVLVSMQEHCDRLIAARLQADIMGTETVIVARTDAEAASLLDNNVDRRDHPFILGTTVPGTRPLNDLIREAQGRGASFEEINALSKTWIENACLMRFPEAVEAAIHATPGLPGRDQRLKEWQSKAYTLGHACARELSVKLLDGKQV 1287
            PASMYGQQLFGH  +S  A   AK FN DVEA KRWWGSPRFR+T RPFSAEEVVSLRGTLPETYPS+IQARKLW+LLEKKH  GDFSHTFGALDPVQVIEMAPHLETVYVSGWQCSSTASTSNEPGPDFADYPYDTVPNKVDQLFRAQR HDRRQNDERC+MSE E+ + P  DYLRPIIADGDTGHGGLTAVMKLTKMFIEKGAAGIHFEDQKPGTKKCGHMGGKVLVSMQEHCDRL+AARLQADIMGTETVIVARTDAEAASLLDNNVD RDHPFI+G TVPGTRPLNDL+REA+  GASFE I+ LSK W E A LMRFPEAVEAAIH+  GL GRDQRL+EW+SKAY+L +A AR LS +LL GKQV
Sbjct:    3 PASMYGQQLFGHNLKSHGAQVQAKTFNHDVEATKRWWGSPRFRYTKRPFSAEEVVSLRGTLPETYPSDIQARKLWELLEKKHALGDFSHTFGALDPVQVIEMAPHLETVYVSGWQCSSTASTSNEPGPDFADYPYDTVPNKVDQLFRAQRHHDRRQNDERCSMSEGEQLSAPAVDYLRPIIADGDTGHGGLTAVMKLTKMFIEKGAAGIHFEDQKPGTKKCGHMGGKVLVSMQEHCDRLVAARLQADIMGTETVIVARTDAEAASLLDNNVDPRDHPFIVGATVPGTRPLNDLVREARAGGASFEAIDKLSKDWGEKAGLMRFPEAVEAAIHSMRGLQGRDQRLQEWKSKAYSLSNAEARVLSARLLGGKQV 374
[Close]
BLAST of mRNA_S-dermatodea_contig8029.16212.1 vs. uniprot
Match: A0A835YPK9_9STRA (Isocitrate lyase n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPK9_9STRA)

HSP 1 Score: 491 bits (1263), Expect = 1.460e-167
Identity = 242/345 (70.14%), Postives = 278/345 (80.58%), Query Frame = 1 
Query:  247 FNRDVEAAKRWWGSPRFRFTNRPFSAEEVVSLRGTLPETYPSNIQARKLWDLLEKKHGHGDFSHTFGALDPVQVIEMAPHLETVYVSGWQCSSTASTSNEPGPDFADYPYDTVPNKVDQLFRAQRLHDRRQNDERCAMSEHEREAF-PPTDYLRPIIADGDTGHGGLTAVMKLTKMFIEKGAAGIHFEDQKPGTKKCGHMGGKVLVSMQEHCDRLIAARLQADIMGTETVIVARTDAEAASLLDNNVDRRDHPFILGTTVPGTRPLNDLIREAQGRGASFEEINALSKTWIENACLMRFPEAVEAAIHATPGLPGRDQRLKEWQSKAYTLGHACARELSVKLLDG 1278
            F R+V   K+WW  PRFR T RP++AEE V +RGTLPET+ SN+ A+KLW  LE       F+HTFGALDPVQVIEMAPHL+TVYVSGWQCSSTA+++NEPGPDFADYP DTVP KVDQLFRAQR HDRRQ +ER  M+  ER A   P DYLRP++ADGDTGHGGLTAVMKLTKMF+E GAAGIHFEDQKPGTKKCGHMGGKVLVSMQEHCDRL+AARLQADIMGT+TVIVARTDAEAASLLD+N+D RDHPFILG T P  RP+N+++  A   GAS +++N ++K W  +A LMR+PEAV  AI  + GLP    RLK W SKAYTLGH  AR L+ +LL G
Sbjct:   19 FAREVAGVKQWWSGPRFRDTKRPYTAEEAVGMRGTLPETFASNLMAQKLWAELEACRDRKGFTHTFGALDPVQVIEMAPHLKTVYVSGWQCSSTAASNNEPGPDFADYPMDTVPRKVDQLFRAQRHHDRRQREERQRMTPAERAAAGAPVDYLRPMVADGDTGHGGLTAVMKLTKMFVEAGAAGIHFEDQKPGTKKCGHMGGKVLVSMQEHCDRLVAARLQADIMGTDTVIVARTDAEAASLLDSNIDPRDHPFILGATNPNLRPVNEVMSAAAAAGASADKVNDIAKEWTASAGLMRYPEAVARAIECS-GLPDAQTRLKHWASKAYTLGHDQARALAAQLLGG 362
[Close]
BLAST of mRNA_S-dermatodea_contig8029.16212.1 vs. uniprot
Match: W7TRS4_9STRA (Isocitrate lyase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TRS4_9STRA)

HSP 1 Score: 437 bits (1125), Expect = 5.340e-146
Identity = 220/349 (63.04%), Postives = 269/349 (77.08%), Query Frame = 1 
Query:  241 KMFNRDVEAAKRWWGSPRFRFTNRPFSAEEVVSLRGTLPETYPSNIQARKLWDLLEKKHGHGDFSHTFGALDPVQVIEMAPHLETVYVSGWQCSSTASTSNEPGPDFADYPYDTVPNKVDQLFRAQRLHDRRQNDERCAMSEHEREAFPPTDYLRPIIADGDTGHGGLTAVMKLTKMFIEKGAAGIHFEDQKPGTKKCGHMGGKVLVSMQEHCDRLIAARLQADIMGTETVIVARTDAEAASLLDNNVDRRDHPFILGTTVPGTRPLNDLIREAQGRGASFEEINALSKTWIENACLMRFPEAVEAAIHATPGLPGRDQRLKEWQSKAYTLGHACARELSVKLLDGKQV 1287
            ++++ DV A + ++ +PRF  T RP+SA++VV+LR +L     SN QA+KLW LL    G G  S+TFGALDPVQV++MAPH+ T+YVSGWQCSSTASTSNEPGPDFADYP DTVPNKV QLF AQ  HDRRQ + R  M++  + A PP DYLRPIIADGDTGHGGLTAVMKLTKMFIE+GAAGIHFEDQKPGTKKCGHMGGKVLVS+QEH DRL AARLQAD+MG +T+IVARTD EAASLLD N+D RDHPFILG TVPGTR LN+++ EA+ +G +  E++ ++  W   A L RFPEAV  A+     LP    +L  W+++AY L    AR L+ +L+ G++V
Sbjct:   56 RLYHEDVAATEHFFRNPRFAQTVRPYSAQDVVALRSSLLVEPASNRQAQKLWSLLTGLAGQGKCSYTFGALDPVQVVQMAPHVSTIYVSGWQCSSTASTSNEPGPDFADYPMDTVPNKVHQLFSAQLFHDRRQQEARARMTDASKVAEPPVDYLRPIIADGDTGHGGLTAVMKLTKMFIERGAAGIHFEDQKPGTKKCGHMGGKVLVSVQEHIDRLTAARLQADVMGAQTIIVARTDGEAASLLDTNIDARDHPFILGATVPGTRALNEVVAEARAQGVTGAELDRITDQWTAAANLRRFPEAVCDALST---LPNPAPKLAVWKAQAYNLSLPQARALAKELM-GREV 400
[Close]
BLAST of mRNA_S-dermatodea_contig8029.16212.1 vs. uniprot
