prot_S-dermatodea_contig8001.16188.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig8001.16188.1
Unique Nameprot_S-dermatodea_contig8001.16188.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length256
Homology
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BLAST of mRNA_S-dermatodea_contig8001.16188.1 vs. uniprot
Match: D7G1K8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1K8_ECTSI)

HSP 1 Score: 244 bits (624), Expect = 4.690e-77
Identity = 169/296 (57.09%), Postives = 196/296 (66.22%), Query Frame = 0 
Query:    1 MRAQMFTIFTLGLAASGVHAAAPTYSCFPIPDEGQTNPLGEGMEDVVEAECCEALIDDSDILAERIVVWDPLNCNHGPGETAITEAPLCRAHDTDGCRFCRESCDDFEGLCILCDDIYATYATTGSPTXXXXXXXXXXXXT----------DAPFGIFPETPAPTVPGPAAAPTTDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXT------------------------------EIEVLETRGKTMVCDPTCSDGTDLTWGVLNCNYFALGQDCRTCADTCEE 256
            MR+ + T+   GL +    +AAPTYSCF  PDEGQTNPLGEGMEDVVE+ECCEALID+SD++A+R V+WDP+NCNHGPG+  I EA LCRAHDTDGCRFC +SCD +EGLCI C+++      + SPT            T          +APFGIFP TPAP  P     PT   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                               E+ VL  R K MVCDPTCSD +DL WGV+NCNYFALGQ+CR C+D C++
Sbjct:    1 MRSDIATVIAFGLLSVCPVSAAPTYSCFDPPDEGQTNPLGEGMEDVVESECCEALIDESDMMADREVIWDPVNCNHGPGDEPIAEAYLCRAHDTDGCRFCHDSCDGYEGLCITCEEVLEDLLNSDSPTPSPDFETSEFPATPAPAILTAATEAPFGIFPATPAPVAP--VXXPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPAPTAEASDCECVNSLSEEEMAVLTRRSKNMVCDPTCSDQSDLVWGVMNCNYFALGQNCRACSDLCDD 294
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig8001.16188.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G1K8_ECTSI4.690e-7757.09Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..256
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..20
score: 0.854

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig8001contigS-dermatodea_contig8001:12..3867 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig8001.16188.1mRNA_S-dermatodea_contig8001.16188.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig8001 12..3867 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig8001.16188.1 ID=prot_S-dermatodea_contig8001.16188.1|Name=mRNA_S-dermatodea_contig8001.16188.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=256bp
MRAQMFTIFTLGLAASGVHAAAPTYSCFPIPDEGQTNPLGEGMEDVVEAE
CCEALIDDSDILAERIVVWDPLNCNHGPGETAITEAPLCRAHDTDGCRFC
RESCDDFEGLCILCDDIYATYATTGSPTPSPSEFGGGGGGTDAPFGIFPE
TPAPTVPGPAAAPTTDAGSETPSPAAGAGGDGTGGSDETPAPVTVGDCDC
NENMSQTEIEVLETRGKTMVCDPTCSDGTDLTWGVLNCNYFALGQDCRTC
ADTCEE
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