prot_S-dermatodea_contig8.16183.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig8.16183.1
Unique Nameprot_S-dermatodea_contig8.16183.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length272
Homology
BLAST of mRNA_S-dermatodea_contig8.16183.1 vs. uniprot
Match: A0A6H5K4C0_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K4C0_9PHAE)

HSP 1 Score: 375 bits (962), Expect = 4.600e-128
Identity = 193/257 (75.10%), Postives = 219/257 (85.21%), Query Frame = 0
Query:   17 RGARRTSSGVRMMQGQEFATCSEDDFRAYIIGWTLVWSGIIPYTFMAAK---NVLGEVLTVKALPAVSKGEDSTISNQSLLLYKDPIKLLDIINIVGRFQTFDDVQTVKGKSGKMSDLLFRDTFKASTLRSRKFTGWPKGPDGQPVLQDAFDGDVKAVTRSIAKRELSESAMNAVFDSFVGSPLSIVADRQEVDNQLENWRKDNTFDIKGFEQGLLVGRLLFLFVVLSVVALELAGYSVFFVEPIIIRYGNPLSFLG 270
            R A  +    RM+ GQ+FATCSE DFRAYIIGWT VWSGIIPYTF+A+K   NVLGEV+  KA   V +GED+TISNQSLLLYKDPIKLLDI+NIVGRFQTFDDVQ  KG  G MSD LFR+TFK + LR  KF GWP GPDGQP L+DAF GDVKAV+R++AKRELS++AM+AVFDSFVGSPLS+VADR +VDNQL+NWRKDNTFDIKGFEQGLLVGRLLFLF ++S+V L LAGY VFFV+PIIIRYGNPL+FLG
Sbjct:   59 RAASPSRGSARMLAGQDFATCSEADFRAYIIGWTFVWSGIIPYTFIASKAIQNVLGEVIGFKARSTVKEGEDATISNQSLLLYKDPIKLLDIVNIVGRFQTFDDVQDKKG--GVMSDYLFRNTFKEN-LRRSKFKGWPAGPDGQPALKDAFGGDVKAVSRTMAKRELSDTAMDAVFDSFVGSPLSLVADRFKVDNQLDNWRKDNTFDIKGFEQGLLVGRLLFLFTIVSLVGLLLAGYGVFFVQPIIIRYGNPLAFLG 312          
BLAST of mRNA_S-dermatodea_contig8.16183.1 vs. uniprot
Match: A0A835YTS8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTS8_9STRA)

HSP 1 Score: 163 bits (412), Expect = 7.110e-46
Identity = 90/225 (40.00%), Postives = 139/225 (61.78%), Query Frame = 0
Query:   39 EDDFRAYIIGWTLVWSGIIPYTFMAAKNVLGEVLTVKALPAVSKGEDSTISNQSLLLYKDPIKLLDIINIVGRFQTFDDVQTVKGKSGKMSDLLFRDTFKASTLRSRKFTGWPKGPDGQPVLQDAFDGDVKAVTRSIAKRELSESAMNAVFDSFVGSPLSIVADRQEVDNQLENWRKD-NTFDIKGFEQGLLVGRLLFLFVVLSVVALELAGYSVFFVEPIIIRY 262
            +++F   +    L + GI+PYT MA K++  +V   +ALPAV  GE+ T+SNQ LLLY +PI+L+D+INIV RF++FD++Q      G  S+ L R+ FK   L       WP   +G PV QD F     A  ++   +E+ +SA++ VFD F GS  + +ADR +V+  L++WR D  +F++  FE+ LLV R   LF+   ++ L+LA +SVFF+ P+ +R+
Sbjct:   11 QNEFNTVVGFMALAFQGILPYTIMANKSIFSDVGGFRALPAVKTGEEVTVSNQPLLLYGEPIRLIDVINIVSRFESFDELQDELRDDGNRSNYLRREYFKQKVLTLAP-KAWPADENGVPVGQDMFASTSVATLKN---KEIRDSALDVVFDVFSGSSRAYIADRFKVEYNLDSWRPDARSFNVAAFEKDLLVTRYSILFIYAVLLLLQLACWSVFFINPLALRF 231          
BLAST of mRNA_S-dermatodea_contig8.16183.1 vs. uniprot
Match: A0A7S2USE2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2USE2_9STRA)

HSP 1 Score: 97.4 bits (241), Expect = 2.070e-20
Identity = 58/160 (36.25%), Postives = 85/160 (53.12%), Query Frame = 0
Query:   76 ALPAVSKGEDSTISNQSLLLYKDPIKLLDIINIVGRFQTFDDVQTVKGKSGKMSDLLFRDTFKASTLRSRKFTGWPKGPDGQPVLQDAF-DGDVKAVTRSIAKRELSESAMNAVFDSFVGSPLSIVADRQEVDNQLENWRKDNTFDIKGFEQGLLVGRLL 234
            AL  +S  E  T+ N  LL Y + +KLLD++N+VGRFQ +D V          +  L R+ FK   +R  KF  WPK   GQ V    F + D     + +   ELSE A++AVFD+F  +  S   +R++ + Q   WR+ + FD++ FE  LL   L+
Sbjct:   67 ALMFMSDAESLTVKNNGLLKYGEDVKLLDVVNVVGRFQGWDGVWEQPPPGTFFASGLSRERFK-DKVRKEKFKSWPKDSSGQSVAAKLFPELDGPKGVKQVDSMELSEVALDAVFDTF--NSASSHTERRKAEEQFAQWRQGDVFDVEAFESNLLKANLI 223          
BLAST of mRNA_S-dermatodea_contig8.16183.1 vs. uniprot
Match: A0A7S0KA49_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus aporus TaxID=1398097 RepID=A0A7S0KA49_9STRA)