Match: A0A7R9U2N8_9STRA (Isocitrate lyase n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U2N8_9STRA)

HSP 1 Score: 420 bits (1079), Expect = 1.510e-139
Identity = 203/323 (62.85%), Postives = 246/323 (76.16%), Query Frame = 1 
Query:  247 FNRDVEAAKRWWGSPRFRFTNRPFSAEEVVSLRGTLPETYPSNIQARKLWDLLEKKHGHGDFSHTFGALDPVQVIEMAPHLETVYVSGWQCSSTASTSNEPGPDFADYPYDTVPNKVDQLFRAQRLHDRRQNDERCAMSEHEREAFPPTDYLRPIIADGDTGHGGLTAVMKLTKMFIEKGAAGIHFEDQKPGTKKCGHMGGKVLVSMQEHCDRLIAARLQADIMGTETVIVARTDAEAASLLDNNVDRRDHPFILGTTVPGTRPLNDLIREAQGRGASFEEINALSKTWIENACLMRFPEAVEAAIHATPGLPGRDQRLKEWQ 1215
            ++ +  A +RWW S R++ T RP+SAE VV+LRG++  T P+N+ ARKLW LL +    G +SHTFGALDPVQV+ MAP L ++YVSGWQCSSTAST+NEPGPD A YP DTVPNKVDQLFRAQ  HDR+Q +ER  M+  +R + PP DYL PI+ADGDTGHGG  A+M L KMFIE+GAAG+HFEDQK GTKKCGHMGGKVLV++QEHCDRLIAARLQADIMGTET++VARTDAEAA+LLDNN D RDHPFI+G T PGTRPL +++ EA   GA   E+    + W + A LMRF E +E  +     L  +   L+ WQ
Sbjct:   29 YDAEARAVERWWSSARWQNTRRPYSAEVVVALRGSITPTLPANVTARKLWALLHELAPRGGYSHTFGALDPVQVVSMAPQLSSIYVSGWQCSSTASTNNEPGPDLAAYPMDTVPNKVDQLFRAQLHHDRKQREERSRMTPEQRASQPPVDYLTPIVADGDTGHGGHIALMNLMKMFIERGAAGVHFEDQKAGTKKCGHMGGKVLVAVQEHCDRLIAARLQADIMGTETILVARTDAEAATLLDNNCDPRDHPFIVGATTPGTRPLREVLAEAAAAGADIAEVQ---QRWEDEAQLMRFTELIEREV-----LTRKPAMLQHWQ 343
[Close]
BLAST of mRNA_S-dermatodea_contig8029.16212.1 vs. uniprot
Match: A0A139APG9_GONPJ (Isocitrate lyase n=1 Tax=Gonapodya prolifera (strain JEL478) TaxID=1344416 RepID=A0A139APG9_GONPJ)

HSP 1 Score: 409 bits (1051), Expect = 3.860e-135
Identity = 204/343 (59.48%), Postives = 246/343 (71.72%), Query Frame = 1 
Query:  241 KMFNRDVEAAKRWWGSPRFRFTNRPFSAEEVVSLRGTLPETYPSNIQARKLWDLLEKKHGHGDFSHTFGALDPVQVIEMAPHLETVYVSGWQCSSTASTSNEPGPDFADYPYDTVPNKVDQLFRAQRLHDRRQNDERCAMSEHEREAFPPTDYLRPIIADGDTGHGGLTAVMKLTKMFIEKGAAGIHFEDQKPGTKKCGHMGGKVLVSMQEHCDRLIAARLQADIMGTETVIVARTDAEAASLLDNNVDRRDHPFILGTTVPGTRPLNDLIREAQGRGASFEEINALSKTWIENACLMRFPEAVEAAIHATPGLPGRDQRLKEWQSKAYTLGHACARELSVKL 1269
            K F+ +VEA K+WW S RF+   RP+SAEEVVS RGTLP++YPSN  A+KLW L+ K       SHTFGALD +QV++MA +LETVYVSGWQ SSTASTSNEPGPD ADYP DTVPNKV+QLF AQ  HDR+Q   R  + + ER   P  DYLRPI+AD DTGHGG+TAVMKLTKM +E+GAAGIHFEDQ PGTKKCGHM GKVLV + EH  RL+AARLQ DIMG E +IV RTD+EAA+L+ N +DRRDHPFI+G T    +PL   + EA+  G +   + A+   WI++A L  +P AV  AI A+     +D   KEW  KAY L +  AR L+  L
Sbjct:   56 KAFHDEVEAVKKWWSSERFKNLKRPYSAEEVVSKRGTLPQSYPSNDMAKKLWKLMTKHQAEKTTSHTFGALDTIQVVQMAKYLETVYVSGWQSSSTASTSNEPGPDLADYPMDTVPNKVEQLFFAQLFHDRKQRHARLGVPKEERAKLPFVDYLRPIVADADTGHGGITAVMKLTKMMVERGAAGIHFEDQMPGTKKCGHMAGKVLVPISEHISRLVAARLQFDIMGVENIIVCRTDSEAATLITNTIDRRDHPFIIGCTNAALKPLVVALEEAENGGKTGSALAAVEDEWIKSAGLKTYPNAVLDAIKASSNA-NKDAVAKEWLDKAYDLSNGDARALAKSL 397
[Close]
BLAST of mRNA_S-dermatodea_contig8029.16212.1 vs. uniprot
Match: A0A0G4IIC4_PLABS (Isocitrate lyase n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4IIC4_PLABS)

HSP 1 Score: 404 bits (1039), Expect = 2.560e-133
Identity = 205/348 (58.91%), Postives = 251/348 (72.13%), Query Frame = 1 
Query:  229 SSHAKMFNRDVEAAKRWWGSPRFRFTNRPFSAEEVVSLRGTLPETYPSNIQARKLWDLLEKKHGHGDFSHTFGALDPVQVIEMAPHLETVYVSGWQCSSTASTSNEPGPDFADYPYDTVPNKVDQLFRAQRLHDRRQNDERCAMSEHEREAFPPTDYLRPIIADGDTGHGGLTAVMKLTKMFIEKGAAGIHFEDQKPGTKKCGHMGGKVLVSMQEHCDRLIAARLQADIMGTETVIVARTDAEAASLLDNNVDRRDHPFILGTTVPGTRPLNDLIREAQGRGASFEEINALSKTWIENACLMRFPEAV-EAAIHATPGLPGRDQRLKEWQSKAYTLGHACARELSVKL 1269
            S+    F        +WW SPR++ T RP++ E+V+ LR  +  TY +N+QA+K W L +     G +SHTFGALDPVQV++M+ +L T+YVSGWQCSSTAST+NEPGPD ADYPY TV NKVDQLFRAQ  H RRQ +ER  M+  ER   P  D+LRPIIADGDTGHGGLTAVMKLTK+FIE GAAGIH EDQKPGTKKCGHM GKVLVS+QEH DRL+AARLQADI+G ET+IVARTDAEAA+LLDNNVD RDHPFILG+T P  + LN L++EA  +  S +    +  +W + A +  + EAV EA + A  G     + + EW +K   L HA A+ L+ KL
