prot_S-dermatodea_contig8005.16193.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig8005.16193.1
Unique Nameprot_S-dermatodea_contig8005.16193.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length360
Homology
BLAST of mRNA_S-dermatodea_contig8005.16193.1 vs. uniprot
Match: D8LD92_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD92_ECTSI)

HSP 1 Score: 83.2 bits (204), Expect = 4.260e-14
Identity = 124/384 (32.29%), Postives = 165/384 (42.97%), Query Frame = 0
Query:   13 VRFSQQISVVLVASRVELSSVKADVWWGEKDYCGFRREYVNAARKQNATKRETERQRKRVAENSTAR----------AAAAPTGTDSDTIGTARNGRL------------DPAPPGTEGWTVGAPPPMHGG-DVTSLAESPLSPPAQRPXXXXXXXTPEHVRARRSSDLSPEEGLAAGGEIVAMLHLDVLQAEPGAAAATVEGSVGSSPPI----AAGVEPPVEAGAADAAAGPPQTDRDHGSMAA--NGSAAAAPQ--CREVPPGEERLLPRAVAAV----DIAAVARGFPWRAERTSSMEAAAARSPGSSVTATARAAARAA-AVIADAKRDGSVGSRGDSVWRVQKGEGPATH-KTGKTTCNGRAPLAFLGDAPIRRVTSF 359
            VRFS QI V+LVASR+ELSSVK D+WWGE+DYC FRR Y  AAR++    RE   Q  R  + +  R           A +PT   S    ++RNG               P+    +G    +     GG    S A  P  PP           +PEH      ++L  + G+  G + ++ L  D   A  G      +G  G +PP      AGV   + + A +       T   H  +A       AA+P+   R VP     +    +  V    DI +VARGFPWR      +  AA RSPGSS    ARA A A     A+ +R+     R   +  ++ G  P    +TG      R  L FLG A IRRV SF
Sbjct:    5 VRFSNQIRVILVASRLELSSVKTDIWWGERDYCDFRRAYFKAAREEKENDREVTSQ-SRAGQGTPGRDEFDRPGSSPVATSPTTATSAGHPSSRNGSAAAAHDVDDDLPSKPSCGSRDGGGYDSDYDDRGGCSRASQAVLPRPPPP----------SPEHQTREPHAELD-DAGVRVGVKRLSGLLDDQRVAAAGEWEREKDGG-GMTPPHDVGEQAGVSAAITSSAVETVVVAESTAIVHADVAVPQQRKQAASPERRARPVPAKAAEVTAEGIGRVGTSPDITSVARGFPWRG--AGPLGDAAMRSPGSSAVGPARAKALACPCAAAEMRREMR---RETQMPILETGRDPRIDPQTG-----ARVSLPFLGSARIRRVASF 365          
BLAST of mRNA_S-dermatodea_contig8005.16193.1 vs. uniprot
Match: A0A6H5L2K1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2K1_9PHAE)

HSP 1 Score: 80.5 bits (197), Expect = 7.440e-13
Identity = 121/380 (31.84%), Postives = 165/380 (43.42%), Query Frame = 0
Query:   13 VRFSQQISVVLVASRVELSSVKADVWWGEKDYCGFRREYVNAARKQNATKRETERQRKRVAENSTAR----------AAAAPTGTDSDTIGTARNGR-----------LDPAPPGTEGWTVGAPPPMHGGDVTSLAESP-LSPPAQRPXXXXXXXTPEHVRARRSSDLSPEEGLAAGGEIVAMLHLDVLQAEPGAAAATVEGSVGSSPPIA----AGVEPPVEAGAADAAAGPPQTDRDHGSM--AANGSAAAAPQCREVPPGEERLLPRAVAAVDIAAVARGFPWRAERTSSMEAAAARSPGSSVTATARA----AARAAAVIADAKRDGSVGSRGDSVWRVQKGEGPATH-KTGKTTCNGRAPLAFLGDAPIRRVTSF 359
            VRFS QI VVLVASR+ELSS+K D+WWGE+DYC FRR Y  AAR++  +  E      R  + +  +           A +PT   S  + ++R+G            L     G+ G          GG  +   +S   S  +Q         +PEH       +L  + G+  G + ++ L  D   A  G      +G  G +PP A    AG    + + A + A     T   H  +        AA+P+ RE P   +  +     A ++A+VARGFPWR     S   AA RSPGS     ARA      RAAA +    R      R   +  ++ G  P    +TG      R PL FLG APIRRV SF
Sbjct:  257 VRFSNQIRVVLVASRLELSSMKTDIWWGERDYCDFRRAYFKAAREEKESDGEVTPP-SRAGQGTPGQDEFDRPGSSPVATSPTTATSAGLSSSRSGSAVAXXXXXXDLLSKPSCGSRG---------DGGYDSDCDDSGGCSRASQAVLPRPPPPSPEHQTHEPHVELD-DAGVLVGVKRLSGLLDDQRVAVAGEWERENDGG-GMTPPHAVNEQAGSSAAITSNAVETAVVAESTATVHADVFIPQQPKQAASPERREWPVLAKAAVVTPGTAPNVASVARGFPWR--EAGSRGDAAMRSPGSVAVGPARAEELACPRAAAEVRREIR------RETQLPILETGRDPRIDPRTG-----ARVPLPFLGSAPIRRVASF 611          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig8005.16193.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LD92_ECTSI4.260e-1432.29Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L2K1_9PHAE7.440e-1331.84Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 55..75

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig8005contigS-dermatodea_contig8005:6910..9199 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig8005.16193.1mRNA_S-dermatodea_contig8005.16193.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig8005 6910..9199 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig8005.16193.1 ID=prot_S-dermatodea_contig8005.16193.1|Name=mRNA_S-dermatodea_contig8005.16193.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=360bp
SGVSARRRAGARVRFSQQISVVLVASRVELSSVKADVWWGEKDYCGFRRE
YVNAARKQNATKRETERQRKRVAENSTARAAAAPTGTDSDTIGTARNGRL
DPAPPGTEGWTVGAPPPMHGGDVTSLAESPLSPPAQRPPPPPPPPTPEHV
RARRSSDLSPEEGLAAGGEIVAMLHLDVLQAEPGAAAATVEGSVGSSPPI
AAGVEPPVEAGAADAAAGPPQTDRDHGSMAANGSAAAAPQCREVPPGEER
LLPRAVAAVDIAAVARGFPWRAERTSSMEAAAARSPGSSVTATARAAARA
AAVIADAKRDGSVGSRGDSVWRVQKGEGPATHKTGKTTCNGRAPLAFLGD
APIRRVTSF*
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