HSP 1 Score: 79.0 bits (193), Expect = 2.760e-13
Identity = 68/227 (29.96%), Postives = 104/227 (45.81%), Query Frame = 0
Query:   55 GIIPYTFMAAKNVLGEVLTVKA------LPAVSKGEDST---ISNQSLLLYKDPIKLLDIINIVGRFQTFDDVQTVKGKSGKMSDLLF----------RDTFKASTLRSRKFTGWPKGPD-GQPV----LQDAFDGDVKAVTRSIAKRELSESAMNAVFDSFVGSPLSIVADRQEVDNQLENWRKDNTFDIKGFEQGLLVGRLLFLFVVLSVVALELAGYSVFFVEP 257
            G+IP    A K +LG +L  +A      +  VS    S    I N  LL  ++P+KL D++ IVGR +    V   K       D L           R  FK   +R+ KF GWP  P  G+ V    L+  F+ +V   +  I      + A++AVFD++     S +A   +VD QL+ WR +N FD+  F    + GR +    +L+ + +++  Y   FV P
Sbjct:   86 GLIPPAIAANKLMLGTILGQRAGGDDDSVAKVSTSASSVSPDIPNSKLLFAREPVKLADVVAIVGRIRDVQSVADWKNLPSAKRDNLIDPENPPMWLPRGMFK-DNIRNAKFVGWPVDPSTGEVVGGIELKSEFEREVSKKSYPIP-----DVALDAVFDTWAWG--SGIATPDKVDVQLQAWRSNNGFDLNKFASAAVAGRSVTGAAILTFITIQVMVYGCLFVAP 304          
BLAST of mRNA_S-dermatodea_contig8.16183.1 vs. uniprot
Match: A0A7S1BLB2_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BLB2_9STRA)

HSP 1 Score: 67.0 bits (162), Expect = 4.500e-9
Identity = 62/254 (24.41%), Postives = 116/254 (45.67%), Query Frame = 0
Query:   55 GIIPYTFMAAKNVLGEVLTVKALPAVSKGEDS----------------------TISNQSLLLYKDPIKLLDIINIVGRFQTFDDV---------QTVKGKSGKMSDLLFRDTFKASTLRSRKFTGWPKGPDGQPVLQDAFDGDVKAVTRSIAKR------ELSESAMNAVFDSF-VGSPLSIVADRQEVDNQLENWRKDN-TFDIKGFEQGLLVGRLLFLFVVLSVVALELAGYSVFFVEPII-IRYGNPLSF 268
            G+IP    A   ++  +    A P   +G+ S                      T+S   LL   +P+KL+D++ ++GR    +DV         +     S      L R+T+K + +R+ K+ GWP   DG P+      G+++   RS  KR      E+S++A++ VFD++ +G+    VA   +V   L ++ K N TFD+  F+   ++GR +    +L  + +++  +   F+ P + + +G  + F
Sbjct:  103 GLIPALISANTRIIESLTRKGAAPPKEEGDPSKSLDPYAALPISYVSDSGASGPTLSCSPLLFSGEPVKLVDVLAVIGRISDVNDVARWSDLPSTKLPNVSSNNPPQWLPRNTYKVN-IRAAKWRGWPVNADGSPI----GGGELQ---RSEEKRLRQKGAEISDAALDVVFDTWALGAG---VATPDKVSEALSSYLKSNGTFDLGKFQSAAVLGRAVTAAAILFFLVIQVIAFGTLFIAPFLRVFFGIDIGF 345          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig8.16183.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5K4C0_9PHAE4.600e-12875.10Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YTS8_9STRA7.110e-4640.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2USE2_9STRA2.070e-2036.25Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S0KA49_9STRA2.760e-1329.96Hypothetical protein n=1 Tax=Leptocylindrus aporus... [more]
A0A7S1BLB2_9STRA4.500e-924.41Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 233..255
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..232
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 256..271
NoneNo IPR availableTMHMMTMhelixcoord: 233..255

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig8contigS-dermatodea_contig8:495..4153 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig8.16183.1mRNA_S-dermatodea_contig8.16183.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig8 381..4864 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig8.16183.1 ID=prot_S-dermatodea_contig8.16183.1|Name=mRNA_S-dermatodea_contig8.16183.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=272bp
MAPVAKPQRAVVAASRRGARRTSSGVRMMQGQEFATCSEDDFRAYIIGWT
LVWSGIIPYTFMAAKNVLGEVLTVKALPAVSKGEDSTISNQSLLLYKDPI
KLLDIINIVGRFQTFDDVQTVKGKSGKMSDLLFRDTFKASTLRSRKFTGW
PKGPDGQPVLQDAFDGDVKAVTRSIAKRELSESAMNAVFDSFVGSPLSIV
ADRQEVDNQLENWRKDNTFDIKGFEQGLLVGRLLFLFVVLSVVALELAGY
SVFFVEPIIIRYGNPLSFLGL*
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