Sbjct:   34 SAEEYAFQTGAAELVKWWSSPRWKHTVRPYNPEDVIRLRSPVTPTYAANVQAKKAWALFQSLAASGGYSHTFGALDPVQVVQMSKYLTTIYVSGWQCSSTASTTNEPGPDIADYPYTTVANKVDQLFRAQDFHSRRQAEERSWMTREERAKTPAVDFLRPIIADGDTGHGGLTAVMKLTKLFIEAGAAGIHLEDQKPGTKKCGHMAGKVLVSVQEHIDRLVAARLQADILGVETLIVARTDAEAATLLDNNVDPRDHPFILGSTNPKLKGLNILLKEAADQNLSPQAQVDIMMSWDKKANMKTYGEAVKEALVKANKG----KEAIAEWDAKYPNLSHADAQVLAKKL 377
[Close]
BLAST of mRNA_S-dermatodea_contig8029.16212.1 vs. uniprot
Match: A0A0F7S1P4_9BASI (Isocitrate lyase n=15 Tax=Ustilaginales TaxID=5267 RepID=A0A0F7S1P4_9BASI)

HSP 1 Score: 402 bits (1033), Expect = 3.740e-133
Identity = 199/348 (57.18%), Postives = 246/348 (70.69%), Query Frame = 1 
Query:  226 ASSHAKMFNRDVEAAKRWWGSPRFRFTNRPFSAEEVVSLRGTLPETYPSNIQARKLWDLLEKKHGHGDFSHTFGALDPVQVIEMAPHLETVYVSGWQCSSTASTSNEPGPDFADYPYDTVPNKVDQLFRAQRLHDRRQNDERCAMSEHEREAFPPTDYLRPIIADGDTGHGGLTAVMKLTKMFIEKGAAGIHFEDQKPGTKKCGHMGGKVLVSMQEHCDRLIAARLQADIMGTETVIVARTDAEAASLLDNNVDRRDHPFILGTTVPGTRPLNDLIREAQGRGASFEEINALSKTWIENACLMRFPEAVEAAIHATPGLPGRDQRLKEWQSKAYTLGHACARELSVKL 1269
            A    K+F  +VEA K+WW +PRF  T RP++AE+VVS RGTL +TYPS++Q +KLW  LE     G  SHT+GALDPVQV +MA HLETVYVSGWQCSSTAS++NEPGPD ADYPY+TVP KV+ LF AQ  HDR+Q +ER  MS  +R   P  DYLRPI+AD DTGHGGLTAVMKLTK+F+EKGAAGIH EDQ PGTKKCGHM GKVLV +QEH +RL+A RLQ DIMG E ++VARTD+EAA+L+  NVD RDH FILGTT     PL D++  A+  GA   ++ AL   W+  A  +R+ +AV A +         +   KE   ++     A A+ L V++
Sbjct:    2 ADQELKLFQEEVEAVKQWWKNPRFANTTRPYTAEQVVSKRGTLKQTYPSDVQGKKLWKTLEAHAAKGTTSHTYGALDPVQVTQMAKHLETVYVSGWQCSSTASSTNEPGPDLADYPYNTVPLKVEHLFMAQLFHDRKQREERSNMSPEQRAKTPVVDYLRPIVADADTGHGGLTAVMKLTKLFVEKGAAGIHIEDQAPGTKKCGHMAGKVLVPIQEHINRLVAIRLQYDIMGVENLVVARTDSEAATLITTNVDERDHAFILGTTNTSLEPLVDILNRAEAEGADGPKLIALEDEWLSKAQPIRYGDAVAAELEKKGKKAEAEAFRKEVIGQSLLKAKAKAKSLGVEV 349
[Close]
BLAST of mRNA_S-dermatodea_contig8029.16212.1 vs. uniprot
Match: A0A1X2HRL6_SYNRA (Isocitrate lyase n=1 Tax=Syncephalastrum racemosum TaxID=13706 RepID=A0A1X2HRL6_SYNRA)

HSP 1 Score: 400 bits (1029), Expect = 1.550e-132
Identity = 189/302 (62.58%), Postives = 232/302 (76.82%), Query Frame = 1 
Query:  247 FNRDVEAAKRWWGSPRFRFTNRPFSAEEVVSLRGTLPETYPSNIQARKLWDLLEKKHGHGDFSHTFGALDPVQVIEMAPHLETVYVSGWQCSSTASTSNEPGPDFADYPYDTVPNKVDQLFRAQRLHDRRQNDERCAMSEHEREAFPPTDYLRPIIADGDTGHGGLTAVMKLTKMFIEKGAAGIHFEDQKPGTKKCGHMGGKVLVSMQEHCDRLIAARLQADIMGTETVIVARTDAEAASLLDNNVDRRDHPFILGTTVPGTRPLNDLIREAQGRGASFEEINALSKTWIENACLMRFPEAV 1152
            F ++VE  K+WW SPRF+   RP++AE++VS RGT+P  Y SN QA+KLWD+L++    G+ SHTFGALDPVQ+ +MAPHL+TVYVSGWQCSSTASTSNEPGPD ADYP DTVPNKV+ LF AQ  HDR+Q + R AM+  ER   P  DYLRP+IAD DTGHGG+TAVMKLTKMF+E+GAAGIH EDQ P TKKCGHM GKVLV + EH +RL+A R+Q DIMG E V+VARTDAEAA+L+ +NVD RDH F++G T P  +PL  ++ EA+ RG +  E+ A+   WI  A L +F  AV
Sbjct:   11 FQQEVEQVKQWWQSPRFKLVKRPYTAEQIVSKRGTMPTEYRSNAQAKKLWDILQRNKATGNTSHTFGALDPVQITQMAPHLDTVYVSGWQCSSTASTSNEPGPDLADYPMDTVPNKVEHLFFAQLFHDRKQREARLAMTPQERAKTPKIDYLRPMIADADTGHGGITAVMKLTKMFVERGAAGIHVEDQSPATKKCGHMAGKVLVPVGEHINRLVAIRVQYDIMGVENVVVARTDAEAATLITSNVDPRDHEFVVGATNPHLQPLAQVMSEAEARGKNGAELQAIEDAWIAEAGLKKFGTAV 312
[Close]
BLAST of mRNA_S-dermatodea_contig8029.16212.1 vs. uniprot
Match: S2JPI1_MUCC1 (Isocitrate lyase n=5 Tax=Mucor TaxID=4830 RepID=S2JPI1_MUCC1)

HSP 1 Score: 400 bits (1027), Expect = 3.520e-132
Identity = 189/302 (62.58%), Postives = 229/302 (75.83%), Query Frame = 1 
Query:  247 FNRDVEAAKRWWGSPRFRFTNRPFSAEEVVSLRGTLPETYPSNIQARKLWDLLEKKHGHGDFSHTFGALDPVQVIEMAPHLETVYVSGWQCSSTASTSNEPGPDFADYPYDTVPNKVDQLFRAQRLHDRRQNDERCAMSEHEREAFPPTDYLRPIIADGDTGHGGLTAVMKLTKMFIEKGAAGIHFEDQKPGTKKCGHMGGKVLVSMQEHCDRLIAARLQADIMGTETVIVARTDAEAASLLDNNVDRRDHPFILGTTVPGTRPLNDLIREAQGRGASFEEINALSKTWIENACLMRFPEAV 1152
            F ++VE  K+WW SPRF+   RP++AE +VS RG  P  Y SN+QA+KLW  L++    G  SHTFGALDPVQV +MAPHL+TVYVSGWQCSSTAS+SNEPGPD ADYP DTVPNKV+ LF AQ  HDR+Q + R +M+  ER   P  DYLRPIIADGDTGHGG+TAVMKLTKMF+E+GAAGIH EDQ PGTKKCGHM GKVLV + EH +RL+A R Q DIMG E V+VARTDAEAA+L+ +NVD RDH F++G+T P  +PL  ++ EA+GRG    E+ A+   W+  A L R+  AV
Sbjct:   11 FEQEVERVKQWWASPRFKLVKRPYTAESIVSKRGYFPVEYRSNVQAKKLWKTLQQNKATGQTSHTFGALDPVQVTQMAPHLDTVYVSGWQCSSTASSSNEPGPDLADYPMDTVPNKVEHLFFAQLFHDRKQREARLSMTPEERAKTPKIDYLRPIIADGDTGHGGITAVMKLTKMFVERGAAGIHVEDQAPGTKKCGHMAGKVLVPIAEHINRLVAIRAQYDIMGVENVVVARTDAEAATLITSNVDPRDHEFVVGSTNPSLKPLASVMHEAEGRGIQGAELQAIEDDWVSKAGLKRYGTAV 312
[Close]
BLAST of mRNA_S-dermatodea_contig8029.16212.1 vs. uniprot
Match: W3VUJ2_PSEA5 (Methylisocitrate lyase n=2 Tax=Moesziomyces TaxID=63261 RepID=W3VUJ2_PSEA5)

HSP 1 Score: 404 bits (1039), Expect = 5.900e-132
Identity = 202/348 (58.05%), Postives = 245/348 (70.40%), Query Frame = 1 
Query:  226 ASSHAKMFNRDVEAAKRWWGSPRFRFTNRPFSAEEVVSLRGTLPETYPSNIQARKLWDLLEKKHGHGDFSHTFGALDPVQVIEMAPHLETVYVSGWQCSSTASTSNEPGPDFADYPYDTVPNKVDQLFRAQRLHDRRQNDERCAMSEHEREAFPPTDYLRPIIADGDTGHGGLTAVMKLTKMFIEKGAAGIHFEDQKPGTKKCGHMGGKVLVSMQEHCDRLIAARLQADIMGTETVIVARTDAEAASLLDNNVDRRDHPFILGTTVPGTRPLNDLIREAQGRGASFEEINALSKTWIENACLMRFPEAVEAAIHATPGLPGRDQRLKEWQSKAYTLGHACARELSVKL 1269
            A    K F  +VEA K+WW +PRF  T RP++AE+VVS RGTL +TYPSN QA+KLW  LE     G  SHT+GALDPVQV +MA HLETVYVSGWQCSSTAS++NEPGPD ADYPY+TVP KV+ LF AQ  HDR+Q +ER  MS  +R   P  DYLRPI+AD DTGHGGLTAVMKLTK+F+EKGAAGIH EDQ PGTKKCGHM GKVLV +QEH +RL+A RLQ DIMG E ++VARTD+EAA+L+  NVD RDH FILGTT     PL D++  A+  GA   ++ AL   W+  A  +R+ +AV A +         +Q  KE    +     A A+ L V++
Sbjct:  164 ADQELKQFQEEVEAVKQWWKNPRFANTTRPYTAEQVVSKRGTLKQTYPSNTQAQKLWKTLEGHASKGTTSHTYGALDPVQVTQMAKHLETVYVSGWQCSSTASSTNEPGPDLADYPYNTVPLKVEHLFMAQLFHDRKQREERTNMSPEQRAKTPVVDYLRPIVADADTGHGGLTAVMKLTKLFVEKGAAGIHIEDQAPGTKKCGHMAGKVLVPIQEHINRLVAIRLQYDIMGVENLVVARTDSEAATLITTNVDERDHAFILGTTNTSLEPLVDILNRAEAEGADGPKLIALEDEWLAKAQPVRYGDAVAAELEKKGKKAEAEQFRKEVLGTSLIKAKAKAKSLGVEI 511
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig8029.16212.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FLB9_ECTSI1.110e-22685.22Isocitrate lyase n=2 Tax=Ectocarpus TaxID=2879 Rep... [more]
A0A835YPK9_9STRA1.460e-16770.14Isocitrate lyase n=2 Tax=Tribonema minus TaxID=303... [more]
W7TRS4_9STRA5.340e-14663.04Isocitrate lyase n=2 Tax=Monodopsidaceae TaxID=425... [more]
A0A7R9U2N8_9STRA1.510e-13962.85Isocitrate lyase n=1 Tax=Pinguiococcus pyrenoidosu... [more]
A0A139APG9_GONPJ3.860e-13559.48Isocitrate lyase n=1 Tax=Gonapodya prolifera (stra... [more]
A0A0G4IIC4_PLABS2.560e-13358.91Isocitrate lyase n=1 Tax=Plasmodiophora brassicae ... [more]
A0A0F7S1P4_9BASI3.740e-13357.18Isocitrate lyase n=15 Tax=Ustilaginales TaxID=5267... [more]
A0A1X2HRL6_SYNRA1.550e-13262.58Isocitrate lyase n=1 Tax=Syncephalastrum racemosum... [more]
S2JPI1_MUCC13.520e-13262.58Isocitrate lyase n=5 Tax=Mucor TaxID=4830 RepID=S2... [more]
W3VUJ2_PSEA55.900e-13258.05Methylisocitrate lyase n=2 Tax=Moesziomyces TaxID=... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig8029contigS-dermatodea_contig8029:1757..8505 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score645.2
Seed ortholog evalue2.2e-182
Seed eggNOG ortholog2880.D7FLB9
Preferred nameICL1
KEGG rclassRC00311,RC00313
KEGG koko:K01637
KEGG ReactionR00479
KEGG Pathwayko00630,ko01100,ko01110,ko01120,ko01200,map00630,map01100,map01110,map01120,map01200
KEGG ModuleM00012
GOsGO:0003674,GO:0003824,GO:0004451,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0005777,GO:0005782,GO:0005975,GO:0006081,GO:0006082,GO:0006083,GO:0006097,GO:0006629,GO:0006631,GO:0008150,GO:0008152,GO:0009056,GO:0009062,GO:0009514,GO:0009987,GO:0015976,GO:0016042,GO:0016054,GO:0016829,GO:0016830,GO:0016833,GO:0016999,GO:0017001,GO:0017144,GO:0019541,GO:0019543,GO:0019626,GO:0019629,GO:0019752,GO:0031907,GO:0031974,GO:0032787,GO:0042579,GO:0042737,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043436,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044262,GO:0044281,GO:0044282,GO:0044422,GO:0044424,GO:0044429,GO:0044438,GO:0044439,GO:0044444,GO:0044446,GO:0044464,GO:0045733,GO:0046395,GO:0046421,GO:0046459,GO:0046487,GO:0070013,GO:0071704,GO:0072329,GO:1901575
EggNOG free text desc.isocitrate lyase activity
EggNOG OGsCOG2513@1,KOG1260@2759
EC4.1.3.1
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionIsocitrate lyase (Isocitrase) (Isocitratase) (ICL)
Ec32 orthologEc-12_007550.1
Exons10
Model size1288
Cds size1287
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig8029.16212.1prot_S-dermatodea_contig8029.16212.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig8029 1757..8505 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622925315.0100825-CDS-S-dermatodea_contig8029:1756..20141622925315.0100825-CDS-S-dermatodea_contig8029:1756..2014Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8029 1757..2014 +
1694079849.444103-CDS-S-dermatodea_contig8029:1756..20141694079849.444103-CDS-S-dermatodea_contig8029:1756..2014Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8029 1757..2014 +
1622925315.0229626-CDS-S-dermatodea_contig8029:4433..45561622925315.0229626-CDS-S-dermatodea_contig8029:4433..4556Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8029 4434..4556 +
1694079849.4572656-CDS-S-dermatodea_contig8029:4433..45561694079849.4572656-CDS-S-dermatodea_contig8029:4433..4556Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8029 4434..4556 +
1622925315.0325892-CDS-S-dermatodea_contig8029:5172..52561622925315.0325892-CDS-S-dermatodea_contig8029:5172..5256Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8029 5173..5256 +
1694079849.4663236-CDS-S-dermatodea_contig8029:5172..52561694079849.4663236-CDS-S-dermatodea_contig8029:5172..5256Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8029 5173..5256 +
1622925315.0483859-CDS-S-dermatodea_contig8029:5548..56221622925315.0483859-CDS-S-dermatodea_contig8029:5548..5622Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8029 5549..5622 +
1694079849.4757924-CDS-S-dermatodea_contig8029:5548..56221694079849.4757924-CDS-S-dermatodea_contig8029:5548..5622Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8029 5549..5622 +
1622925315.05758-CDS-S-dermatodea_contig8029:5960..60661622925315.05758-CDS-S-dermatodea_contig8029:5960..6066Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8029 5961..6066 +
1694079849.4860377-CDS-S-dermatodea_contig8029:5960..60661694079849.4860377-CDS-S-dermatodea_contig8029:5960..6066Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8029 5961..6066 +
1622925315.068123-CDS-S-dermatodea_contig8029:6392..65631622925315.068123-CDS-S-dermatodea_contig8029:6392..6563Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8029 6393..6563 +
1694079849.496881-CDS-S-dermatodea_contig8029:6392..65631694079849.496881-CDS-S-dermatodea_contig8029:6392..6563Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8029 6393..6563 +
1622925315.0782611-CDS-S-dermatodea_contig8029:7183..72941622925315.0782611-CDS-S-dermatodea_contig8029:7183..7294Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8029 7184..7294 +
1694079849.5068169-CDS-S-dermatodea_contig8029:7183..72941694079849.5068169-CDS-S-dermatodea_contig8029:7183..7294Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8029 7184..7294 +
1622925315.0917034-CDS-S-dermatodea_contig8029:7693..78001622925315.0917034-CDS-S-dermatodea_contig8029:7693..7800Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8029 7694..7800 +
1694079849.5207093-CDS-S-dermatodea_contig8029:7693..78001694079849.5207093-CDS-S-dermatodea_contig8029:7693..7800Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8029 7694..7800 +
1622925315.1082783-CDS-S-dermatodea_contig8029:8042..81541622925315.1082783-CDS-S-dermatodea_contig8029:8042..8154Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8029 8043..8154 +
1694079849.5388494-CDS-S-dermatodea_contig8029:8042..81541694079849.5388494-CDS-S-dermatodea_contig8029:8042..8154Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8029 8043..8154 +
1622925315.1212542-CDS-S-dermatodea_contig8029:8364..85051622925315.1212542-CDS-S-dermatodea_contig8029:8364..8505Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8029 8365..8505 +
1694079849.5484352-CDS-S-dermatodea_contig8029:8364..85051694079849.5484352-CDS-S-dermatodea_contig8029:8364..8505Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8029 8365..8505 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig8029.16212.1

>prot_S-dermatodea_contig8029.16212.1 ID=prot_S-dermatodea_contig8029.16212.1|Name=mRNA_S-dermatodea_contig8029.16212.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=429bp
SVAGREPEPTASKVQLQHSAGSLDRCRKSIATQQSTGTQKDREGREVQIH
QRYSVEMPASMYGQQLFGHGTESRDASSHAKMFNRDVEAAKRWWGSPRFR
FTNRPFSAEEVVSLRGTLPETYPSNIQARKLWDLLEKKHGHGDFSHTFGA
LDPVQVIEMAPHLETVYVSGWQCSSTASTSNEPGPDFADYPYDTVPNKVD
QLFRAQRLHDRRQNDERCAMSEHEREAFPPTDYLRPIIADGDTGHGGLTA
VMKLTKMFIEKGAAGIHFEDQKPGTKKCGHMGGKVLVSMQEHCDRLIAAR
LQADIMGTETVIVARTDAEAASLLDNNVDRRDHPFILGTTVPGTRPLNDL
IREAQGRGASFEEINALSKTWIENACLMRFPEAVEAAIHATPGLPGRDQR
LKEWQSKAYTLGHACARELSVKLLDGKQV
back to top

mRNA from alignment at S-dermatodea_contig8029:1757..8505+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig8029.16212.1 ID=mRNA_S-dermatodea_contig8029.16212.1|Name=mRNA_S-dermatodea_contig8029.16212.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=6749bp|location=Sequence derived from alignment at S-dermatodea_contig8029:1757..8505+ (Saccorhiza dermatodea SderLu1190fm monoicous)
TCTGTAGCCGGCCGCGAACCAGAGCCCACCGCGTCGAAGGTCCAGCTACA
ACATTCAGCCGGAAGTCTAGACAGGTGTCGAAAATCGATTGCAACCCAGC
AGTCGACAGGAACACAAAAGGACAGGGAGGGAAGAGAAGTTCAAATCCAT
CAACGATATTCTGTCGAGATGCCGGCTTCCATGTACGGGCAGCAGCTCTT
CGGGCACGGAACCGAGTCCCGCGATGCTTCGAGCCACGCTAAGATGTTCA
ACCGAGATGTGAGTCCGGCAGGTGGACGCGTTCGGCAGTGTGATCAATGG
CTGGCCCGGTATTTTTACCTCAGTGACACGCGGGATGGTTTTTGGTTTGT
TTGGGTTGATTGATTTATTTATTATTGCTCGGATCGATCTGCTGTGCTGA
CCTCGCTGGATCTCACAAGCAACCATCGCGCGAACTCGCGTCTCAACACC
TTTGTCGCCCGACAGCACTCGTATATTTATCTACGTAGGTGAGGGTAGTC
AGGGGATCCTCGATAGCGCTTTATCACGTCGAGGGCGAGGCATTCGACGT
CGTTGGGACTGACGAAAGAAAGACCTGATGCCAAGAGTAAAAAAATAAGA
ACCTGCCTCGTGGTTGCGCCGAGTCCCCATCGTGAAGGGGAACACGTTGG
CGGCAACACCTCTGAACATTGATGCGAATATCGTCAGCTCTAATACTCTC
TACGGCGGTGTACCAACTCATGCACCCCCCGGTAGTCGATGCATGGCGTC
CACCAAAGATGAAGGGGTGTCTTGATGGCACGGTCTTCGCTGACACGGCT
TATCTGTAGAGCCTCTATTGATGTACATACAAGTACAGTATATACAACCC
GAATCAATCGCAGCTCAGCTTTGTTTCAGGCACAGACGCGTGCTTCCTAA
CGGGCGGATACAGCGGGCCCATCGTTCAACGATACCGCCTTCACCTTATT
AATATATACATCCATCCTTGACCGCAGAGCCTTCCACTCACTCACGTGAT
CCCCCTCAGGAGTATCCGGTGTGTCGCGTCGTGTGTCATGTGAGGCGAAT
GGGCTCTCCTGCGGCAGATTGATTCGTTTGCGGTGGTATATGTTCAGTAA
TATAAAGTAAAAACAAAAAGCATTACGTTACAGAGTATGCATGCCTGAAG
AGAAGTATCTATCTGATGTCGGTCACCCATGTACAACAACAGCAGTTTTG
AAATCTGCTGGTCTCAAAAAAGGGGCGATTGAGGCATGCTTCGCGGCTAT
GTTCGTATGTACGGCCCACGTTTTGTCAGCGCTTGCGCCTTGCCGTCGTG
GAAATTACAAATTACGCTTTCGACATCTGGCCGAGTGATGCGCCCAGGGG
AATCTGCCCGATCGACTTGCATCTTCTTGGAATTTCCATAAATATTCTCT
TGGTTTTGTATGATCTTTTTCGAAATCCGAGTTGAAGTTGCAGTGCGGAC
GGGTTGTGGTTCTGTGATCTCTCGAAAGCCCTGTTCTCAGCTGCTGCCAC
GGTTTCTAAAACACGCCGCAACCTTAGGCGCTGTCATTTTCCCGCGTGTA
AGGTTGTTGGTTGTCGTATGATAGCAGCCTTGGTTATTTAGTTCATGTTG
TGCTTCATGTTCGCAGCCGGTGGTCTATTGCGCCGCAGCGTGTTCTGTTG
CTGCAACAGCCACAAATTAACTATGTTCTTCTGCGTGATGCGGCTGTATT
CCTACTTTGTTGGGAAGATGGCTCACTGGTGGGGCAACAACGGGACGTGA
TGAGTGGAGACGGGGATGCTGCTTGGGCGCACATGCCCCTGCGCTCATTG
CTTCGTTCTAAGGCCAAACGCTACATACGGGAGACACACACAAATTCGTC
TGCTCCTGGGTATACAGCTCTGTTGTATGGGTGTTGGATTTGAGCCGTGG
CCCAAAGAGAGCCCGGCGTCCCTACAATAGGAAGTTGAGGCACGTTTGCG
CGGGGGGGGCGCGATGGTCAGGGCCATTTATTCTGGATATTATGTTACTA
ATTTTCCGACCTTCTCTCGTGCTCTGTGGGTGTGCTTGCGATTCTTCGCG
GACACACAAAAAAGGGGCAACTTTCGTAGATCAAGCGGGGATCATGAGCC
AACTCGCAGAACTTGAAGGAATTTCGGAAAAAACAAAAAACACCGGAGTA
AACAAATAAACGGCCTACATACATATATGGGATATGGGATATGATGATAG
GAAATTAGTTACCTCTAGGTTGACCAAGCAATATTCCCGTGGAGTTTGTT
TTACGACTCCCCAATTTCCGAGTCTGCAAATTGTCGGAGGGCAAATTAAT
ATTATACACGGCGTACACCGTCGCGTCCCCAGTGCAAAAGCGCCTTAACT
TGGATGGCAACGCCAGTCTTGCTTTATTTTCCCACACCTCAAGTCCAACA
GCCACATTCATCCAGGAGCAGCTATTTTTAAAACATTTTTTGTGTGTGGC
CCATAGCGTTTAACCTATATCAGCTTTGCCTGCAAAATACTGTCCATGTT
TTTGAGCAAAACGTCCGATCAGCTTTTAAGCCACGCACGAGTGCGGCAGA
ATTAACCTCGACACGACCACCTTGCTGAACACGCTTTTGCTCGCTCATTG
TTGCAACGCCGCGCCTCGTCTCTTGTGGCCTACCTATCCCACGCCATCAA
CCACACGTCAAATCATCGACGCGATAGGTGGAGGCCGCGAAGCGTTGGTG
GGGAAGCCCTCGCTTCCGCTTCACCAACAGGCCTTTCAGTGCCGAGGAGG
TGGTATCTCTACGGGGCACACTGCCCGAGACGTACCCCTCCAACATTCAG
GTATTTGCCCCATCCGCTGGCGTTGACCGACCTCTCGGGGAGGATGACCC
ACGGTACTTTGCAGTATGGAGGCTTTTGTCTCCCGTTTTTCTCTCGTAGA
TGTCTGACTTTAGCTGTGACGTCGGAGCATAGTAAACAGACCCACATTGA
CTTTTTCACAAAACGCCTATGCATGGCCCCGACCGATCATGTTGTCCGAT
TTGTTTCCTTCTCTTTCTCCTAGAAGACAGGAATCTCGACCGGAAGGTTG
CATAGATGTTGTAGGGCTCTAAGGCTGGATTATATTACCTATGTTCCTCC
AAAGAGAGTACATAGGAAAAACACTTCCACCCAGTTCGCCGCTCTATGCA
TACTTGTAGCATAGCTGCGATGAATTCTTCAGAAGTGCGTGTATGCCGCG
GCGAAAACGTTGACCCAGGTACGTAAACACCGCGACTAAGCACTAAGTTC
ACATGTGATGCAAGGCAAACCAACCGGTTTTTCTAGTGGTTTCCTGATAA
CGCTAGGCTTTCAGCGAGCCGCCTACACAAGTACGGCTCACGTTCGAGGA
GTTGGATCAAATCGAGAGCTTACCTTACCTTTATGCCGTTTCGTATTGCG
CGGTATTCCACTGCAGGCCCGCAAGCTTTGGGATCTGCTGGAGAAGAAAC
ATGGCCACGGCGACTTCTCACACACGTTCGGCGCCCTTGACCCCGTTCAG
GTAAAAGCGTAAAAAACGGTGTCACCAGAGGCGTTTCTTTTTAAAGTTGT
AGGGGGTACAGTAGCAGCGTGTGTTGCAGTCGTAGAAATTGAGTCCTCAA
GCGTAACGGCGACTGTTCAATGGAATTGGGAGAGGTGGAACTTAAAAAAA
AATACTTGCTTGGGGAGTAAGGGGATACCGCACTGTTGGCGGAAACTCAC
CCAAATAGTCAAATAATCGCGAGACGGACGCCTTCCCTGCTATGACAGCC
GTTACGCCTTTTGTTTTTGCGCCACATACGTTTACATTCCAGGTAATCGA
GATGGCGCCTCACCTGGAAACAGTGTACGTCAGTGGCTGGCAGTGCTCCT
CTACCGCCAGCACAAGGTATGTTGACCAAGTTCTGCGAACCTTATCTGCG
TTTGCTGTCGATTACTATGATGCTAGTAAAGCTGTTTGTGCCCATCTCTT
TCGCGGAGAGACCGCATGTCAAGACGTGTCCGTTGGTGTGGAGATATGAT
ATGGAGATTACTAGTGGAACCAACGCGGCAACAAGCTCCTCCTTCGTCTT
AGGCGTTGCGTTTTGGCGATATGCGTATGACCACCTTTTTTTGTCGGGCT
GTCGGAGGTATACCAAACGAGGCAGTACATGCCACAATTCACTCGTTCCG
TAAATTTTTGCTTCCGCGACCCTGACTTGGTTTCCTTGCTTTTCTCCCCG
CCAGCAACGAGCCCGGACCAGATTTCGCAGACTACCCTTACGACACCGTT
CCCAACAAGGTCGACCAGCTCTTCAGGGCGCAGAGGCTCCACGACCGCCG
CCAAAACGACGTAAGCCTTATAGTCTTACAGTGGGCGGGATGACTCGTAC
GGAAAAATGCAATGGACGACGACAGTGATAGAAATCAAGTGGTAGCAGGC
TAGAGGCAACACGAACTCTTGCGTTTCCAGCATGAGCACGAGGGGCTCCG
GTGTAAAATAATTTGCAAGAGTTTTCAGCATTCGAGTTGATACTGGTCCG
CCCCCGCCTACTGTCTTCTCCATTTGGTAGAAATGCTGCCCTCCGAATGA
ATTTCCATCGCCGCAACAGCCCGATGCCGATGCTGACCCCCCCCGCCCCC
CCAACGCCAACGTACACACACCGCTCAATGTTACAGGAGCGCTGCGCCAT
GAGCGAGCACGAACGCGAGGCCTTTCCCCCGACAGACTACCTCCGTCCCA
TCATTGCCGACGGGGATACCGGCCACGGCGGGCTGACAGCCGTGATGAAG
CTCACGAAAATGTTCATTGAGAAGGGAGCCGCAGGCATCCACTTCGAGGA
CCAGAAGGTATGTTTTGGCCAGGACGTGGGGATTGCGGAGCGTAACGTCG
ACCTTGATCAAGGGTCATTTCCAGTACGGTCGTCGTGACGATTTGTTTTT
GCGGGAGTTCGATTATCTGCAGCCGAGAATGCCTGGAGCGAACCTAATCT
CCCAAAAGATCCCGCCTGTGGAATATTTCACGGGCTATGAACCCCGTTTC
TCTAGCACGAGCCAACATCGCGGCCATCGCCCGTTACTGTGCAAGACTTG
AACTTCTCTTCACTAAAATTAGAAACAAATAAGAGAGGAGTGATAACCTT
CGACCTTTCTCGGGAAATGAGAGGGTAGGCAAACGCTTGTTGAGTGCCCA
GTTCAGCGCAGAGTTTTAGGAACGCCGGCAGTTCCCTTTGGCAACTAAAG
CGTCACCGCGCGGCAGTGTTGATGATTATCTCGTCGGGCTTCGATCTGCA
GCAACCAGTGTGCCGCTGCGCAGCAATGGGTATGATTGGCTCGACGAGTC
TCGTTCTTCAAGTTGCACTTCAGCTGTGTTATCTTCGTTCGTGTCCGATC
TTGAGCACAACCTGGTTGCACGTAGCCGTTTGAATTTTTCTCGAACGATC
TGCGTTACCCTTTTACATTCGTGGCAGCCTGGAACAAAGAAGTGCGGACA
CATGGGCGGGAAGGTGCTGGTGTCAATGCAAGAGCACTGCGACAGGCTCA
TAGCCGCCAGGCTTCAGGCCGACATCATGGGCACCGAGGTCAGTATATAC
ATGGTTCCATTTTCCACGCCTAATAAGTGCAACACGCTAGCTTGTGGCGA
TTATCGCTTGCAGCGTGCTGTTTACCCTCCATGAAAGTTGGCACTATTTT
CGTCGAGACAATAATAGCCGAGCGCGATCATACGTTGCGTCCTACTGCTA
GTCAATCCCTCCAAATCGTGGCGGGACGCTGAGGACGATGTGGTGCCTTC
GTCACTTTATTTCGACCCGTGGTAATACGAGTGTGCGCAATATTGAAGGG
TCGTTTTAGAGACAATTTCGGACCAGCCACCACTGCTTGCGGCAGAGTAA
CCCATGCAAAGTACGAAAACCAACTCAGATGACCAATCACCACATCAAAC
CTGAAGCCCGAATGATCCCCGCCCTACGCACGCACAGACGGTGATCGTGG
CACGCACCGACGCCGAAGCTGCCAGCCTGCTGGACAACAACGTTGACCGC
CGCGACCATCCCTTCATCCTTGGCACCACTGTTCCAGGCACCAGGCGAGG
CGTCGCCATGGAGAAAGGGAGGCGTTATTGCTGAGAAATAGGGGGGGGGT
TCGAAGGTTTTTGATATCCTGGGATAAGCCCTTGGATTATATAACGCTGA
AACGAACAAGATTTTACTCCCCGCATCAGCGCCCAACGTTTTCAGTCAAC
GGCTGGCTATCATACACACAATCGATTGCATTCTCACCGCGCAAAAATCA
CATGTTGCTGCGTTTGCTGTCTGTCACGGCTTTCAGGCCTCTGAACGATC
TGATTCGCGAGGCACAGGGAAGGGGCGCGTCCTTCGAGGAGATCAATGCG
CTTAGCAAGACGTGGATTGAGAACGCTTGCCTTATGCGCTTCCCTGAGGT
AGGTTTGGCCCGAGACTACTGTAAATAGTAAATATAACGTACTGGCGTAT
CGACTACTGTCTCGCAGATTTTTTATTTCAAACGCGTTACTTGTCAAATA
CACACGTGTCGCCCATTCACCGACGACTGATATTCTCGACAAAACCAGCC
ACCGGGCCACCCCATCACATTTTTATCTCCCCACGTGATGTCCGCGTCGT
ACAAACAGGCCGTCGAGGCTGCCATCCACGCCACCCCTGGGCTTCCTGGG
CGCGACCAGCGGCTGAAGGAGTGGCAATCCAAGGCCTATACCTTGGGACA
CGCATGCGCCAGGGAGCTGAGCGTTAAGCTCCTCGACGGCAAGCAGGTG
back to top

Coding sequence (CDS) from alignment at S-dermatodea_contig8029:1757..8505+

>mRNA_S-dermatodea_contig8029.16212.1 ID=mRNA_S-dermatodea_contig8029.16212.1|Name=mRNA_S-dermatodea_contig8029.16212.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=2574bp|location=Sequence derived from alignment at S-dermatodea_contig8029:1757..8505+ (Saccorhiza dermatodea SderLu1190fm monoicous)
TCTGTAGCCGGCCGCGAACCAGAGCCCACCGCGTCGAAGGTCCAGCTACA
ACATTCAGCCGGAAGTCTAGACAGGTGTCGAAAATCGATTGCAACCCAGC
AGTCGACAGGAACACAAAAGGACAGGGAGGGAAGAGAAGTTCAAATCCAT
CAACGATATTCTGTCGAGATGCCGGCTTCCATGTACGGGCAGCAGCTCTT
CGGGCACGGAACCGAGTCCCGCGATGCTTCGAGCCACGCTAAGATGTTCA
ACCGAGATTCTGTAGCCGGCCGCGAACCAGAGCCCACCGCGTCGAAGGTC
CAGCTACAACATTCAGCCGGAAGTCTAGACAGGTGTCGAAAATCGATTGC
AACCCAGCAGTCGACAGGAACACAAAAGGACAGGGAGGGAAGAGAAGTTC
AAATCCATCAACGATATTCTGTCGAGATGCCGGCTTCCATGTACGGGCAG
CAGCTCTTCGGGCACGGAACCGAGTCCCGCGATGCTTCGAGCCACGCTAA
GATGTTCAACCGAGATGTGGAGGCCGCGAAGCGTTGGTGGGGAAGCCCTC
GCTTCCGCTTCACCAACAGGCCTTTCAGTGCCGAGGAGGTGGTATCTCTA
CGGGGCACACTGCCCGAGACGTACCCCTCCAACATTCAGGTGGAGGCCGC
GAAGCGTTGGTGGGGAAGCCCTCGCTTCCGCTTCACCAACAGGCCTTTCA
GTGCCGAGGAGGTGGTATCTCTACGGGGCACACTGCCCGAGACGTACCCC
TCCAACATTCAGGCCCGCAAGCTTTGGGATCTGCTGGAGAAGAAACATGG
CCACGGCGACTTCTCACACACGTTCGGCGCCCTTGACCCCGTTCAGGCCC
GCAAGCTTTGGGATCTGCTGGAGAAGAAACATGGCCACGGCGACTTCTCA
CACACGTTCGGCGCCCTTGACCCCGTTCAGGTAATCGAGATGGCGCCTCA
CCTGGAAACAGTGTACGTCAGTGGCTGGCAGTGCTCCTCTACCGCCAGCA
CAAGGTAATCGAGATGGCGCCTCACCTGGAAACAGTGTACGTCAGTGGCT
GGCAGTGCTCCTCTACCGCCAGCACAAGCAACGAGCCCGGACCAGATTTC
GCAGACTACCCTTACGACACCGTTCCCAACAAGGTCGACCAGCTCTTCAG
GGCGCAGAGGCTCCACGACCGCCGCCAAAACGACCAACGAGCCCGGACCA
GATTTCGCAGACTACCCTTACGACACCGTTCCCAACAAGGTCGACCAGCT
CTTCAGGGCGCAGAGGCTCCACGACCGCCGCCAAAACGACGAGCGCTGCG
CCATGAGCGAGCACGAACGCGAGGCCTTTCCCCCGACAGACTACCTCCGT
CCCATCATTGCCGACGGGGATACCGGCCACGGCGGGCTGACAGCCGTGAT
GAAGCTCACGAAAATGTTCATTGAGAAGGGAGCCGCAGGCATCCACTTCG
AGGACCAGAAGGAGCGCTGCGCCATGAGCGAGCACGAACGCGAGGCCTTT
CCCCCGACAGACTACCTCCGTCCCATCATTGCCGACGGGGATACCGGCCA
CGGCGGGCTGACAGCCGTGATGAAGCTCACGAAAATGTTCATTGAGAAGG
GAGCCGCAGGCATCCACTTCGAGGACCAGAAGCCTGGAACAAAGAAGTGC
GGACACATGGGCGGGAAGGTGCTGGTGTCAATGCAAGAGCACTGCGACAG
GCTCATAGCCGCCAGGCTTCAGGCCGACATCATGGGCACCGAGCCTGGAA
CAAAGAAGTGCGGACACATGGGCGGGAAGGTGCTGGTGTCAATGCAAGAG
CACTGCGACAGGCTCATAGCCGCCAGGCTTCAGGCCGACATCATGGGCAC
CGAGACGGTGATCGTGGCACGCACCGACGCCGAAGCTGCCAGCCTGCTGG
ACAACAACGTTGACCGCCGCGACCATCCCTTCATCCTTGGCACCACTGTT
CCAGGCACCAGACGGTGATCGTGGCACGCACCGACGCCGAAGCTGCCAGC
CTGCTGGACAACAACGTTGACCGCCGCGACCATCCCTTCATCCTTGGCAC
CACTGTTCCAGGCACCAGGCCTCTGAACGATCTGATTCGCGAGGCACAGG
GAAGGGGCGCGTCCTTCGAGGAGATCAATGCGCTTAGCAAGACGTGGATT
GAGAACGCTTGCCTTATGCGCTTCCCTGAGGCCTCTGAACGATCTGATTC
GCGAGGCACAGGGAAGGGGCGCGTCCTTCGAGGAGATCAATGCGCTTAGC
AAGACGTGGATTGAGAACGCTTGCCTTATGCGCTTCCCTGAGGCCGTCGA
GGCTGCCATCCACGCCACCCCTGGGCTTCCTGGGCGCGACCAGCGGCTGA
AGGAGTGGCAATCCAAGGCCTATACCTTGGGACACGCATGCGCCAGGGAG
CTGAGCGTTAAGCTCCTCGACGGCAAGCAGGTGGCCGTCGAGGCTGCCAT
CCACGCCACCCCTGGGCTTCCTGGGCGCGACCAGCGGCTGAAGGAGTGGC
AATCCAAGGCCTATACCTTGGGACACGCATGCGCCAGGGAGCTGAGCGTT
AAGCTCCTCGACGGCAAGCAGGTG
back to top